RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 PRLHP81277 87 aa1.71□□□□□ -2.14
VPS8-224ENST00000488255 COL6A6A6NMZ7 2263 aa1.71□□□□□ -2.14
VPS8-224ENST00000488255 A8MTW9 85 aa1.7□□□□□ -2.14
VPS8-224ENST00000488255 SPRR1AP35321 89 aa1.7□□□□□ -2.14
VPS8-224ENST00000488255 C10orf95Q9H7T3 257 aa1.7□□□□□ -2.14
VPS8-224ENST00000488255 FBN3Q75N90 2809 aa1.7□□□□□ -2.14
VPS8-224ENST00000488255 CNTRLQ7Z7A1 2325 aa1.69□□□□□ -2.14
VPS8-224ENST00000488255 USF3Q68DE3 2245 aa1.68□□□□□ -2.14
VPS8-224ENST00000488255 RPL39P5Q59GN2 51 aa1.68□□□□□ -2.14
VPS8-224ENST00000488255 PKDREJQ9NTG1 2253 aa1.68□□□□□ -2.14
VPS8-224ENST00000488255 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
VPS8-224ENST00000488255 CLPSL2Q6UWE3 100 aa1.67□□□□□ -2.14
VPS8-224ENST00000488255 PTPRZ1P23471 2315 aaPredicted RBP1.66□□□□□ -2.14
VPS8-224ENST00000488255 KLK9Q2XQG4 91 aa1.66□□□□□ -2.14
VPS8-224ENST00000488255 ZDBF2Q9HCK1 2354 aa1.66□□□□□ -2.14
VPS8-224ENST00000488255 DEFB108AA8MXU0 73 aa1.65□□□□□ -2.15
VPS8-224ENST00000488255 H3BUX3 64 aa1.65□□□□□ -2.15
VPS8-224ENST00000488255 SPRR1BP22528 89 aa1.65□□□□□ -2.15
VPS8-224ENST00000488255 JMJD1CQ15652 2540 aa1.65□□□□□ -2.15
VPS8-224ENST00000488255 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
VPS8-224ENST00000488255 S4R3F8 94 aa1.64□□□□□ -2.15
VPS8-224ENST00000488255 PLCE1Q9P212 2302 aa1.64□□□□□ -2.15
VPS8-224ENST00000488255 PIEZO2Q9H5I5 2752 aa1.63□□□□□ -2.15
VPS8-224ENST00000488255 Q9Y3F1 56 aa1.63□□□□□ -2.15
VPS8-224ENST00000488255 ROS1P08922 2347 aa1.62□□□□□ -2.15
VPS8-224ENST00000488255 ALMS1Q8TCU4 4167 aa1.62□□□□□ -2.15
VPS8-224ENST00000488255 KRTAP21-3Q3LHN1 58 aa1.6□□□□□ -2.15
VPS8-224ENST00000488255 LELP1Q5T871 98 aa1.6□□□□□ -2.15
VPS8-224ENST00000488255 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
VPS8-224ENST00000488255 M0QZ58 72 aa1.59□□□□□ -2.15
VPS8-224ENST00000488255 SPINK1P00995 79 aa1.58□□□□□ -2.16
VPS8-224ENST00000488255 ZNF462Q96JM2 2506 aa1.58□□□□□ -2.16
VPS8-224ENST00000488255 H0YGG7 62 aa1.57□□□□□ -2.16
VPS8-224ENST00000488255 DEFB104AQ8WTQ1 72 aa1.56□□□□□ -2.16
VPS8-224ENST00000488255 COX14Q96I36 57 aa1.56□□□□□ -2.16
VPS8-224ENST00000488255 PCNX1Q96RV3 2341 aa1.56□□□□□ -2.16
VPS8-224ENST00000488255 TENM1Q9UKZ4 2725 aa1.55□□□□□ -2.16
VPS8-224ENST00000488255 C2CD3Q4AC94 2353 aa1.54□□□□□ -2.16
VPS8-224ENST00000488255 SPTBN2O15020 2390 aa1.53□□□□□ -2.16
VPS8-224ENST00000488255 CD52P31358 61 aa1.53□□□□□ -2.16
VPS8-224ENST00000488255 CACNA1HO95180 2353 aa1.52□□□□□ -2.17
VPS8-224ENST00000488255 HELZ2Q9BYK8 2649 aaKnown RBP1.51□□□□□ -2.17
VPS8-224ENST00000488255 RHPN1-AS1Q9BWJ2 59 aa1.51□□□□□ -2.17
VPS8-224ENST00000488255 IGF2RP11717 2491 aa1.51□□□□□ -2.17
VPS8-224ENST00000488255 CSPG4Q6UVK1 2322 aa1.51□□□□□ -2.17
VPS8-224ENST00000488255 A0A0D9SG42 100 aa1.5□□□□□ -2.17
VPS8-224ENST00000488255 A0A0C4DFX4 3053 aa1.5□□□□□ -2.17
VPS8-224ENST00000488255 AKAP6Q13023 2319 aa1.49□□□□□ -2.17
VPS8-224ENST00000488255 ABCA2Q9BZC7 2435 aa1.49□□□□□ -2.17
VPS8-224ENST00000488255 SPTBN1Q01082 2364 aaKnown RBP1.49□□□□□ -2.17
VPS8-224ENST00000488255 APELAP0DMC3 54 aa1.46□□□□□ -2.18
VPS8-224ENST00000488255 HTN1P15515 57 aa1.46□□□□□ -2.18
VPS8-224ENST00000488255 WNK1Q9H4A3 2382 aa1.45□□□□□ -2.18
VPS8-224ENST00000488255 SPTA1P02549 2419 aa1.45□□□□□ -2.18
VPS8-224ENST00000488255 ASH1LQ9NR48 2969 aaKnown RBP1.44□□□□□ -2.18
VPS8-224ENST00000488255 STATHP02808 62 aa1.44□□□□□ -2.18
VPS8-224ENST00000488255 DSPP15924 2871 aaKnown RBP1.44□□□□□ -2.18
VPS8-224ENST00000488255 REV3LO60673 3130 aa1.44□□□□□ -2.18
VPS8-224ENST00000488255 TNP1P09430 55 aa1.43□□□□□ -2.18
VPS8-224ENST00000488255 SPART-AS1P0CW21 52 aa1.43□□□□□ -2.18
VPS8-224ENST00000488255 C9orf92A6NGG3 77 aa1.42□□□□□ -2.18
VPS8-224ENST00000488255 DEFB135Q30KP9 77 aa1.42□□□□□ -2.18
VPS8-224ENST00000488255 DEFB110Q30KQ9 67 aa1.42□□□□□ -2.18
VPS8-224ENST00000488255 TRANK1O15050 2925 aa1.42□□□□□ -2.18
VPS8-224ENST00000488255 RP1L1Q8IWN7 2480 aaPredicted RBP1.41□□□□□ -2.18
VPS8-224ENST00000488255 ABCA12Q86UK0 2595 aa1.41□□□□□ -2.18
VPS8-224ENST00000488255 ACACAQ13085 2346 aa1.41□□□□□ -2.18
VPS8-224ENST00000488255 MEGF8Q7Z7M0 2845 aa1.4□□□□□ -2.19
VPS8-224ENST00000488255 PKD1L2Q7Z442 2459 aa1.39□□□□□ -2.19
VPS8-224ENST00000488255 F8P00451 2351 aa1.39□□□□□ -2.19
VPS8-224ENST00000488255 DEFB133Q30KQ1 61 aa1.37□□□□□ -2.19
VPS8-224ENST00000488255 DEFB124Q8NES8 71 aa1.37□□□□□ -2.19
VPS8-224ENST00000488255 DEFB108BQ8NET1 73 aa1.37□□□□□ -2.19
VPS8-224ENST00000488255 DNAH12Q6ZR08 3092 aa1.37□□□□□ -2.19
VPS8-224ENST00000488255 CEP290O15078 2479 aa1.37□□□□□ -2.19
VPS8-224ENST00000488255 UBR5O95071 2799 aaPredicted RBP1.36□□□□□ -2.19
VPS8-224ENST00000488255 H3BNG1 76 aa1.36□□□□□ -2.19
VPS8-224ENST00000488255 M0R2T5 61 aa1.36□□□□□ -2.19
VPS8-224ENST00000488255 EP400Q96L91 3159 aa1.36□□□□□ -2.19
VPS8-224ENST00000488255 CREBBPQ92793 2442 aa1.36□□□□□ -2.19
VPS8-224ENST00000488255 PCNTO95613 3336 aa1.35□□□□□ -2.19
VPS8-224ENST00000488255 SPINK6Q6UWN8 80 aa1.35□□□□□ -2.19
VPS8-224ENST00000488255 CELSR2Q9HCU4 2923 aa1.34□□□□□ -2.2
VPS8-224ENST00000488255 ZNF292O60281 2723 aa1.34□□□□□ -2.2
VPS8-224ENST00000488255 GVINP1Q7Z2Y8 2422 aa1.34□□□□□ -2.2
VPS8-224ENST00000488255 NCOR1O75376 2440 aa1.33□□□□□ -2.2
VPS8-224ENST00000488255 U3KQA8 63 aa1.33□□□□□ -2.2
VPS8-224ENST00000488255 CHD7Q9P2D1 2997 aa1.33□□□□□ -2.2
VPS8-224ENST00000488255 SRRM2Q9UQ35 2752 aaKnown RBP1.33□□□□□ -2.2
VPS8-224ENST00000488255 CENPFP49454 3210 aa1.32□□□□□ -2.2
VPS8-224ENST00000488255 APC2O95996 2303 aa1.32□□□□□ -2.2
VPS8-224ENST00000488255 DEFB1P60022 68 aa1.32□□□□□ -2.2
VPS8-224ENST00000488255 MAP1BP46821 2468 aaKnown RBP1.32□□□□□ -2.2
VPS8-224ENST00000488255 GOLGB1Q14789 3259 aaKnown RBP1.32□□□□□ -2.2
VPS8-224ENST00000488255 TTC28Q96AY4 2481 aa1.31□□□□□ -2.2
VPS8-224ENST00000488255 PRRC2CQ9Y520 2896 aaKnown RBP1.31□□□□□ -2.2
VPS8-224ENST00000488255 A0A096LNI7 61 aa1.31□□□□□ -2.2
VPS8-224ENST00000488255 NBASA2RRP1 2371 aa1.31□□□□□ -2.2
VPS8-224ENST00000488255 MGAQ8IWI9 3026 aa1.3□□□□□ -2.2
VPS8-224ENST00000488255 COL6A5A8TX70 2615 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms