RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 LCE2AQ5TA79 106 aaPredicted RBP10.19□□□□□ -0.78
PRPF40A-209ENST00000486100 NHP2Q9NX24 153 aaKnown RBP10.19□□□□□ -0.78
PRPF40A-209ENST00000486100 VAMP3Q15836 100 aa10.17□□□□□ -0.78
PRPF40A-209ENST00000486100 XP32Q5T750 250 aa10.17□□□□□ -0.78
PRPF40A-209ENST00000486100 CEND1Q8N111 149 aa10.17□□□□□ -0.78
PRPF40A-209ENST00000486100 M0R143 59 aa10.16□□□□□ -0.78
PRPF40A-209ENST00000486100 H7C2G1 150 aa10.15□□□□□ -0.78
PRPF40A-209ENST00000486100 Q5XG85 94 aa10.13□□□□□ -0.79
PRPF40A-209ENST00000486100 LINC00575Q6W349 94 aa10.12□□□□□ -0.79
PRPF40A-209ENST00000486100 KRTAP4-1Q9BYQ7 146 aa10.11□□□□□ -0.79
PRPF40A-209ENST00000486100 A0A0G2JQZ4 141 aa10.1□□□□□ -0.79
PRPF40A-209ENST00000486100 A0A0B4J2C4 111 aa10.09□□□□□ -0.79
PRPF40A-209ENST00000486100 hADV29S1A0JD25 119 aa10.08□□□□□ -0.8
PRPF40A-209ENST00000486100 FXYD2P54710 66 aa10.08□□□□□ -0.8
PRPF40A-209ENST00000486100 BVES-AS1Q5T3Y7 98 aa10.08□□□□□ -0.8
PRPF40A-209ENST00000486100 Q6ZQY7 126 aa10.06□□□□□ -0.8
PRPF40A-209ENST00000486100 C9orf92A6NGG3 77 aa10.05□□□□□ -0.8
PRPF40A-209ENST00000486100 F8WEM9 126 aa10.05□□□□□ -0.8
PRPF40A-209ENST00000486100 C1orf195Q5TG92 126 aa10.05□□□□□ -0.8
PRPF40A-209ENST00000486100 RAB37Q96AX2 223 aa10.05□□□□□ -0.8
PRPF40A-209ENST00000486100 CFC1BP0CG36 223 aa10.04□□□□□ -0.8
PRPF40A-209ENST00000486100 CFC1P0CG37 223 aa10.04□□□□□ -0.8
PRPF40A-209ENST00000486100 PRO1854Q9UHT4 67 aa10.03□□□□□ -0.8
PRPF40A-209ENST00000486100 TCL1BO95988 128 aa10.01□□□□□ -0.81
PRPF40A-209ENST00000486100 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.01□□□□□ -0.81
PRPF40A-209ENST00000486100 IGLV8-61A0A075B6I0 122 aa10□□□□□ -0.81
PRPF40A-209ENST00000486100 PCP4L1A6NKN8 68 aa10□□□□□ -0.81
PRPF40A-209ENST00000486100 Q6JHZ5 121 aa10□□□□□ -0.81
PRPF40A-209ENST00000486100 OCIAD2Q56VL3 154 aa9.98□□□□□ -0.81
PRPF40A-209ENST00000486100 PCOTHQ58A44 107 aa9.98□□□□□ -0.81
PRPF40A-209ENST00000486100 PPDPFLQ8WWR9 84 aa9.97□□□□□ -0.81
PRPF40A-209ENST00000486100 IGFL1Q6UW32 110 aa9.96□□□□□ -0.82
PRPF40A-209ENST00000486100 KRTAP9-2Q9BYQ4 174 aa9.96□□□□□ -0.82
PRPF40A-209ENST00000486100 BATFQ16520 125 aa9.95□□□□□ -0.82
PRPF40A-209ENST00000486100 CLEC2BQ92478 149 aa9.95□□□□□ -0.82
PRPF40A-209ENST00000486100 SNHG12Q9BXW3 62 aa9.95□□□□□ -0.82
PRPF40A-209ENST00000486100 TRBV7-7A0A0K0K1E9 115 aa9.93□□□□□ -0.82
PRPF40A-209ENST00000486100 H0YGX0 51 aa9.92□□□□□ -0.82
PRPF40A-209ENST00000486100 K7ERJ3 54 aa9.92□□□□□ -0.82
PRPF40A-209ENST00000486100 COL5A1-AS1Q5SY13 56 aa9.92□□□□□ -0.82
PRPF40A-209ENST00000486100 SNCGO76070 127 aa9.91□□□□□ -0.82
PRPF40A-209ENST00000486100 COX6CP09669 75 aa9.9□□□□□ -0.82
PRPF40A-209ENST00000486100 LYRM7Q5U5X0 104 aa9.88□□□□□ -0.83
PRPF40A-209ENST00000486100 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
PRPF40A-209ENST00000486100 H3BUT2 72 aa9.86□□□□□ -0.83
PRPF40A-209ENST00000486100 PSMB2P49721 201 aa9.86□□□□□ -0.83
PRPF40A-209ENST00000486100 LCE2CQ5TA81 110 aa9.86□□□□□ -0.83
PRPF40A-209ENST00000486100 FAM218AQ96MZ4 157 aa9.86□□□□□ -0.83
PRPF40A-209ENST00000486100 KRTAP19-2Q3LHN2 52 aa9.85□□□□□ -0.83
PRPF40A-209ENST00000486100 A0A1B0GX51 115 aa9.84□□□□□ -0.83
PRPF40A-209ENST00000486100 C9orf118A6NHY6 69 aa9.84□□□□□ -0.83
PRPF40A-209ENST00000486100 TAX1BP3O14907 124 aa9.84□□□□□ -0.83
PRPF40A-209ENST00000486100 TRIAP1O43715 76 aa9.84□□□□□ -0.83
PRPF40A-209ENST00000486100 NDUFV3P56181 108 aaKnown RBP9.82□□□□□ -0.84
PRPF40A-209ENST00000486100 LST1O00453 97 aa9.81□□□□□ -0.84
PRPF40A-209ENST00000486100 Q6Q795 121 aa9.81□□□□□ -0.84
PRPF40A-209ENST00000486100 GHRHP01286 108 aa9.8□□□□□ -0.84
PRPF40A-209ENST00000486100 SCGB1C2P0DMR2 95 aa9.8□□□□□ -0.84
PRPF40A-209ENST00000486100 TRBV20-1A0A075B6N2 111 aa9.78□□□□□ -0.84
PRPF40A-209ENST00000486100 TEN1Q86WV5 123 aa9.78□□□□□ -0.84
PRPF40A-209ENST00000486100 FABP2P12104 132 aa9.77□□□□□ -0.85
PRPF40A-209ENST00000486100 SS18L2Q9UHA2 77 aa9.77□□□□□ -0.85
PRPF40A-209ENST00000486100 A0A1W2PPM0 123 aa9.76□□□□□ -0.85
PRPF40A-209ENST00000486100 H3BMG7 143 aa9.76□□□□□ -0.85
PRPF40A-209ENST00000486100 OBSCN-AS1Q96MR7 158 aa9.75□□□□□ -0.85
PRPF40A-209ENST00000486100 TRACP01848 142 aa9.74□□□□□ -0.85
PRPF40A-209ENST00000486100 MT1HP80294 61 aa9.74□□□□□ -0.85
PRPF40A-209ENST00000486100 H3BQ85 93 aa9.73□□□□□ -0.85
PRPF40A-209ENST00000486100 ATXN8Q156A1 80 aa9.73□□□□□ -0.85
PRPF40A-209ENST00000486100 DNAL4O96015 105 aa9.72□□□□□ -0.85
PRPF40A-209ENST00000486100 NAA38Q9BRA0 125 aaKnown RBP9.72□□□□□ -0.85
PRPF40A-209ENST00000486100 A0A087WSZ3 146 aa9.71□□□□□ -0.86
PRPF40A-209ENST00000486100 Q75L30 129 aa9.71□□□□□ -0.86
PRPF40A-209ENST00000486100 ATP11AUNQ6ZP68 121 aa9.69□□□□□ -0.86
PRPF40A-209ENST00000486100 LCE2DQ5TA82 110 aaPredicted RBP9.68□□□□□ -0.86
PRPF40A-209ENST00000486100 A0A1W2PNM2 257 aa9.67□□□□□ -0.86
PRPF40A-209ENST00000486100 Q96NJ1 140 aa9.67□□□□□ -0.86
PRPF40A-209ENST00000486100 ORMDL1Q9P0S3 153 aa9.67□□□□□ -0.86
PRPF40A-209ENST00000486100 SPCS1Q9Y6A9 102 aa9.67□□□□□ -0.86
PRPF40A-209ENST00000486100 GTF2H5Q6ZYL4 71 aa9.66□□□□□ -0.86
PRPF40A-209ENST00000486100 ANKRD29Q8N6D5 301 aa9.64□□□□□ -0.87
PRPF40A-209ENST00000486100 KRTAP9-6A0A140TA67 174 aa9.63□□□□□ -0.87
PRPF40A-209ENST00000486100 K7EP34 96 aa9.63□□□□□ -0.87
PRPF40A-209ENST00000486100 TMEM256-PLSCR3K7ERE1 68 aa9.63□□□□□ -0.87
PRPF40A-209ENST00000486100 COX6B2Q6YFQ2 88 aa9.63□□□□□ -0.87
PRPF40A-209ENST00000486100 TRBV7-4A0A0J9YYF1 115 aa9.61□□□□□ -0.87
PRPF40A-209ENST00000486100 C20orf166-AS1Q96NR2 134 aa9.61□□□□□ -0.87
PRPF40A-209ENST00000486100 A8MUU9 505 aa9.59□□□□□ -0.87
PRPF40A-209ENST00000486100 A0A1B0GV72 72 aa9.58□□□□□ -0.88
PRPF40A-209ENST00000486100 H3BT86 120 aa9.58□□□□□ -0.88
PRPF40A-209ENST00000486100 C9JAW5 83 aa9.57□□□□□ -0.88
PRPF40A-209ENST00000486100 UBE2V1Q13404 147 aa9.57□□□□□ -0.88
PRPF40A-209ENST00000486100 M0R2T5 61 aa9.56□□□□□ -0.88
PRPF40A-209ENST00000486100 BAALC-AS2P0C853 105 aa9.56□□□□□ -0.88
PRPF40A-209ENST00000486100 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
PRPF40A-209ENST00000486100 KRTAP10-6P60371 365 aaPredicted RBP9.56□□□□□ -0.88
PRPF40A-209ENST00000486100 DSCR10P59022 87 aa9.55□□□□□ -0.88
PRPF40A-209ENST00000486100 SIGMAR1Q99720 223 aa9.55□□□□□ -0.88
PRPF40A-209ENST00000486100 CCKP06307 115 aa9.54□□□□□ -0.88
PRPF40A-209ENST00000486100 IGKV4-1P06312 121 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms