RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 NDUFA6P56556 154 aa2.16□□□□□ -2.06
SNRNP40-205ENST00000486941 LINC00158P58513 81 aa2.16□□□□□ -2.06
SNRNP40-205ENST00000486941 OCIAD2Q56VL3 154 aa2.16□□□□□ -2.06
SNRNP40-205ENST00000486941 TMEM170BQ5T4T1 132 aa2.16□□□□□ -2.06
SNRNP40-205ENST00000486941 ETDCA0A1B0GVM5 59 aa2.15□□□□□ -2.07
SNRNP40-205ENST00000486941 HBDP02042 147 aa2.15□□□□□ -2.07
SNRNP40-205ENST00000486941 TRGC2P03986 189 aa2.15□□□□□ -2.07
SNRNP40-205ENST00000486941 FABP4P15090 132 aa2.15□□□□□ -2.07
SNRNP40-205ENST00000486941 COL5A1-AS1Q5SY13 56 aa2.15□□□□□ -2.07
SNRNP40-205ENST00000486941 BAGE3Q86Y29 109 aa2.15□□□□□ -2.07
SNRNP40-205ENST00000486941 BOD1L2Q8IYS8 172 aa2.15□□□□□ -2.07
SNRNP40-205ENST00000486941 LOC107984156A0A0G2JMH3 177 aa2.14□□□□□ -2.07
SNRNP40-205ENST00000486941 TRBV10-3A0A0K0K1G6 114 aa2.14□□□□□ -2.07
SNRNP40-205ENST00000486941 TMEM223A0PJW6 202 aa2.14□□□□□ -2.07
SNRNP40-205ENST00000486941 SMIM13P0DJ93 91 aa2.14□□□□□ -2.07
SNRNP40-205ENST00000486941 SEC61GP60059 68 aa2.14□□□□□ -2.07
SNRNP40-205ENST00000486941 HERV-K104P63124 156 aa2.14□□□□□ -2.07
SNRNP40-205ENST00000486941 MOBPQ13875 183 aa2.14□□□□□ -2.07
SNRNP40-205ENST00000486941 KRTAP19-2Q3LHN2 52 aa2.14□□□□□ -2.07
SNRNP40-205ENST00000486941 ARL17AQ8IVW1 177 aa2.14□□□□□ -2.07
SNRNP40-205ENST00000486941 C18orf32Q8TCD1 76 aa2.14□□□□□ -2.07
SNRNP40-205ENST00000486941 TRAV12-1A0A0B4J245 112 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 TRBV10-2A0A0K0K1G8 114 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 C20orf202A1L168 122 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 NCR3O14931 201 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 ERC2-IT1O76042 136 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 MT1HP80294 61 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 MEIG1Q5JSS6 88 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 Q6ZRX8 168 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 MIR7-3HGQ8N6C7 128 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 Q9BRP9 147 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 MAP1LC3CQ9BXW4 147 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 TRAPPC1Q9Y5R8 145 aa2.13□□□□□ -2.07
SNRNP40-205ENST00000486941 IGLV8-61A0A075B6I0 122 aa2.12□□□□□ -2.07
SNRNP40-205ENST00000486941 MYMXA0A1B0GTQ4 84 aa2.12□□□□□ -2.07
SNRNP40-205ENST00000486941 TAX1BP3O14907 124 aa2.12□□□□□ -2.07
SNRNP40-205ENST00000486941 PMCHL1Q16048 86 aa2.12□□□□□ -2.07
SNRNP40-205ENST00000486941 PCOTHQ58A44 107 aa2.12□□□□□ -2.07
SNRNP40-205ENST00000486941 Q6ZVQ6 151 aa2.12□□□□□ -2.07
SNRNP40-205ENST00000486941 IFI27L1Q96BM0 104 aa2.12□□□□□ -2.07
SNRNP40-205ENST00000486941 NDUFC2O95298 119 aa2.11□□□□□ -2.07
SNRNP40-205ENST00000486941 IGLV6-57P01721 117 aa2.11□□□□□ -2.07
SNRNP40-205ENST00000486941 C9orf153Q5TBE3 101 aa2.11□□□□□ -2.07
SNRNP40-205ENST00000486941 K7ERU9 68 aa2.1□□□□□ -2.07
SNRNP40-205ENST00000486941 LEPROTO15243 131 aa2.1□□□□□ -2.07
SNRNP40-205ENST00000486941 SPRR1BP22528 89 aa2.1□□□□□ -2.07
SNRNP40-205ENST00000486941 S100A7L2Q5SY68 101 aa2.1□□□□□ -2.07
SNRNP40-205ENST00000486941 SLC25A34Q6PIV7 304 aa2.1□□□□□ -2.07
SNRNP40-205ENST00000486941 CHCHD1Q96BP2 118 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-205ENST00000486941 LIMD2Q9BT23 127 aa2.1□□□□□ -2.07
SNRNP40-205ENST00000486941 SPANXB1Q9NS25 103 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-205ENST00000486941 TRAV23DV6A0A075B6W5 121 aa2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 C9orf92A6NGG3 77 aa2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 J3QQQ9 107 aa2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 M0R2T5 61 aa2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 ZNF73O43830 326 aaPredicted RBP2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 NMUP48645 174 aa2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 HINT1P49773 126 aaPredicted RBP2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 TSPEAR-AS2P59090 65 aa2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 CD164Q04900 197 aa2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 ST20-AS1Q8NBB2 130 aa2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 UQCR10Q9UDW1 63 aa2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 LAMTOR3Q9UHA4 124 aa2.09□□□□□ -2.07
SNRNP40-205ENST00000486941 HSBP1O75506 76 aa2.08□□□□□ -2.08
SNRNP40-205ENST00000486941 PLNP26678 52 aa2.08□□□□□ -2.08
SNRNP40-205ENST00000486941 BVES-AS1Q5T3Y7 98 aa2.08□□□□□ -2.08
SNRNP40-205ENST00000486941 Q5XG85 94 aa2.08□□□□□ -2.08
SNRNP40-205ENST00000486941 HRCT1Q6UXD1 115 aa2.08□□□□□ -2.08
SNRNP40-205ENST00000486941 SIGMAR1Q99720 223 aa2.08□□□□□ -2.08
SNRNP40-205ENST00000486941 VPS25Q9BRG1 176 aa2.08□□□□□ -2.08
SNRNP40-205ENST00000486941 A0A1B0GV72 72 aa2.07□□□□□ -2.08
SNRNP40-205ENST00000486941 LEPROTL1O95214 131 aa2.07□□□□□ -2.08
SNRNP40-205ENST00000486941 LGALS3P17931 250 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-205ENST00000486941 HERVK_113P61574 105 aa2.07□□□□□ -2.08
SNRNP40-205ENST00000486941 RPL37P61927 97 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-205ENST00000486941 C1orf195Q5TG92 126 aa2.07□□□□□ -2.08
SNRNP40-205ENST00000486941 SOSTDC1Q6X4U4 206 aa2.07□□□□□ -2.08
SNRNP40-205ENST00000486941 COX6B2Q6YFQ2 88 aa2.07□□□□□ -2.08
SNRNP40-205ENST00000486941 FLGP20930 4061 aaPredicted RBP2.06□□□□□ -2.08
SNRNP40-205ENST00000486941 A0A0J9YXY3 114 aa2.06□□□□□ -2.08
SNRNP40-205ENST00000486941 TEX49A0A1B0GTD5 131 aa2.06□□□□□ -2.08
SNRNP40-205ENST00000486941 H7C2G1 150 aa2.06□□□□□ -2.08
SNRNP40-205ENST00000486941 DPM2O94777 84 aa2.06□□□□□ -2.08
SNRNP40-205ENST00000486941 IGKCP01834 107 aa2.06□□□□□ -2.08
SNRNP40-205ENST00000486941 TAL2Q16559 108 aa2.06□□□□□ -2.08
SNRNP40-205ENST00000486941 VAMP8Q9BV40 100 aa2.06□□□□□ -2.08
SNRNP40-205ENST00000486941 SPANXCQ9NY87 97 aa2.06□□□□□ -2.08
SNRNP40-205ENST00000486941 E9PLD3 99 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 K7EP34 96 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 TIMM17BO60830 172 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 SERF1AO75920 110 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 C3orf79P0CE67 100 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 COX7BP24311 80 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 ELOF1P60002 83 aaKnown RBP2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 NPC2P61916 151 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 HSD52Q0P140 79 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 SPATA45Q537H7 98 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 C2orf91Q6ZV80 131 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 MTURNQ8N3F0 131 aa2.05□□□□□ -2.08
SNRNP40-205ENST00000486941 OR13C6PQ8NH95 151 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms