RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 C5orf42Q9H799 3197 aa5.06□□□□□ -1.6
MCF2L2-212ENST00000488149 ZCCHC13Q8WW36 166 aaKnown RBP5.06□□□□□ -1.6
MCF2L2-212ENST00000488149 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.06□□□□□ -1.6
MCF2L2-212ENST00000488149 NBEAL1Q6ZS30 2694 aa5.05□□□□□ -1.6
MCF2L2-212ENST00000488149 SMR3BP02814 79 aaPredicted RBP5.05□□□□□ -1.6
MCF2L2-212ENST00000488149 TNP2Q05952 138 aa5.05□□□□□ -1.6
MCF2L2-212ENST00000488149 KRTAP1-1Q07627 177 aa5.04□□□□□ -1.6
MCF2L2-212ENST00000488149 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
MCF2L2-212ENST00000488149 CHD7Q9P2D1 2997 aa5.02□□□□□ -1.61
MCF2L2-212ENST00000488149 LINC00483Q53H64 154 aa5.02□□□□□ -1.61
MCF2L2-212ENST00000488149 Q6ZR54 194 aa5.02□□□□□ -1.61
MCF2L2-212ENST00000488149 UNC79Q9P2D8 2635 aa5.02□□□□□ -1.61
MCF2L2-212ENST00000488149 GCN1Q92616 2671 aaKnown RBP5.02□□□□□ -1.61
MCF2L2-212ENST00000488149 KRTAP26-1Q6PEX3 210 aa5.01□□□□□ -1.61
MCF2L2-212ENST00000488149 PLAC8Q9NZF1 115 aa5.01□□□□□ -1.61
MCF2L2-212ENST00000488149 J3QL48 77 aa5□□□□□ -1.61
MCF2L2-212ENST00000488149 KRTAP29-1A8MX34 341 aaPredicted RBP5□□□□□ -1.61
MCF2L2-212ENST00000488149 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
MCF2L2-212ENST00000488149 UTRNP46939 3433 aa5□□□□□ -1.61
MCF2L2-212ENST00000488149 CFAP46Q8IYW2 2715 aa5□□□□□ -1.61
MCF2L2-212ENST00000488149 ROMO1P60602 79 aa4.99□□□□□ -1.61
MCF2L2-212ENST00000488149 STAB1Q9NY15 2570 aa4.99□□□□□ -1.61
MCF2L2-212ENST00000488149 NOTCH1P46531 2555 aa4.99□□□□□ -1.61
MCF2L2-212ENST00000488149 RPL37P61927 97 aaKnown RBP4.98□□□□□ -1.61
MCF2L2-212ENST00000488149 DMBT1Q9UGM3 2413 aaPredicted RBP4.97□□□□□ -1.61
MCF2L2-212ENST00000488149 KRTAP4-16G5E9R7 235 aaPredicted RBP4.97□□□□□ -1.61
MCF2L2-212ENST00000488149 Q6ZSA8 131 aa4.97□□□□□ -1.61
MCF2L2-212ENST00000488149 S4R3F8 94 aa4.96□□□□□ -1.61
MCF2L2-212ENST00000488149 A6NN06 94 aa4.96□□□□□ -1.62
MCF2L2-212ENST00000488149 HELZ2Q9BYK8 2649 aaKnown RBP4.96□□□□□ -1.62
MCF2L2-212ENST00000488149 SPATA8Q6RVD6 105 aa4.96□□□□□ -1.62
MCF2L2-212ENST00000488149 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
MCF2L2-212ENST00000488149 LCE6AA0A183 80 aa4.94□□□□□ -1.62
MCF2L2-212ENST00000488149 LAMA2P24043 3122 aaKnown RBP4.93□□□□□ -1.62
MCF2L2-212ENST00000488149 TEX15Q9BXT5 2789 aa4.92□□□□□ -1.62
MCF2L2-212ENST00000488149 MGAQ8IWI9 3026 aa4.9□□□□□ -1.62
MCF2L2-212ENST00000488149 CHD9Q3L8U1 2897 aa4.89□□□□□ -1.63
MCF2L2-212ENST00000488149 COL6A5A8TX70 2615 aa4.89□□□□□ -1.63
MCF2L2-212ENST00000488149 NBEAL2Q6ZNJ1 2754 aa4.89□□□□□ -1.63
MCF2L2-212ENST00000488149 R4GN34 69 aa4.89□□□□□ -1.63
MCF2L2-212ENST00000488149 KRTAP1-5Q9BYS1 174 aa4.88□□□□□ -1.63
MCF2L2-212ENST00000488149 KRTAP16-1A8MUX0 517 aa4.86□□□□□ -1.63
MCF2L2-212ENST00000488149 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
MCF2L2-212ENST00000488149 TRANK1O15050 2925 aa4.85□□□□□ -1.63
MCF2L2-212ENST00000488149 MAP1AP78559 2803 aaPredicted RBP4.85□□□□□ -1.63
MCF2L2-212ENST00000488149 TEP1Q99973 2627 aaKnown RBP4.85□□□□□ -1.63
MCF2L2-212ENST00000488149 FRYQ5TBA9 3013 aa4.83□□□□□ -1.64
MCF2L2-212ENST00000488149 STAB2Q8WWQ8 2551 aa4.82□□□□□ -1.64
MCF2L2-212ENST00000488149 A0A087X002 238 aa4.81□□□□□ -1.64
MCF2L2-212ENST00000488149 NOTCH2NLQ7Z3S9 236 aa4.81□□□□□ -1.64
MCF2L2-212ENST00000488149 A8MU10 97 aa4.81□□□□□ -1.64
MCF2L2-212ENST00000488149 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
MCF2L2-212ENST00000488149 ZNF292O60281 2723 aa4.8□□□□□ -1.64
MCF2L2-212ENST00000488149 SETXQ7Z333 2677 aaKnown RBP4.8□□□□□ -1.64
MCF2L2-212ENST00000488149 TRIOO75962 3097 aa4.8□□□□□ -1.64
MCF2L2-212ENST00000488149 PANO1I0J062 215 aa4.79□□□□□ -1.64
MCF2L2-212ENST00000488149 M0QZ58 72 aa4.79□□□□□ -1.64
MCF2L2-212ENST00000488149 ITPR1Q14643 2758 aa4.79□□□□□ -1.64
MCF2L2-212ENST00000488149 HTTP42858 3142 aa4.79□□□□□ -1.64
MCF2L2-212ENST00000488149 RANBP2P49792 3224 aaKnown RBP4.78□□□□□ -1.64
MCF2L2-212ENST00000488149 MKI67P46013 3256 aaKnown RBP4.78□□□□□ -1.64
MCF2L2-212ENST00000488149 FREM2Q5SZK8 3169 aa4.78□□□□□ -1.64
MCF2L2-212ENST00000488149 WDFY4Q6ZS81 3184 aa4.78□□□□□ -1.64
MCF2L2-212ENST00000488149 VPS13AQ96RL7 3174 aa4.77□□□□□ -1.65
MCF2L2-212ENST00000488149 DSPP15924 2871 aaKnown RBP4.77□□□□□ -1.65
MCF2L2-212ENST00000488149 BAHCC1Q9P281 2608 aa4.75□□□□□ -1.65
MCF2L2-212ENST00000488149 KALRNO60229 2985 aa4.75□□□□□ -1.65
MCF2L2-212ENST00000488149 UBR5O95071 2799 aaPredicted RBP4.74□□□□□ -1.65
MCF2L2-212ENST00000488149 KRTAP10-1P60331 282 aa4.73□□□□□ -1.65
MCF2L2-212ENST00000488149 SEC61BP60468 96 aaKnown RBP4.73□□□□□ -1.65
MCF2L2-212ENST00000488149 M0R2T5 61 aa4.73□□□□□ -1.65
MCF2L2-212ENST00000488149 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
MCF2L2-212ENST00000488149 KRTAP7-1Q8IUC3 87 aa4.72□□□□□ -1.65
MCF2L2-212ENST00000488149 APCP25054 2843 aa4.72□□□□□ -1.65
MCF2L2-212ENST00000488149 KRTAP11-1Q8IUC1 163 aa4.72□□□□□ -1.65
MCF2L2-212ENST00000488149 KRTAP10-2P60368 255 aa4.71□□□□□ -1.66
MCF2L2-212ENST00000488149 NBEAQ8NFP9 2946 aa4.71□□□□□ -1.66
MCF2L2-212ENST00000488149 NSD1Q96L73 2696 aaPredicted RBP4.7□□□□□ -1.66
MCF2L2-212ENST00000488149 LAMA3Q16787 3333 aa4.7□□□□□ -1.66
MCF2L2-212ENST00000488149 RPS29P62273 56 aaKnown RBP4.69□□□□□ -1.66
MCF2L2-212ENST00000488149 KRTAP13-1Q8IUC0 172 aa4.68□□□□□ -1.66
MCF2L2-212ENST00000488149 ITPR2Q14571 2701 aa4.66□□□□□ -1.66
MCF2L2-212ENST00000488149 PRUNE2Q8WUY3 3088 aa4.66□□□□□ -1.66
MCF2L2-212ENST00000488149 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
MCF2L2-212ENST00000488149 A8MUU9 505 aa4.65□□□□□ -1.66
MCF2L2-212ENST00000488149 ASH1LQ9NR48 2969 aaKnown RBP4.65□□□□□ -1.67
MCF2L2-212ENST00000488149 XIRP2A4UGR9 3374 aa4.65□□□□□ -1.67
MCF2L2-212ENST00000488149 KMT2BQ9UMN6 2715 aaPredicted RBP4.64□□□□□ -1.67
MCF2L2-212ENST00000488149 Q5VSD8 79 aa4.64□□□□□ -1.67
MCF2L2-212ENST00000488149 CELSR3Q9NYQ7 3312 aa4.63□□□□□ -1.67
MCF2L2-212ENST00000488149 Q6ZRN7 208 aaPredicted RBP4.62□□□□□ -1.67
MCF2L2-212ENST00000488149 IGSF10Q6WRI0 2623 aa4.62□□□□□ -1.67
MCF2L2-212ENST00000488149 BRCA2P51587 3418 aa4.61□□□□□ -1.67
MCF2L2-212ENST00000488149 UTP20O75691 2785 aaKnown RBP4.6□□□□□ -1.67
MCF2L2-212ENST00000488149 KRTAP13-2Q52LG2 175 aa4.6□□□□□ -1.67
MCF2L2-212ENST00000488149 DMXL2Q8TDJ6 3036 aa4.6□□□□□ -1.67
MCF2L2-212ENST00000488149 UNC80Q8N2C7 3258 aa4.6□□□□□ -1.67
MCF2L2-212ENST00000488149 LRBAP50851 2863 aa4.59□□□□□ -1.67
MCF2L2-212ENST00000488149 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
MCF2L2-212ENST00000488149 FRYLO94915 3013 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms