RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 HIST1H4GQ99525 98 aa8.58□□□□□ -1.04
SIK3-211ENST00000485363 Q6JHZ5 121 aa8.57□□□□□ -1.04
SIK3-211ENST00000485363 BVES-AS1Q5T3Y7 98 aa8.56□□□□□ -1.04
SIK3-211ENST00000485363 C12orf57Q99622 126 aa8.56□□□□□ -1.04
SIK3-211ENST00000485363 COX8AP10176 69 aa8.55□□□□□ -1.04
SIK3-211ENST00000485363 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.55□□□□□ -1.04
SIK3-211ENST00000485363 CLEC2BQ92478 149 aa8.55□□□□□ -1.04
SIK3-211ENST00000485363 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
SIK3-211ENST00000485363 OCIAD2Q56VL3 154 aa8.53□□□□□ -1.04
SIK3-211ENST00000485363 PPDPFLQ8WWR9 84 aa8.53□□□□□ -1.04
SIK3-211ENST00000485363 DLEU1O43261 78 aa8.52□□□□□ -1.05
SIK3-211ENST00000485363 RPL37P61927 97 aaKnown RBP8.52□□□□□ -1.05
SIK3-211ENST00000485363 KRTAP19-2Q3LHN2 52 aa8.52□□□□□ -1.05
SIK3-211ENST00000485363 IGFL1Q6UW32 110 aa8.52□□□□□ -1.05
SIK3-211ENST00000485363 TRBV7-7A0A0K0K1E9 115 aa8.51□□□□□ -1.05
SIK3-211ENST00000485363 SNHG12Q9BXW3 62 aa8.51□□□□□ -1.05
SIK3-211ENST00000485363 KRTAP9-6A0A140TA67 174 aa8.48□□□□□ -1.05
SIK3-211ENST00000485363 RAB37Q96AX2 223 aa8.48□□□□□ -1.05
SIK3-211ENST00000485363 CFC1BP0CG36 223 aa8.47□□□□□ -1.05
SIK3-211ENST00000485363 CFC1P0CG37 223 aa8.47□□□□□ -1.05
SIK3-211ENST00000485363 C14orf144Q96I85 54 aa8.47□□□□□ -1.05
SIK3-211ENST00000485363 SNCGO76070 127 aa8.46□□□□□ -1.06
SIK3-211ENST00000485363 MT1HP80294 61 aa8.46□□□□□ -1.06
SIK3-211ENST00000485363 HIGD1BQ9P298 99 aa8.46□□□□□ -1.06
SIK3-211ENST00000485363 PAM16Q9Y3D7 125 aa8.45□□□□□ -1.06
SIK3-211ENST00000485363 A0A0B4J2C4 111 aa8.44□□□□□ -1.06
SIK3-211ENST00000485363 H0YGX0 51 aa8.44□□□□□ -1.06
SIK3-211ENST00000485363 H3BUT2 72 aa8.44□□□□□ -1.06
SIK3-211ENST00000485363 SPATA45Q537H7 98 aa8.44□□□□□ -1.06
SIK3-211ENST00000485363 VAMP8Q9BV40 100 aa8.42□□□□□ -1.06
SIK3-211ENST00000485363 LST1O00453 97 aa8.41□□□□□ -1.06
SIK3-211ENST00000485363 FSIP2Q5CZC0 6907 aa8.41□□□□□ -1.06
SIK3-211ENST00000485363 C2orf91Q6ZV80 131 aa8.4□□□□□ -1.06
SIK3-211ENST00000485363 Q6Q795 121 aa8.39□□□□□ -1.07
SIK3-211ENST00000485363 OBSCN-AS1Q96MR7 158 aa8.39□□□□□ -1.07
SIK3-211ENST00000485363 FAM218AQ96MZ4 157 aa8.39□□□□□ -1.07
SIK3-211ENST00000485363 SS18L2Q9UHA2 77 aa8.39□□□□□ -1.07
SIK3-211ENST00000485363 GHRHP01286 108 aa8.38□□□□□ -1.07
SIK3-211ENST00000485363 NDUFV3P56181 108 aaKnown RBP8.38□□□□□ -1.07
SIK3-211ENST00000485363 COX6B2Q6YFQ2 88 aa8.38□□□□□ -1.07
SIK3-211ENST00000485363 CEND1Q8N111 149 aa8.38□□□□□ -1.07
SIK3-211ENST00000485363 TMEM238LA0A1B0GVL6 79 aa8.37□□□□□ -1.07
SIK3-211ENST00000485363 A6NJY4 79 aa8.37□□□□□ -1.07
SIK3-211ENST00000485363 ATP11AUNQ6ZP68 121 aa8.37□□□□□ -1.07
SIK3-211ENST00000485363 TEN1Q86WV5 123 aa8.37□□□□□ -1.07
SIK3-211ENST00000485363 PRO1854Q9UHT4 67 aa8.37□□□□□ -1.07
SIK3-211ENST00000485363 A0A1B0GX51 115 aa8.36□□□□□ -1.07
SIK3-211ENST00000485363 Q75L30 129 aa8.36□□□□□ -1.07
SIK3-211ENST00000485363 H3BMG7 143 aa8.33□□□□□ -1.08
SIK3-211ENST00000485363 M0R2T5 61 aa8.33□□□□□ -1.08
SIK3-211ENST00000485363 FABP2P12104 132 aa8.33□□□□□ -1.08
SIK3-211ENST00000485363 Q96NJ1 140 aa8.33□□□□□ -1.08
SIK3-211ENST00000485363 FXYD2P54710 66 aa8.32□□□□□ -1.08
SIK3-211ENST00000485363 A0A087WSZ3 146 aa8.31□□□□□ -1.08
SIK3-211ENST00000485363 KRTAP10-6P60371 365 aaPredicted RBP8.31□□□□□ -1.08
SIK3-211ENST00000485363 TRIAP1O43715 76 aa8.3□□□□□ -1.08
SIK3-211ENST00000485363 LORP23490 312 aaPredicted RBP8.3□□□□□ -1.08
SIK3-211ENST00000485363 FLGP20930 4061 aaPredicted RBP8.29□□□□□ -1.08
SIK3-211ENST00000485363 DNAL4O96015 105 aa8.26□□□□□ -1.09
SIK3-211ENST00000485363 HSD52Q0P140 79 aa8.26□□□□□ -1.09
SIK3-211ENST00000485363 C20orf166-AS1Q96NR2 134 aa8.26□□□□□ -1.09
SIK3-211ENST00000485363 CRCT1Q9UGL9 99 aa8.26□□□□□ -1.09
SIK3-211ENST00000485363 H3BQ85 93 aa8.25□□□□□ -1.09
SIK3-211ENST00000485363 PSMB2P49721 201 aa8.25□□□□□ -1.09
SIK3-211ENST00000485363 A0A1W2PNM2 257 aa8.24□□□□□ -1.09
SIK3-211ENST00000485363 A8MUU9 505 aa8.24□□□□□ -1.09
SIK3-211ENST00000485363 ORMDL1Q9P0S3 153 aa8.24□□□□□ -1.09
SIK3-211ENST00000485363 PYY3Q5JQD4 70 aa8.23□□□□□ -1.09
SIK3-211ENST00000485363 ANKRD29Q8N6D5 301 aa8.23□□□□□ -1.09
SIK3-211ENST00000485363 COX6CP09669 75 aa8.22□□□□□ -1.09
SIK3-211ENST00000485363 SIGMAR1Q99720 223 aa8.22□□□□□ -1.09
SIK3-211ENST00000485363 TRBV7-4A0A0J9YYF1 115 aa8.21□□□□□ -1.1
SIK3-211ENST00000485363 K7ERJ3 54 aa8.21□□□□□ -1.1
SIK3-211ENST00000485363 DSCR10P59022 87 aa8.21□□□□□ -1.1
SIK3-211ENST00000485363 TMEM256-PLSCR3K7ERE1 68 aa8.2□□□□□ -1.1
SIK3-211ENST00000485363 A0A1B0GV72 72 aa8.19□□□□□ -1.1
SIK3-211ENST00000485363 IGKV4-1P06312 121 aa8.17□□□□□ -1.1
SIK3-211ENST00000485363 LINC00313P59037 77 aa8.17□□□□□ -1.1
SIK3-211ENST00000485363 UQCR10Q9UDW1 63 aa8.16□□□□□ -1.1
SIK3-211ENST00000485363 TRBV20-1A0A075B6N2 111 aa8.15□□□□□ -1.1
SIK3-211ENST00000485363 CCKP06307 115 aa8.15□□□□□ -1.1
SIK3-211ENST00000485363 UBE2V1Q13404 147 aa8.15□□□□□ -1.1
SIK3-211ENST00000485363 KRTAP3-3Q9BYR6 98 aa8.15□□□□□ -1.1
SIK3-211ENST00000485363 KRTAP3-2Q9BYR7 98 aa8.15□□□□□ -1.1
SIK3-211ENST00000485363 TRACP01848 142 aa8.14□□□□□ -1.11
SIK3-211ENST00000485363 KRTAP16-1A8MUX0 517 aa8.11□□□□□ -1.11
SIK3-211ENST00000485363 DEFB116Q30KQ4 102 aa8.11□□□□□ -1.11
SIK3-211ENST00000485363 LINC00472Q9H8W2 130 aa8.11□□□□□ -1.11
SIK3-211ENST00000485363 SCGB1C2P0DMR2 95 aa8.1□□□□□ -1.11
SIK3-211ENST00000485363 TMA7Q9Y2S6 64 aaKnown RBP8.09□□□□□ -1.11
SIK3-211ENST00000485363 NOTCH2NLQ7Z3S9 236 aa8.08□□□□□ -1.12
SIK3-211ENST00000485363 VPS25Q9BRG1 176 aa8.08□□□□□ -1.12
SIK3-211ENST00000485363 IGHV6-1A0A0B4J1U7 121 aa8.07□□□□□ -1.12
SIK3-211ENST00000485363 RBM3P98179 157 aaKnown RBP8.07□□□□□ -1.12
SIK3-211ENST00000485363 DSCR8Q96T75 97 aa8.07□□□□□ -1.12
SIK3-211ENST00000485363 FAM236DA0A1B0GTK5 79 aa8.02□□□□□ -1.13
SIK3-211ENST00000485363 A0A1B0GVX0 72 aa8.02□□□□□ -1.13
SIK3-211ENST00000485363 C8orf87E5RJ46 101 aa8.02□□□□□ -1.13
SIK3-211ENST00000485363 BAALC-AS2P0C853 105 aa8.02□□□□□ -1.13
SIK3-211ENST00000485363 FAM236CP0DP71 79 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms