RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 S100A7L2Q5SY68 101 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 LINC00269Q8N2A0 174 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 Q8N8P6 123 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 PPDPFLQ8WWR9 84 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 CLEC2BQ92478 149 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 IGKV2-28A0A075B6P5 120 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 A0A0B4J2C4 111 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 TRBV7-7A0A0K0K1E9 115 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 A6NED7 52 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 H3BQ85 93 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 IGKV2D-28P01615 120 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 KRTAP10-7P60409 375 aaPredicted RBP1.89□□□□□ -2.11
GPNMB-212ENST00000487890 MIAQ16674 131 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 MRPL51Q4U2R6 128 aaKnown RBP1.89□□□□□ -2.11
GPNMB-212ENST00000487890 LYZL1Q6UWQ5 148 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 CYSTM1Q9H1C7 97 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 TMEM242Q9NWH2 141 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 TRAPPC1Q9Y5R8 145 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 DNAH8Q96JB1 4490 aa1.89□□□□□ -2.11
GPNMB-212ENST00000487890 C19orf71A6NCJ1 209 aa1.88□□□□□ -2.11
GPNMB-212ENST00000487890 F2Z2F3 143 aa1.88□□□□□ -2.11
GPNMB-212ENST00000487890 SYS1-DBNDD2H3BUS1 97 aa1.88□□□□□ -2.11
GPNMB-212ENST00000487890 M0QY20 66 aa1.88□□□□□ -2.11
GPNMB-212ENST00000487890 CKS2P33552 79 aa1.88□□□□□ -2.11
GPNMB-212ENST00000487890 RPL37AP61513 92 aaKnown RBP1.88□□□□□ -2.11
GPNMB-212ENST00000487890 HIST1H4AP62805 103 aaKnown RBP1.88□□□□□ -2.11
GPNMB-212ENST00000487890 ENHOQ6UWT2 76 aa1.88□□□□□ -2.11
GPNMB-212ENST00000487890 TMEM136Q6ZRR5 245 aa1.88□□□□□ -2.11
GPNMB-212ENST00000487890 Q6ZSA8 131 aa1.88□□□□□ -2.11
GPNMB-212ENST00000487890 RETNLBQ9BQ08 111 aa1.88□□□□□ -2.11
GPNMB-212ENST00000487890 LINC00474Q9P2X8 69 aa1.88□□□□□ -2.11
GPNMB-212ENST00000487890 IGHV3-64A0A075B6Q5 118 aa1.87□□□□□ -2.11
GPNMB-212ENST00000487890 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.87□□□□□ -2.11
GPNMB-212ENST00000487890 IGKV2-24A0A0C4DH68 120 aa1.87□□□□□ -2.11
GPNMB-212ENST00000487890 IGKV2-29A2NJV5 120 aaPredicted RBP1.87□□□□□ -2.11
GPNMB-212ENST00000487890 ATOX1O00244 68 aa1.87□□□□□ -2.11
GPNMB-212ENST00000487890 MRPS36P82909 103 aaKnown RBP1.87□□□□□ -2.11
GPNMB-212ENST00000487890 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
GPNMB-212ENST00000487890 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
GPNMB-212ENST00000487890 C5orf38Q86SI9 138 aa1.87□□□□□ -2.11
GPNMB-212ENST00000487890 CHCHD1Q96BP2 118 aaKnown RBP1.87□□□□□ -2.11
GPNMB-212ENST00000487890 RPL39LQ96EH5 51 aaKnown RBP1.87□□□□□ -2.11
GPNMB-212ENST00000487890 SCGB3A1Q96QR1 104 aa1.87□□□□□ -2.11
GPNMB-212ENST00000487890 SMIM7Q9BQ49 75 aa1.87□□□□□ -2.11
GPNMB-212ENST00000487890 PRO0461Q9UI25 63 aa1.87□□□□□ -2.11
GPNMB-212ENST00000487890 LRP1Q07954 4544 aaKnown RBP1.87□□□□□ -2.11
GPNMB-212ENST00000487890 FAT3Q8TDW7 4589 aa1.86□□□□□ -2.11
GPNMB-212ENST00000487890 TRBV24-1A0A075B6N3 115 aa1.86□□□□□ -2.11
GPNMB-212ENST00000487890 LOC107984156A0A0G2JMH3 177 aa1.86□□□□□ -2.11
GPNMB-212ENST00000487890 A0A1B0GUT8 65 aa1.86□□□□□ -2.11
GPNMB-212ENST00000487890 SDHAF1A6NFY7 115 aa1.86□□□□□ -2.11
GPNMB-212ENST00000487890 CCKP06307 115 aa1.86□□□□□ -2.11
GPNMB-212ENST00000487890 FCER1GP30273 86 aa1.86□□□□□ -2.11
GPNMB-212ENST00000487890 XCL1P47992 114 aa1.86□□□□□ -2.11
GPNMB-212ENST00000487890 ARL17AQ8IVW1 177 aa1.86□□□□□ -2.11
GPNMB-212ENST00000487890 C18orf32Q8TCD1 76 aa1.86□□□□□ -2.11
GPNMB-212ENST00000487890 IMMP2LQ96T52 175 aa1.86□□□□□ -2.11
GPNMB-212ENST00000487890 IGKV2D-26A0A0A0MRZ7 120 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 A0A1B0GW54 56 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 HIGD1CA8MV81 97 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 I3L3M4 83 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 SLC25A20O43772 301 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 ATP5EP56381 51 aaPredicted RBP1.85□□□□□ -2.11
GPNMB-212ENST00000487890 CNBPP62633 177 aaKnown RBP1.85□□□□□ -2.11
GPNMB-212ENST00000487890 COX6A2Q02221 97 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 FAM229BQ4G0N7 80 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 KRTAP26-1Q6PEX3 210 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 ATP11AUNQ6ZP68 121 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 C2orf91Q6ZV80 131 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 FAM19A2Q8N3H0 131 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 C9orf163Q8N9P6 203 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 NXT2Q9NPJ8 142 aaKnown RBP1.85□□□□□ -2.11
GPNMB-212ENST00000487890 HIGD1BQ9P298 99 aa1.85□□□□□ -2.11
GPNMB-212ENST00000487890 RPL28P46779 137 aaKnown RBP1.84□□□□□ -2.11
GPNMB-212ENST00000487890 KRTAP12-2P59991 146 aa1.84□□□□□ -2.11
GPNMB-212ENST00000487890 PMCHL1Q16048 86 aa1.84□□□□□ -2.11
GPNMB-212ENST00000487890 KRTAP13-2Q52LG2 175 aa1.84□□□□□ -2.11
GPNMB-212ENST00000487890 LCE1EQ5T753 118 aa1.84□□□□□ -2.11
GPNMB-212ENST00000487890 SDIM1Q6ZPB5 146 aa1.84□□□□□ -2.11
GPNMB-212ENST00000487890 SERP2Q8N6R1 65 aa1.84□□□□□ -2.11
GPNMB-212ENST00000487890 C1orf64Q8NEQ6 169 aa1.84□□□□□ -2.11
GPNMB-212ENST00000487890 SPACA4Q8TDM5 124 aa1.84□□□□□ -2.11
GPNMB-212ENST00000487890 CNFNQ9BYD5 112 aa1.84□□□□□ -2.11
GPNMB-212ENST00000487890 A0A096LNI7 61 aa1.83□□□□□ -2.12
GPNMB-212ENST00000487890 GVQW2A0A096LPI5 108 aaPredicted RBP1.83□□□□□ -2.12
GPNMB-212ENST00000487890 TRBV6-5A0A0K0K1A5 114 aa1.83□□□□□ -2.12
GPNMB-212ENST00000487890 LINC00959A0A1B0GUT2 108 aa1.83□□□□□ -2.12
GPNMB-212ENST00000487890 PPP1R17O96001 155 aa1.83□□□□□ -2.12
GPNMB-212ENST00000487890 ZNF22P17026 224 aaPredicted RBP1.83□□□□□ -2.12
GPNMB-212ENST00000487890 KRTAP25-1Q3LHN0 102 aa1.83□□□□□ -2.12
GPNMB-212ENST00000487890 XAGE1AQ9HD64 81 aa1.83□□□□□ -2.12
GPNMB-212ENST00000487890 PLAC8Q9NZF1 115 aa1.83□□□□□ -2.12
GPNMB-212ENST00000487890 NDUFA12Q9UI09 145 aa1.83□□□□□ -2.12
GPNMB-212ENST00000487890 D6R8Y8 96 aa1.82□□□□□ -2.12
GPNMB-212ENST00000487890 NPYP01303 97 aa1.82□□□□□ -2.12
GPNMB-212ENST00000487890 KRTAP10-4P60372 401 aaPredicted RBP1.82□□□□□ -2.12
GPNMB-212ENST00000487890 KRTDAPP60985 99 aa1.82□□□□□ -2.12
GPNMB-212ENST00000487890 RPL39P62891 51 aaKnown RBP1.82□□□□□ -2.12
GPNMB-212ENST00000487890 SPAG11BQ08648 103 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms