RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 HIST1H2BLQ99880 126 aa3.63□□□□□ -1.83
CTDSPL-208ENST00000486978 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
CTDSPL-208ENST00000486978 TRBV7-6A0A0J9YX20 115 aa3.62□□□□□ -1.83
CTDSPL-208ENST00000486978 S100A6P06703 90 aa3.62□□□□□ -1.83
CTDSPL-208ENST00000486978 SPRR1BP22528 89 aa3.62□□□□□ -1.83
CTDSPL-208ENST00000486978 KRTAP10-6P60371 365 aaPredicted RBP3.62□□□□□ -1.83
CTDSPL-208ENST00000486978 SLC25A34Q6PIV7 304 aa3.62□□□□□ -1.83
CTDSPL-208ENST00000486978 MUSTN1Q8IVN3 82 aa3.62□□□□□ -1.83
CTDSPL-208ENST00000486978 Q8N377 158 aa3.62□□□□□ -1.83
CTDSPL-208ENST00000486978 A0A1B0GWB2 263 aa3.61□□□□□ -1.83
CTDSPL-208ENST00000486978 A6NDN8 102 aa3.61□□□□□ -1.83
CTDSPL-208ENST00000486978 HSBP1L1C9JCN9 74 aa3.61□□□□□ -1.83
CTDSPL-208ENST00000486978 SLC25A20O43772 301 aa3.61□□□□□ -1.83
CTDSPL-208ENST00000486978 KRTAP3-1Q9BYR8 98 aa3.61□□□□□ -1.83
CTDSPL-208ENST00000486978 LAMTOR3Q9UHA4 124 aa3.61□□□□□ -1.83
CTDSPL-208ENST00000486978 MACF1Q9UPN3 7388 aaKnown RBP3.61□□□□□ -1.83
CTDSPL-208ENST00000486978 TRAV13-2A0A0B4J235 113 aa3.6□□□□□ -1.83
CTDSPL-208ENST00000486978 TAL2Q16559 108 aa3.6□□□□□ -1.83
CTDSPL-208ENST00000486978 KRTAP13-3Q3SY46 172 aa3.6□□□□□ -1.83
CTDSPL-208ENST00000486978 TEX49A0A1B0GTD5 131 aa3.59□□□□□ -1.83
CTDSPL-208ENST00000486978 A4D1N5 150 aa3.59□□□□□ -1.83
CTDSPL-208ENST00000486978 DEFB105AQ8NG35 78 aa3.59□□□□□ -1.83
CTDSPL-208ENST00000486978 SMIM11BQ8TCY0 68 aa3.59□□□□□ -1.83
CTDSPL-208ENST00000486978 Q1RN00 199 aa3.58□□□□□ -1.84
CTDSPL-208ENST00000486978 LIMD2Q9BT23 127 aa3.58□□□□□ -1.84
CTDSPL-208ENST00000486978 NHP2Q9NX24 153 aaKnown RBP3.58□□□□□ -1.84
CTDSPL-208ENST00000486978 IGLV5-48A0A075B6I7 105 aa3.57□□□□□ -1.84
CTDSPL-208ENST00000486978 SCGB1D1O95968 90 aa3.57□□□□□ -1.84
CTDSPL-208ENST00000486978 HRCT1Q6UXD1 115 aa3.57□□□□□ -1.84
CTDSPL-208ENST00000486978 PRO1933Q9H354 126 aa3.57□□□□□ -1.84
CTDSPL-208ENST00000486978 COX8AP10176 69 aa3.56□□□□□ -1.84
CTDSPL-208ENST00000486978 CD164Q04900 197 aa3.56□□□□□ -1.84
CTDSPL-208ENST00000486978 VAMP3Q15836 100 aa3.56□□□□□ -1.84
CTDSPL-208ENST00000486978 SMIM29Q86T20 159 aa3.56□□□□□ -1.84
CTDSPL-208ENST00000486978 H7C2G1 150 aa3.55□□□□□ -1.84
CTDSPL-208ENST00000486978 ASB16-AS1Q495Z4 193 aa3.55□□□□□ -1.84
CTDSPL-208ENST00000486978 LINC00575Q6W349 94 aa3.55□□□□□ -1.84
CTDSPL-208ENST00000486978 HIST1H4GQ99525 98 aa3.55□□□□□ -1.84
CTDSPL-208ENST00000486978 DLEU1O43261 78 aa3.54□□□□□ -1.84
CTDSPL-208ENST00000486978 SEC61BP60468 96 aaKnown RBP3.54□□□□□ -1.84
CTDSPL-208ENST00000486978 hADV29S1A0JD25 119 aa3.53□□□□□ -1.84
CTDSPL-208ENST00000486978 F8WEM9 126 aa3.53□□□□□ -1.84
CTDSPL-208ENST00000486978 Q5XG85 94 aa3.53□□□□□ -1.84
CTDSPL-208ENST00000486978 Q6ZQY7 126 aa3.53□□□□□ -1.84
CTDSPL-208ENST00000486978 C12orf57Q99622 126 aa3.53□□□□□ -1.84
CTDSPL-208ENST00000486978 A0A0G2JQZ4 141 aa3.52□□□□□ -1.85
CTDSPL-208ENST00000486978 CFC1BP0CG36 223 aa3.52□□□□□ -1.85
CTDSPL-208ENST00000486978 SPATA45Q537H7 98 aa3.52□□□□□ -1.85
CTDSPL-208ENST00000486978 BVES-AS1Q5T3Y7 98 aa3.52□□□□□ -1.85
CTDSPL-208ENST00000486978 C14orf144Q96I85 54 aa3.52□□□□□ -1.85
CTDSPL-208ENST00000486978 VAMP8Q9BV40 100 aa3.52□□□□□ -1.85
CTDSPL-208ENST00000486978 HIGD1BQ9P298 99 aa3.52□□□□□ -1.85
CTDSPL-208ENST00000486978 PAM16Q9Y3D7 125 aa3.52□□□□□ -1.85
CTDSPL-208ENST00000486978 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.51□□□□□ -1.85
CTDSPL-208ENST00000486978 IGLV8-61A0A075B6I0 122 aa3.5□□□□□ -1.85
CTDSPL-208ENST00000486978 A0A0B4J2C4 111 aa3.5□□□□□ -1.85
CTDSPL-208ENST00000486978 C9orf92A6NGG3 77 aa3.5□□□□□ -1.85
CTDSPL-208ENST00000486978 TCL1BO95988 128 aa3.5□□□□□ -1.85
CTDSPL-208ENST00000486978 CFC1P0CG37 223 aa3.5□□□□□ -1.85
CTDSPL-208ENST00000486978 C1orf195Q5TG92 126 aa3.5□□□□□ -1.85
CTDSPL-208ENST00000486978 Q6JHZ5 121 aa3.5□□□□□ -1.85
CTDSPL-208ENST00000486978 C2orf91Q6ZV80 131 aa3.5□□□□□ -1.85
CTDSPL-208ENST00000486978 PPDPFLQ8WWR9 84 aa3.5□□□□□ -1.85
CTDSPL-208ENST00000486978 RAB37Q96AX2 223 aa3.5□□□□□ -1.85
CTDSPL-208ENST00000486978 IGFL1Q6UW32 110 aa3.49□□□□□ -1.85
CTDSPL-208ENST00000486978 CLEC2BQ92478 149 aa3.49□□□□□ -1.85
CTDSPL-208ENST00000486978 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
CTDSPL-208ENST00000486978 H0YGX0 51 aa3.48□□□□□ -1.85
CTDSPL-208ENST00000486978 SNCGO76070 127 aa3.48□□□□□ -1.85
CTDSPL-208ENST00000486978 OCIAD2Q56VL3 154 aa3.48□□□□□ -1.85
CTDSPL-208ENST00000486978 CEND1Q8N111 149 aa3.48□□□□□ -1.85
CTDSPL-208ENST00000486978 SNHG12Q9BXW3 62 aa3.48□□□□□ -1.85
CTDSPL-208ENST00000486978 NEBP20929 6669 aa3.47□□□□□ -1.85
CTDSPL-208ENST00000486978 TRBV7-7A0A0K0K1E9 115 aa3.47□□□□□ -1.85
CTDSPL-208ENST00000486978 H3BUT2 72 aa3.46□□□□□ -1.86
CTDSPL-208ENST00000486978 FXYD2P54710 66 aa3.46□□□□□ -1.86
CTDSPL-208ENST00000486978 PCOTHQ58A44 107 aa3.46□□□□□ -1.86
CTDSPL-208ENST00000486978 PYY3Q5JQD4 70 aa3.46□□□□□ -1.86
CTDSPL-208ENST00000486978 FAM218AQ96MZ4 157 aa3.46□□□□□ -1.86
CTDSPL-208ENST00000486978 PRO1854Q9UHT4 67 aa3.46□□□□□ -1.86
CTDSPL-208ENST00000486978 A0A1B0GX51 115 aa3.45□□□□□ -1.86
CTDSPL-208ENST00000486978 TRIAP1O43715 76 aa3.44□□□□□ -1.86
CTDSPL-208ENST00000486978 NDUFV3P56181 108 aaKnown RBP3.44□□□□□ -1.86
CTDSPL-208ENST00000486978 RPL37P61927 97 aaKnown RBP3.44□□□□□ -1.86
CTDSPL-208ENST00000486978 HSD52Q0P140 79 aa3.44□□□□□ -1.86
CTDSPL-208ENST00000486978 Q6Q795 121 aa3.43□□□□□ -1.86
CTDSPL-208ENST00000486978 TEN1Q86WV5 123 aa3.43□□□□□ -1.86
CTDSPL-208ENST00000486978 SS18L2Q9UHA2 77 aa3.43□□□□□ -1.86
CTDSPL-208ENST00000486978 H3BMG7 143 aa3.42□□□□□ -1.86
CTDSPL-208ENST00000486978 M0R2T5 61 aa3.42□□□□□ -1.86
CTDSPL-208ENST00000486978 LST1O00453 97 aa3.42□□□□□ -1.86
CTDSPL-208ENST00000486978 FABP2P12104 132 aa3.42□□□□□ -1.86
CTDSPL-208ENST00000486978 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
CTDSPL-208ENST00000486978 K7ERJ3 54 aa3.41□□□□□ -1.86
CTDSPL-208ENST00000486978 DNAL4O96015 105 aa3.41□□□□□ -1.86
CTDSPL-208ENST00000486978 PSMB2P49721 201 aa3.41□□□□□ -1.86
CTDSPL-208ENST00000486978 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
CTDSPL-208ENST00000486978 UQCR10Q9UDW1 63 aa3.41□□□□□ -1.86
CTDSPL-208ENST00000486978 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
CTDSPL-208ENST00000486978 A0A087WSZ3 146 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms