RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 Q6JHZ5 121 aa12.68□□□□□ -0.38
PLOD3-215ENST00000487563 HIST1H4GQ99525 98 aa12.68□□□□□ -0.38
PLOD3-215ENST00000487563 RPL37P61927 97 aaKnown RBP12.67□□□□□ -0.38
PLOD3-215ENST00000487563 SCGB1D1O95968 90 aa12.66□□□□□ -0.38
PLOD3-215ENST00000487563 CLEC2BQ92478 149 aa12.66□□□□□ -0.38
PLOD3-215ENST00000487563 KRTAP19-2Q3LHN2 52 aa12.65□□□□□ -0.38
PLOD3-215ENST00000487563 BVES-AS1Q5T3Y7 98 aa12.64□□□□□ -0.39
PLOD3-215ENST00000487563 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.64□□□□□ -0.39
PLOD3-215ENST00000487563 S100A1P23297 94 aa12.62□□□□□ -0.39
PLOD3-215ENST00000487563 OCIAD2Q56VL3 154 aa12.62□□□□□ -0.39
PLOD3-215ENST00000487563 IGFL1Q6UW32 110 aa12.62□□□□□ -0.39
PLOD3-215ENST00000487563 TRBV7-7A0A0K0K1E9 115 aa12.61□□□□□ -0.39
PLOD3-215ENST00000487563 MT1HP80294 61 aa12.6□□□□□ -0.39
PLOD3-215ENST00000487563 COX8AP10176 69 aa12.59□□□□□ -0.39
PLOD3-215ENST00000487563 LCE2DQ5TA82 110 aaPredicted RBP12.59□□□□□ -0.39
PLOD3-215ENST00000487563 PPDPFLQ8WWR9 84 aa12.59□□□□□ -0.39
PLOD3-215ENST00000487563 SNHG12Q9BXW3 62 aa12.59□□□□□ -0.39
PLOD3-215ENST00000487563 CFC1BP0CG36 223 aa12.56□□□□□ -0.4
PLOD3-215ENST00000487563 COX6B2Q6YFQ2 88 aa12.53□□□□□ -0.4
PLOD3-215ENST00000487563 RAB37Q96AX2 223 aa12.53□□□□□ -0.4
PLOD3-215ENST00000487563 H3BUT2 72 aa12.52□□□□□ -0.41
PLOD3-215ENST00000487563 DLEU1O43261 78 aa12.52□□□□□ -0.41
PLOD3-215ENST00000487563 SNCGO76070 127 aa12.52□□□□□ -0.41
PLOD3-215ENST00000487563 CFC1P0CG37 223 aa12.49□□□□□ -0.41
PLOD3-215ENST00000487563 C14orf144Q96I85 54 aa12.49□□□□□ -0.41
PLOD3-215ENST00000487563 LST1O00453 97 aa12.48□□□□□ -0.41
PLOD3-215ENST00000487563 OBSCN-AS1Q96MR7 158 aa12.48□□□□□ -0.41
PLOD3-215ENST00000487563 M0R2T5 61 aa12.46□□□□□ -0.41
PLOD3-215ENST00000487563 PAM16Q9Y3D7 125 aa12.46□□□□□ -0.41
PLOD3-215ENST00000487563 H0YGX0 51 aa12.45□□□□□ -0.42
PLOD3-215ENST00000487563 SPATA45Q537H7 98 aa12.45□□□□□ -0.42
PLOD3-215ENST00000487563 A0A0B4J2C4 111 aa12.44□□□□□ -0.42
PLOD3-215ENST00000487563 HIGD1BQ9P298 99 aa12.44□□□□□ -0.42
PLOD3-215ENST00000487563 SS18L2Q9UHA2 77 aa12.44□□□□□ -0.42
PLOD3-215ENST00000487563 ATP11AUNQ6ZP68 121 aa12.43□□□□□ -0.42
PLOD3-215ENST00000487563 Q75L30 129 aa12.41□□□□□ -0.42
PLOD3-215ENST00000487563 VAMP8Q9BV40 100 aa12.41□□□□□ -0.42
PLOD3-215ENST00000487563 FAM218AQ96MZ4 157 aa12.4□□□□□ -0.42
PLOD3-215ENST00000487563 NDUFV3P56181 108 aaKnown RBP12.39□□□□□ -0.43
PLOD3-215ENST00000487563 KRTAP10-6P60371 365 aaPredicted RBP12.39□□□□□ -0.43
PLOD3-215ENST00000487563 Q6Q795 121 aa12.38□□□□□ -0.43
PLOD3-215ENST00000487563 LORP23490 312 aaPredicted RBP12.37□□□□□ -0.43
PLOD3-215ENST00000487563 C2orf91Q6ZV80 131 aa12.37□□□□□ -0.43
PLOD3-215ENST00000487563 TEN1Q86WV5 123 aa12.37□□□□□ -0.43
PLOD3-215ENST00000487563 Q96NJ1 140 aa12.37□□□□□ -0.43
PLOD3-215ENST00000487563 GHRHP01286 108 aa12.36□□□□□ -0.43
PLOD3-215ENST00000487563 CRCT1Q9UGL9 99 aa12.36□□□□□ -0.43
PLOD3-215ENST00000487563 TMEM238LA0A1B0GVL6 79 aa12.35□□□□□ -0.43
PLOD3-215ENST00000487563 A6NJY4 79 aa12.35□□□□□ -0.43
PLOD3-215ENST00000487563 CEND1Q8N111 149 aa12.35□□□□□ -0.43
PLOD3-215ENST00000487563 PRO1854Q9UHT4 67 aa12.34□□□□□ -0.43
PLOD3-215ENST00000487563 H3BMG7 143 aa12.33□□□□□ -0.44
PLOD3-215ENST00000487563 FABP2P12104 132 aa12.33□□□□□ -0.44
PLOD3-215ENST00000487563 A0A087WSZ3 146 aa12.32□□□□□ -0.44
PLOD3-215ENST00000487563 A0A1B0GX51 115 aa12.32□□□□□ -0.44
PLOD3-215ENST00000487563 FSIP2Q5CZC0 6907 aa12.3□□□□□ -0.44
PLOD3-215ENST00000487563 FLGP20930 4061 aaPredicted RBP12.27□□□□□ -0.45
PLOD3-215ENST00000487563 FXYD2P54710 66 aa12.26□□□□□ -0.45
PLOD3-215ENST00000487563 TRIAP1O43715 76 aa12.25□□□□□ -0.45
PLOD3-215ENST00000487563 C20orf166-AS1Q96NR2 134 aa12.24□□□□□ -0.45
PLOD3-215ENST00000487563 SIGMAR1Q99720 223 aa12.23□□□□□ -0.45
PLOD3-215ENST00000487563 DNAL4O96015 105 aa12.22□□□□□ -0.45
PLOD3-215ENST00000487563 A8MUU9 505 aa12.2□□□□□ -0.46
PLOD3-215ENST00000487563 A0A1W2PNM2 257 aa12.19□□□□□ -0.46
PLOD3-215ENST00000487563 PSMB2P49721 201 aa12.19□□□□□ -0.46
PLOD3-215ENST00000487563 DSCR10P59022 87 aa12.19□□□□□ -0.46
PLOD3-215ENST00000487563 A0A1B0GV72 72 aa12.18□□□□□ -0.46
PLOD3-215ENST00000487563 ORMDL1Q9P0S3 153 aa12.18□□□□□ -0.46
PLOD3-215ENST00000487563 ANKRD29Q8N6D5 301 aa12.17□□□□□ -0.46
PLOD3-215ENST00000487563 HSD52Q0P140 79 aa12.16□□□□□ -0.46
PLOD3-215ENST00000487563 H3BQ85 93 aa12.15□□□□□ -0.46
PLOD3-215ENST00000487563 TRBV20-1A0A075B6N2 111 aa12.14□□□□□ -0.47
PLOD3-215ENST00000487563 K7ERJ3 54 aa12.13□□□□□ -0.47
PLOD3-215ENST00000487563 COX6CP09669 75 aa12.13□□□□□ -0.47
PLOD3-215ENST00000487563 TRBV7-4A0A0J9YYF1 115 aa12.12□□□□□ -0.47
PLOD3-215ENST00000487563 IGKV4-1P06312 121 aa12.12□□□□□ -0.47
PLOD3-215ENST00000487563 TMEM256-PLSCR3K7ERE1 68 aa12.1□□□□□ -0.47
PLOD3-215ENST00000487563 LINC00313P59037 77 aa12.1□□□□□ -0.47
PLOD3-215ENST00000487563 PYY3Q5JQD4 70 aa12.08□□□□□ -0.48
PLOD3-215ENST00000487563 TRACP01848 142 aa12.06□□□□□ -0.48
PLOD3-215ENST00000487563 CCKP06307 115 aa12.06□□□□□ -0.48
PLOD3-215ENST00000487563 DEFB116Q30KQ4 102 aa12.03□□□□□ -0.48
PLOD3-215ENST00000487563 KRTAP16-1A8MUX0 517 aa12□□□□□ -0.49
PLOD3-215ENST00000487563 UBE2V1Q13404 147 aa12□□□□□ -0.49
PLOD3-215ENST00000487563 UQCR10Q9UDW1 63 aa12□□□□□ -0.49
PLOD3-215ENST00000487563 IGHV6-1A0A0B4J1U7 121 aa11.98□□□□□ -0.49
PLOD3-215ENST00000487563 FAM236DA0A1B0GTK5 79 aa11.98□□□□□ -0.49
PLOD3-215ENST00000487563 FAM236CP0DP71 79 aa11.98□□□□□ -0.49
PLOD3-215ENST00000487563 VPS25Q9BRG1 176 aa11.98□□□□□ -0.49
PLOD3-215ENST00000487563 LINC00472Q9H8W2 130 aa11.98□□□□□ -0.49
PLOD3-215ENST00000487563 SCGB1C2P0DMR2 95 aa11.96□□□□□ -0.49
PLOD3-215ENST00000487563 NOTCH2NLQ7Z3S9 236 aa11.96□□□□□ -0.49
PLOD3-215ENST00000487563 RBM3P98179 157 aaKnown RBP11.92□□□□□ -0.5
PLOD3-215ENST00000487563 DSCR8Q96T75 97 aa11.92□□□□□ -0.5
PLOD3-215ENST00000487563 TMA7Q9Y2S6 64 aaKnown RBP11.91□□□□□ -0.5
PLOD3-215ENST00000487563 RBM12B-AS1Q9P1G2 102 aa11.9□□□□□ -0.5
PLOD3-215ENST00000487563 C8orf87E5RJ46 101 aa11.88□□□□□ -0.51
PLOD3-215ENST00000487563 A0A1B0GVX0 72 aa11.87□□□□□ -0.51
PLOD3-215ENST00000487563 KRTAP9-8Q9BYQ0 159 aa11.87□□□□□ -0.51
PLOD3-215ENST00000487563 C9JAW5 83 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms