RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 AKR1D1P51857 326 aa7.27□□□□□ -1.25
UBA3-210ENST00000485424 Q6ZVH6 145 aa7.25□□□□□ -1.25
UBA3-210ENST00000485424 NHP2Q9NX24 153 aaKnown RBP7.25□□□□□ -1.25
UBA3-210ENST00000485424 IGLV8-61A0A075B6I0 122 aa7.24□□□□□ -1.25
UBA3-210ENST00000485424 A4D1N5 150 aa7.24□□□□□ -1.25
UBA3-210ENST00000485424 PCOTHQ58A44 107 aa7.24□□□□□ -1.25
UBA3-210ENST00000485424 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
UBA3-210ENST00000485424 TRAV13-2A0A0B4J235 113 aa7.23□□□□□ -1.25
UBA3-210ENST00000485424 KRTAP19-2Q3LHN2 52 aa7.23□□□□□ -1.25
UBA3-210ENST00000485424 MUSTN1Q8IVN3 82 aa7.23□□□□□ -1.25
UBA3-210ENST00000485424 ATOH7Q8N100 152 aa7.23□□□□□ -1.25
UBA3-210ENST00000485424 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
UBA3-210ENST00000485424 F8WEM9 126 aa7.21□□□□□ -1.26
UBA3-210ENST00000485424 IGLV5-48A0A075B6I7 105 aa7.2□□□□□ -1.26
UBA3-210ENST00000485424 VAMP3Q15836 100 aa7.2□□□□□ -1.26
UBA3-210ENST00000485424 COA6Q5JTJ3 125 aaKnown RBP7.2□□□□□ -1.26
UBA3-210ENST00000485424 TCL1BO95988 128 aa7.19□□□□□ -1.26
UBA3-210ENST00000485424 MT1HP80294 61 aa7.19□□□□□ -1.26
UBA3-210ENST00000485424 SMIM29Q86T20 159 aa7.19□□□□□ -1.26
UBA3-210ENST00000485424 PCP2Q8IVA1 136 aa7.19□□□□□ -1.26
UBA3-210ENST00000485424 SNRPEP62304 92 aaKnown RBP7.18□□□□□ -1.26
UBA3-210ENST00000485424 Q5XG85 94 aa7.18□□□□□ -1.26
UBA3-210ENST00000485424 SMIM11BQ8TCY0 68 aa7.18□□□□□ -1.26
UBA3-210ENST00000485424 C1orf195Q5TG92 126 aa7.17□□□□□ -1.26
UBA3-210ENST00000485424 A0A0G2JQZ4 141 aa7.16□□□□□ -1.26
UBA3-210ENST00000485424 HSBP1L1C9JCN9 74 aa7.16□□□□□ -1.26
UBA3-210ENST00000485424 S100A2P29034 98 aa7.14□□□□□ -1.27
UBA3-210ENST00000485424 CFC1BP0CG36 223 aa7.13□□□□□ -1.27
UBA3-210ENST00000485424 hADV29S1A0JD25 119 aa7.12□□□□□ -1.27
UBA3-210ENST00000485424 RPL37P61927 97 aaKnown RBP7.12□□□□□ -1.27
UBA3-210ENST00000485424 FLGP20930 4061 aaPredicted RBP7.11□□□□□ -1.27
UBA3-210ENST00000485424 COX6B2Q6YFQ2 88 aa7.11□□□□□ -1.27
UBA3-210ENST00000485424 Q6ZQY7 126 aa7.11□□□□□ -1.27
UBA3-210ENST00000485424 Q6JHZ5 121 aa7.1□□□□□ -1.27
UBA3-210ENST00000485424 LINC00575Q6W349 94 aa7.1□□□□□ -1.27
UBA3-210ENST00000485424 M0R2T5 61 aa7.09□□□□□ -1.27
UBA3-210ENST00000485424 KRTAP10-6P60371 365 aaPredicted RBP7.09□□□□□ -1.27
UBA3-210ENST00000485424 CLEC2BQ92478 149 aa7.08□□□□□ -1.28
UBA3-210ENST00000485424 BVES-AS1Q5T3Y7 98 aa7.07□□□□□ -1.28
UBA3-210ENST00000485424 TRBV7-7A0A0K0K1E9 115 aa7.06□□□□□ -1.28
UBA3-210ENST00000485424 S100A6P06703 90 aa7.06□□□□□ -1.28
UBA3-210ENST00000485424 SNHG12Q9BXW3 62 aa7.06□□□□□ -1.28
UBA3-210ENST00000485424 IGFL1Q6UW32 110 aa7.05□□□□□ -1.28
UBA3-210ENST00000485424 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.05□□□□□ -1.28
UBA3-210ENST00000485424 HIST3H2BBQ8N257 126 aa7.05□□□□□ -1.28
UBA3-210ENST00000485424 HIST1H4GQ99525 98 aa7.05□□□□□ -1.28
UBA3-210ENST00000485424 C12orf57Q99622 126 aa7.05□□□□□ -1.28
UBA3-210ENST00000485424 SNCGO76070 127 aa7.04□□□□□ -1.28
UBA3-210ENST00000485424 OCIAD2Q56VL3 154 aa7.04□□□□□ -1.28
UBA3-210ENST00000485424 PPDPFLQ8WWR9 84 aa7.04□□□□□ -1.28
UBA3-210ENST00000485424 HIST1H2BLQ99880 126 aa7.04□□□□□ -1.28
UBA3-210ENST00000485424 SCGB1D1O95968 90 aa7.03□□□□□ -1.28
UBA3-210ENST00000485424 ATP11AUNQ6ZP68 121 aa7.03□□□□□ -1.28
UBA3-210ENST00000485424 LST1O00453 97 aa7.01□□□□□ -1.29
UBA3-210ENST00000485424 OBSCN-AS1Q96MR7 158 aa7□□□□□ -1.29
UBA3-210ENST00000485424 Q6Q795 121 aa6.99□□□□□ -1.29
UBA3-210ENST00000485424 RAB37Q96AX2 223 aa6.99□□□□□ -1.29
UBA3-210ENST00000485424 SS18L2Q9UHA2 77 aa6.99□□□□□ -1.29
UBA3-210ENST00000485424 H3BUT2 72 aa6.98□□□□□ -1.29
UBA3-210ENST00000485424 COX8AP10176 69 aa6.97□□□□□ -1.29
UBA3-210ENST00000485424 Q75L30 129 aa6.97□□□□□ -1.29
UBA3-210ENST00000485424 Q96NJ1 140 aa6.96□□□□□ -1.3
UBA3-210ENST00000485424 H0YGX0 51 aa6.94□□□□□ -1.3
UBA3-210ENST00000485424 S100A1P23297 94 aa6.93□□□□□ -1.3
UBA3-210ENST00000485424 TEN1Q86WV5 123 aa6.93□□□□□ -1.3
UBA3-210ENST00000485424 DLEU1O43261 78 aa6.92□□□□□ -1.3
UBA3-210ENST00000485424 CFC1P0CG37 223 aa6.92□□□□□ -1.3
UBA3-210ENST00000485424 NDUFV3P56181 108 aaKnown RBP6.92□□□□□ -1.3
UBA3-210ENST00000485424 C14orf144Q96I85 54 aa6.91□□□□□ -1.3
UBA3-210ENST00000485424 A0A0B4J2C4 111 aa6.9□□□□□ -1.3
UBA3-210ENST00000485424 TMEM238LA0A1B0GVL6 79 aa6.9□□□□□ -1.3
UBA3-210ENST00000485424 TRBV20-1A0A075B6N2 111 aa6.89□□□□□ -1.31
UBA3-210ENST00000485424 A0A087WSZ3 146 aa6.89□□□□□ -1.31
UBA3-210ENST00000485424 FABP2P12104 132 aa6.89□□□□□ -1.31
UBA3-210ENST00000485424 SPATA45Q537H7 98 aa6.89□□□□□ -1.31
UBA3-210ENST00000485424 PAM16Q9Y3D7 125 aa6.89□□□□□ -1.31
UBA3-210ENST00000485424 H3BMG7 143 aa6.88□□□□□ -1.31
UBA3-210ENST00000485424 H3BS24 57 aa6.88□□□□□ -1.31
UBA3-210ENST00000485424 HIGD1BQ9P298 99 aa6.88□□□□□ -1.31
UBA3-210ENST00000485424 A0A1B0GX51 115 aa6.87□□□□□ -1.31
UBA3-210ENST00000485424 VAMP8Q9BV40 100 aa6.87□□□□□ -1.31
UBA3-210ENST00000485424 FAM218AQ96MZ4 157 aa6.86□□□□□ -1.31
UBA3-210ENST00000485424 SIGMAR1Q99720 223 aa6.86□□□□□ -1.31
UBA3-210ENST00000485424 DNAL4O96015 105 aa6.85□□□□□ -1.31
UBA3-210ENST00000485424 CEND1Q8N111 149 aa6.85□□□□□ -1.31
UBA3-210ENST00000485424 C20orf166-AS1Q96NR2 134 aa6.85□□□□□ -1.31
UBA3-210ENST00000485424 PRO1854Q9UHT4 67 aa6.85□□□□□ -1.31
UBA3-210ENST00000485424 SSPOA2VEC9 5147 aa6.83□□□□□ -1.32
UBA3-210ENST00000485424 A8MUU9 505 aa6.83□□□□□ -1.32
UBA3-210ENST00000485424 DSCR10P59022 87 aa6.83□□□□□ -1.32
UBA3-210ENST00000485424 C2orf91Q6ZV80 131 aa6.81□□□□□ -1.32
UBA3-210ENST00000485424 ANKRD29Q8N6D5 301 aa6.81□□□□□ -1.32
UBA3-210ENST00000485424 USH2AO75445 5202 aa6.81□□□□□ -1.32
UBA3-210ENST00000485424 H3BQ85 93 aa6.8□□□□□ -1.32
UBA3-210ENST00000485424 IGKV4-1P06312 121 aa6.8□□□□□ -1.32
UBA3-210ENST00000485424 PSMB2P49721 201 aa6.8□□□□□ -1.32
UBA3-210ENST00000485424 LINC00313P59037 77 aa6.8□□□□□ -1.32
UBA3-210ENST00000485424 ORMDL1Q9P0S3 153 aa6.8□□□□□ -1.32
UBA3-210ENST00000485424 FAM236DA0A1B0GTK5 79 aa6.79□□□□□ -1.32
UBA3-210ENST00000485424 A0A1B0GV72 72 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms