RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 V9GYY9 64 aa4.31□□□□□ -1.72
UBR4-214ENST00000486515 TRIAP1O43715 76 aa4.3□□□□□ -1.72
UBR4-214ENST00000486515 ZNF861PO60384 105 aa4.3□□□□□ -1.72
UBR4-214ENST00000486515 SPRR1AP35321 89 aa4.3□□□□□ -1.72
UBR4-214ENST00000486515 PRLHP81277 87 aa4.3□□□□□ -1.72
UBR4-214ENST00000486515 TRBV20-1A0A075B6N2 111 aa4.29□□□□□ -1.72
UBR4-214ENST00000486515 A0A1W2PPM0 123 aa4.29□□□□□ -1.72
UBR4-214ENST00000486515 H3BQ85 93 aa4.29□□□□□ -1.72
UBR4-214ENST00000486515 ATXN8Q156A1 80 aa4.29□□□□□ -1.72
UBR4-214ENST00000486515 KRTAP29-1A8MX34 341 aaPredicted RBP4.28□□□□□ -1.72
UBR4-214ENST00000486515 LORP23490 312 aaPredicted RBP4.28□□□□□ -1.72
UBR4-214ENST00000486515 NDUFV3P56181 108 aaKnown RBP4.28□□□□□ -1.72
UBR4-214ENST00000486515 SPINK6Q6UWN8 80 aa4.28□□□□□ -1.72
UBR4-214ENST00000486515 LINC00575Q6W349 94 aa4.28□□□□□ -1.72
UBR4-214ENST00000486515 SMCR5Q8TEV8 140 aa4.28□□□□□ -1.72
UBR4-214ENST00000486515 NAA38Q9BRA0 125 aaKnown RBP4.28□□□□□ -1.72
UBR4-214ENST00000486515 VPS13BQ7Z7G8 4022 aa4.28□□□□□ -1.72
UBR4-214ENST00000486515 C9JAW5 83 aa4.27□□□□□ -1.73
UBR4-214ENST00000486515 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.27□□□□□ -1.73
UBR4-214ENST00000486515 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
UBR4-214ENST00000486515 CDIP1Q9H305 208 aa4.27□□□□□ -1.73
UBR4-214ENST00000486515 SPCS1Q9Y6A9 102 aa4.27□□□□□ -1.73
UBR4-214ENST00000486515 F8WEM9 126 aa4.26□□□□□ -1.73
UBR4-214ENST00000486515 KRTAP4-16G5E9R7 235 aaPredicted RBP4.26□□□□□ -1.73
UBR4-214ENST00000486515 DEFB105AQ8NG35 78 aa4.26□□□□□ -1.73
UBR4-214ENST00000486515 CLEC2BQ92478 149 aa4.26□□□□□ -1.73
UBR4-214ENST00000486515 ORMDL1Q9P0S3 153 aa4.26□□□□□ -1.73
UBR4-214ENST00000486515 H3BMG7 143 aa4.25□□□□□ -1.73
UBR4-214ENST00000486515 TRACP01848 142 aa4.25□□□□□ -1.73
UBR4-214ENST00000486515 GAGE2AQ6NT46 116 aa4.25□□□□□ -1.73
UBR4-214ENST00000486515 Q6ZQY7 126 aa4.25□□□□□ -1.73
UBR4-214ENST00000486515 LAMTOR3Q9UHA4 124 aa4.25□□□□□ -1.73
UBR4-214ENST00000486515 TEX49A0A1B0GTD5 131 aa4.24□□□□□ -1.73
UBR4-214ENST00000486515 TMEM256-PLSCR3K7ERE1 68 aa4.24□□□□□ -1.73
UBR4-214ENST00000486515 LST1O00453 97 aa4.24□□□□□ -1.73
UBR4-214ENST00000486515 PPDPFLQ8WWR9 84 aa4.24□□□□□ -1.73
UBR4-214ENST00000486515 Q9BRP9 147 aa4.24□□□□□ -1.73
UBR4-214ENST00000486515 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
UBR4-214ENST00000486515 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
UBR4-214ENST00000486515 CCDC179H3BU77 68 aa4.23□□□□□ -1.73
UBR4-214ENST00000486515 TCL1BO95988 128 aa4.23□□□□□ -1.73
UBR4-214ENST00000486515 MT-ATP8P03928 68 aa4.22□□□□□ -1.73
UBR4-214ENST00000486515 CRYGAP11844 174 aa4.22□□□□□ -1.73
UBR4-214ENST00000486515 KRTAP13-1Q8IUC0 172 aa4.22□□□□□ -1.73
UBR4-214ENST00000486515 FAM218AQ96MZ4 157 aa4.22□□□□□ -1.73
UBR4-214ENST00000486515 SPRR4Q96PI1 79 aa4.22□□□□□ -1.73
UBR4-214ENST00000486515 ERC2-IT1O76042 136 aa4.21□□□□□ -1.74
UBR4-214ENST00000486515 BAALC-AS2P0C853 105 aa4.21□□□□□ -1.74
UBR4-214ENST00000486515 C9orf153Q5TBE3 101 aa4.21□□□□□ -1.74
UBR4-214ENST00000486515 ST20-AS1Q8NBB2 130 aa4.21□□□□□ -1.74
UBR4-214ENST00000486515 IMUPQ9GZP8 106 aa4.21□□□□□ -1.74
UBR4-214ENST00000486515 IGLV9-49A0A0B4J1Y8 123 aa4.2□□□□□ -1.74
UBR4-214ENST00000486515 PRO0461Q9UI25 63 aa4.2□□□□□ -1.74
UBR4-214ENST00000486515 IGLV5-48A0A075B6I7 105 aa4.19□□□□□ -1.74
UBR4-214ENST00000486515 JMJD7-PLA2G4BH0Y9G9 81 aa4.19□□□□□ -1.74
UBR4-214ENST00000486515 H3BT86 120 aa4.19□□□□□ -1.74
UBR4-214ENST00000486515 UQCRQO14949 82 aa4.19□□□□□ -1.74
UBR4-214ENST00000486515 FAM229BQ4G0N7 80 aa4.19□□□□□ -1.74
UBR4-214ENST00000486515 ANKRD29Q8N6D5 301 aa4.19□□□□□ -1.74
UBR4-214ENST00000486515 LINC01600Q96MT4 127 aa4.19□□□□□ -1.74
UBR4-214ENST00000486515 DNAH8Q96JB1 4490 aa4.19□□□□□ -1.74
UBR4-214ENST00000486515 ETDBQ3ZM63 59 aa4.18□□□□□ -1.74
UBR4-214ENST00000486515 Q8N377 158 aa4.18□□□□□ -1.74
UBR4-214ENST00000486515 TYMSOSQ8TAI1 123 aa4.18□□□□□ -1.74
UBR4-214ENST00000486515 DSCR8Q96T75 97 aa4.18□□□□□ -1.74
UBR4-214ENST00000486515 LRP1Q07954 4544 aaKnown RBP4.17□□□□□ -1.74
UBR4-214ENST00000486515 SPRR1BP22528 89 aa4.17□□□□□ -1.74
UBR4-214ENST00000486515 C4orf26Q17RF5 130 aa4.17□□□□□ -1.74
UBR4-214ENST00000486515 LINC00483Q53H64 154 aa4.17□□□□□ -1.74
UBR4-214ENST00000486515 Q6JHZ5 121 aa4.17□□□□□ -1.74
UBR4-214ENST00000486515 C3orf22Q8N5N4 141 aa4.17□□□□□ -1.74
UBR4-214ENST00000486515 Q8NBF4 154 aa4.17□□□□□ -1.74
UBR4-214ENST00000486515 ANAPC11Q9NYG5 84 aa4.17□□□□□ -1.74
UBR4-214ENST00000486515 KRTAP10-4P60372 401 aaPredicted RBP4.16□□□□□ -1.74
UBR4-214ENST00000486515 TMEM258P61165 79 aa4.16□□□□□ -1.74
UBR4-214ENST00000486515 RBM3P98179 157 aaKnown RBP4.16□□□□□ -1.74
UBR4-214ENST00000486515 MOBPQ13875 183 aa4.16□□□□□ -1.74
UBR4-214ENST00000486515 C1orf195Q5TG92 126 aa4.16□□□□□ -1.74
UBR4-214ENST00000486515 SSBP3-AS1Q7Z2R9 100 aa4.16□□□□□ -1.74
UBR4-214ENST00000486515 TEN1Q86WV5 123 aa4.16□□□□□ -1.74
UBR4-214ENST00000486515 TRBV7-7A0A0K0K1E9 115 aa4.15□□□□□ -1.75
UBR4-214ENST00000486515 OXTP01178 125 aa4.15□□□□□ -1.75
UBR4-214ENST00000486515 PDE6GP18545 87 aa4.15□□□□□ -1.75
UBR4-214ENST00000486515 CD164Q04900 197 aa4.15□□□□□ -1.75
UBR4-214ENST00000486515 Q5XG85 94 aa4.15□□□□□ -1.75
UBR4-214ENST00000486515 LINC01547P58512 204 aaPredicted RBP4.14□□□□□ -1.75
UBR4-214ENST00000486515 SPAG11AQ6PDA7 123 aa4.14□□□□□ -1.75
UBR4-214ENST00000486515 PRR26Q8N8Z3 221 aa4.14□□□□□ -1.75
UBR4-214ENST00000486515 A0A087X002 238 aa4.12□□□□□ -1.75
UBR4-214ENST00000486515 FAM240AA0A1B0GVK7 77 aa4.12□□□□□ -1.75
UBR4-214ENST00000486515 KRTAP1-4P0C5Y4 121 aa4.12□□□□□ -1.75
UBR4-214ENST00000486515 LIMD2Q9BT23 127 aa4.12□□□□□ -1.75
UBR4-214ENST00000486515 FAT3Q8TDW7 4589 aa4.12□□□□□ -1.75
UBR4-214ENST00000486515 A0A0U1RQV1 116 aa4.11□□□□□ -1.75
UBR4-214ENST00000486515 CCKP06307 115 aa4.11□□□□□ -1.75
UBR4-214ENST00000486515 HRCT1Q6UXD1 115 aa4.11□□□□□ -1.75
UBR4-214ENST00000486515 SMIM29Q86T20 159 aa4.11□□□□□ -1.75
UBR4-214ENST00000486515 LINC00304Q8N9R0 145 aa4.11□□□□□ -1.75
UBR4-214ENST00000486515 C14orf132Q9NPU4 83 aa4.11□□□□□ -1.75
UBR4-214ENST00000486515 IGLV8-61A0A075B6I0 122 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms