RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 HSPG2P98160 4391 aa3.98□□□□□ -1.77
PDZRN3-209ENST00000484487 TCL1BO95988 128 aa3.98□□□□□ -1.77
PDZRN3-209ENST00000484487 Q9BRP9 147 aa3.98□□□□□ -1.77
PDZRN3-209ENST00000484487 CDIP1Q9H305 208 aa3.98□□□□□ -1.77
PDZRN3-209ENST00000484487 FAT1Q14517 4588 aa3.97□□□□□ -1.77
PDZRN3-209ENST00000484487 K7EP34 96 aa3.97□□□□□ -1.77
PDZRN3-209ENST00000484487 SPINK6Q6UWN8 80 aa3.97□□□□□ -1.77
PDZRN3-209ENST00000484487 PPDPFLQ8WWR9 84 aa3.97□□□□□ -1.77
PDZRN3-209ENST00000484487 FAM218AQ96MZ4 157 aa3.97□□□□□ -1.77
PDZRN3-209ENST00000484487 ORMDL1Q9P0S3 153 aa3.97□□□□□ -1.77
PDZRN3-209ENST00000484487 KIAA1109Q2LD37 5005 aa3.96□□□□□ -1.77
PDZRN3-209ENST00000484487 Q6ZQY7 126 aa3.96□□□□□ -1.78
PDZRN3-209ENST00000484487 PKHD1L1Q86WI1 4243 aa3.96□□□□□ -1.78
PDZRN3-209ENST00000484487 SRRM2Q9UQ35 2752 aaKnown RBP3.95□□□□□ -1.78
PDZRN3-209ENST00000484487 IGLV5-48A0A075B6I7 105 aa3.95□□□□□ -1.78
PDZRN3-209ENST00000484487 TEX49A0A1B0GTD5 131 aa3.95□□□□□ -1.78
PDZRN3-209ENST00000484487 C9JAW5 83 aa3.95□□□□□ -1.78
PDZRN3-209ENST00000484487 H3BMG7 143 aa3.95□□□□□ -1.78
PDZRN3-209ENST00000484487 TMEM256-PLSCR3K7ERE1 68 aa3.95□□□□□ -1.78
PDZRN3-209ENST00000484487 ERC2-IT1O76042 136 aa3.95□□□□□ -1.78
PDZRN3-209ENST00000484487 Q5VSD8 79 aa3.95□□□□□ -1.78
PDZRN3-209ENST00000484487 Q8N1X5 172 aa3.95□□□□□ -1.78
PDZRN3-209ENST00000484487 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
PDZRN3-209ENST00000484487 PCLOQ9Y6V0 5065 aa3.94□□□□□ -1.78
PDZRN3-209ENST00000484487 A0A1B0GV90 55 aa3.94□□□□□ -1.78
PDZRN3-209ENST00000484487 H3BT86 120 aa3.94□□□□□ -1.78
PDZRN3-209ENST00000484487 BAALC-AS2P0C853 105 aa3.94□□□□□ -1.78
PDZRN3-209ENST00000484487 DEFB105AQ8NG35 78 aa3.94□□□□□ -1.78
PDZRN3-209ENST00000484487 SPRR4Q96PI1 79 aa3.94□□□□□ -1.78
PDZRN3-209ENST00000484487 F8W1H4 67 aa3.93□□□□□ -1.78
PDZRN3-209ENST00000484487 SPRR1BP22528 89 aa3.93□□□□□ -1.78
PDZRN3-209ENST00000484487 KRTAP10-4P60372 401 aaPredicted RBP3.93□□□□□ -1.78
PDZRN3-209ENST00000484487 UBE2V1Q13404 147 aa3.93□□□□□ -1.78
PDZRN3-209ENST00000484487 GAGE2AQ6NT46 116 aa3.93□□□□□ -1.78
PDZRN3-209ENST00000484487 ST20-AS1Q8NBB2 130 aa3.93□□□□□ -1.78
PDZRN3-209ENST00000484487 LAMTOR3Q9UHA4 124 aa3.93□□□□□ -1.78
PDZRN3-209ENST00000484487 F8WEM9 126 aa3.92□□□□□ -1.78
PDZRN3-209ENST00000484487 FAM229BQ4G0N7 80 aa3.92□□□□□ -1.78
PDZRN3-209ENST00000484487 LINC00483Q53H64 154 aa3.92□□□□□ -1.78
PDZRN3-209ENST00000484487 Q8N377 158 aa3.92□□□□□ -1.78
PDZRN3-209ENST00000484487 ANKRD29Q8N6D5 301 aa3.92□□□□□ -1.78
PDZRN3-209ENST00000484487 HERC2O95714 4834 aa3.92□□□□□ -1.78
PDZRN3-209ENST00000484487 JMJD7-PLA2G4BH0Y9G9 81 aa3.91□□□□□ -1.78
PDZRN3-209ENST00000484487 LINC01547P58512 204 aaPredicted RBP3.91□□□□□ -1.78
PDZRN3-209ENST00000484487 LINC01600Q96MT4 127 aa3.91□□□□□ -1.78
PDZRN3-209ENST00000484487 NDUFV3P56181 108 aaKnown RBP3.9□□□□□ -1.79
PDZRN3-209ENST00000484487 CRYGAP11844 174 aa3.89□□□□□ -1.79
PDZRN3-209ENST00000484487 C21orf62-AS1Q17RA5 79 aa3.89□□□□□ -1.79
PDZRN3-209ENST00000484487 SMIM29Q86T20 159 aa3.89□□□□□ -1.79
PDZRN3-209ENST00000484487 PRO0461Q9UI25 63 aa3.89□□□□□ -1.79
PDZRN3-209ENST00000484487 RBM3P98179 157 aaKnown RBP3.88□□□□□ -1.79
PDZRN3-209ENST00000484487 Q6JHZ5 121 aa3.88□□□□□ -1.79
PDZRN3-209ENST00000484487 SSBP3-AS1Q7Z2R9 100 aa3.88□□□□□ -1.79
PDZRN3-209ENST00000484487 MTURNQ8N3F0 131 aa3.88□□□□□ -1.79
PDZRN3-209ENST00000484487 IGLV8-61A0A075B6I0 122 aa3.87□□□□□ -1.79
PDZRN3-209ENST00000484487 IGLV9-49A0A0B4J1Y8 123 aa3.87□□□□□ -1.79
PDZRN3-209ENST00000484487 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
PDZRN3-209ENST00000484487 PDE6GP18545 87 aa3.87□□□□□ -1.79
PDZRN3-209ENST00000484487 C9orf153Q5TBE3 101 aa3.87□□□□□ -1.79
PDZRN3-209ENST00000484487 TEN1Q86WV5 123 aa3.87□□□□□ -1.79
PDZRN3-209ENST00000484487 Q8NBF4 154 aa3.87□□□□□ -1.79
PDZRN3-209ENST00000484487 DSCR8Q96T75 97 aa3.87□□□□□ -1.79
PDZRN3-209ENST00000484487 C3orf22Q8N5N4 141 aa3.86□□□□□ -1.79
PDZRN3-209ENST00000484487 OBSCN-AS1Q96MR7 158 aa3.86□□□□□ -1.79
PDZRN3-209ENST00000484487 ANAPC11Q9NYG5 84 aa3.86□□□□□ -1.79
PDZRN3-209ENST00000484487 MOBPQ13875 183 aa3.85□□□□□ -1.79
PDZRN3-209ENST00000484487 ETDBQ3ZM63 59 aa3.85□□□□□ -1.79
PDZRN3-209ENST00000484487 TYMSOSQ8TAI1 123 aa3.85□□□□□ -1.79
PDZRN3-209ENST00000484487 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.79
PDZRN3-209ENST00000484487 LOC110117498A0A087WWA1 95 aa3.84□□□□□ -1.79
PDZRN3-209ENST00000484487 A0A087X002 238 aa3.84□□□□□ -1.79
PDZRN3-209ENST00000484487 OXTP01178 125 aa3.84□□□□□ -1.79
PDZRN3-209ENST00000484487 TRBV7-4A0A0J9YYF1 115 aa3.83□□□□□ -1.8
PDZRN3-209ENST00000484487 A0A1B0GV72 72 aa3.83□□□□□ -1.8
PDZRN3-209ENST00000484487 A0A1B0GW54 56 aa3.83□□□□□ -1.8
PDZRN3-209ENST00000484487 CD164Q04900 197 aa3.83□□□□□ -1.8
PDZRN3-209ENST00000484487 KRTAP13-2Q52LG2 175 aa3.83□□□□□ -1.8
PDZRN3-209ENST00000484487 SPAG11AQ6PDA7 123 aa3.83□□□□□ -1.8
PDZRN3-209ENST00000484487 IGFL1Q6UW32 110 aa3.83□□□□□ -1.8
PDZRN3-209ENST00000484487 PRR26Q8N8Z3 221 aa3.83□□□□□ -1.8
PDZRN3-209ENST00000484487 C14orf132Q9NPU4 83 aa3.83□□□□□ -1.8
PDZRN3-209ENST00000484487 FLG2Q5D862 2391 aaPredicted RBP3.82□□□□□ -1.8
PDZRN3-209ENST00000484487 J3QR89 54 aa3.82□□□□□ -1.8
PDZRN3-209ENST00000484487 CCKP06307 115 aa3.82□□□□□ -1.8
PDZRN3-209ENST00000484487 Q6ZQT0 140 aa3.82□□□□□ -1.8
PDZRN3-209ENST00000484487 KRTAP10-8P60410 259 aa3.81□□□□□ -1.8
PDZRN3-209ENST00000484487 Q6Q795 121 aa3.81□□□□□ -1.8
PDZRN3-209ENST00000484487 LINC00304Q8N9R0 145 aa3.81□□□□□ -1.8
PDZRN3-209ENST00000484487 VPS25Q9BRG1 176 aa3.81□□□□□ -1.8
PDZRN3-209ENST00000484487 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
PDZRN3-209ENST00000484487 KRTAP29-1A8MX34 341 aaPredicted RBP3.8□□□□□ -1.8
PDZRN3-209ENST00000484487 SPINK1P00995 79 aa3.8□□□□□ -1.8
PDZRN3-209ENST00000484487 ACYP1P07311 99 aa3.8□□□□□ -1.8
PDZRN3-209ENST00000484487 LRP1Q07954 4544 aaKnown RBP3.8□□□□□ -1.8
PDZRN3-209ENST00000484487 TNXBP22105 4242 aa3.8□□□□□ -1.8
PDZRN3-209ENST00000484487 TRBV7-7A0A0K0K1E9 115 aa3.79□□□□□ -1.8
PDZRN3-209ENST00000484487 A0A1W2PNM2 257 aa3.79□□□□□ -1.8
PDZRN3-209ENST00000484487 RPS29P62273 56 aaKnown RBP3.79□□□□□ -1.8
PDZRN3-209ENST00000484487 LIMD2Q9BT23 127 aa3.79□□□□□ -1.8
PDZRN3-209ENST00000484487 SS18L2Q9UHA2 77 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms