RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SPATA45Q537H7 98 aa7.14□□□□□ -1.27
HDAC1-209ENST00000484305 ASB16-AS1Q495Z4 193 aa7.13□□□□□ -1.27
HDAC1-209ENST00000484305 hADV29S1A0JD25 119 aa7.12□□□□□ -1.27
HDAC1-209ENST00000484305 Q6ZQY7 126 aa7.12□□□□□ -1.27
HDAC1-209ENST00000484305 VAMP8Q9BV40 100 aa7.11□□□□□ -1.27
HDAC1-209ENST00000484305 HIGD1BQ9P298 99 aa7.11□□□□□ -1.27
HDAC1-209ENST00000484305 CFC1BP0CG36 223 aa7.1□□□□□ -1.27
HDAC1-209ENST00000484305 CFC1P0CG37 223 aa7.1□□□□□ -1.27
HDAC1-209ENST00000484305 XP32Q5T750 250 aa7.1□□□□□ -1.27
HDAC1-209ENST00000484305 C2orf91Q6ZV80 131 aa7.1□□□□□ -1.27
HDAC1-209ENST00000484305 FAT4Q6V0I7 4981 aa7.1□□□□□ -1.27
HDAC1-209ENST00000484305 GHRHP01286 108 aa7.09□□□□□ -1.27
HDAC1-209ENST00000484305 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
HDAC1-209ENST00000484305 BVES-AS1Q5T3Y7 98 aa7.09□□□□□ -1.27
HDAC1-209ENST00000484305 Q5XG85 94 aa7.09□□□□□ -1.27
HDAC1-209ENST00000484305 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
HDAC1-209ENST00000484305 F8WEM9 126 aa7.08□□□□□ -1.28
HDAC1-209ENST00000484305 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
HDAC1-209ENST00000484305 C1orf195Q5TG92 126 aa7.07□□□□□ -1.28
HDAC1-209ENST00000484305 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.07□□□□□ -1.28
HDAC1-209ENST00000484305 RAB37Q96AX2 223 aa7.07□□□□□ -1.28
HDAC1-209ENST00000484305 IGLV8-61A0A075B6I0 122 aa7.05□□□□□ -1.28
HDAC1-209ENST00000484305 A0A0B4J2C4 111 aa7.05□□□□□ -1.28
HDAC1-209ENST00000484305 CEND1Q8N111 149 aa7.05□□□□□ -1.28
HDAC1-209ENST00000484305 OCIAD2Q56VL3 154 aa7.04□□□□□ -1.28
HDAC1-209ENST00000484305 PYY3Q5JQD4 70 aa7.03□□□□□ -1.28
HDAC1-209ENST00000484305 Q6JHZ5 121 aa7.03□□□□□ -1.28
HDAC1-209ENST00000484305 IGFL1Q6UW32 110 aa7.03□□□□□ -1.28
HDAC1-209ENST00000484305 TCL1BO95988 128 aa7.02□□□□□ -1.29
HDAC1-209ENST00000484305 PPDPFLQ8WWR9 84 aa7.02□□□□□ -1.29
HDAC1-209ENST00000484305 CLEC2BQ92478 149 aa7.02□□□□□ -1.29
HDAC1-209ENST00000484305 FAM218AQ96MZ4 157 aa7.02□□□□□ -1.29
HDAC1-209ENST00000484305 SNHG12Q9BXW3 62 aa7.02□□□□□ -1.29
HDAC1-209ENST00000484305 H0YGX0 51 aa7.01□□□□□ -1.29
HDAC1-209ENST00000484305 FXYD2P54710 66 aa7.01□□□□□ -1.29
HDAC1-209ENST00000484305 PRO1854Q9UHT4 67 aa7.01□□□□□ -1.29
HDAC1-209ENST00000484305 TRBV7-7A0A0K0K1E9 115 aa6.99□□□□□ -1.29
HDAC1-209ENST00000484305 TMEM238LA0A1B0GVL6 79 aa6.99□□□□□ -1.29
HDAC1-209ENST00000484305 H3BUT2 72 aa6.99□□□□□ -1.29
HDAC1-209ENST00000484305 TMA7Q9Y2S6 64 aaKnown RBP6.99□□□□□ -1.29
HDAC1-209ENST00000484305 SNCGO76070 127 aa6.98□□□□□ -1.29
HDAC1-209ENST00000484305 PCOTHQ58A44 107 aa6.98□□□□□ -1.29
HDAC1-209ENST00000484305 TRIAP1O43715 76 aa6.95□□□□□ -1.3
HDAC1-209ENST00000484305 NDUFV3P56181 108 aaKnown RBP6.95□□□□□ -1.3
HDAC1-209ENST00000484305 HSD52Q0P140 79 aa6.95□□□□□ -1.3
HDAC1-209ENST00000484305 A0A1B0GX51 115 aa6.93□□□□□ -1.3
HDAC1-209ENST00000484305 K7ERJ3 54 aa6.93□□□□□ -1.3
HDAC1-209ENST00000484305 FABP2P12104 132 aa6.91□□□□□ -1.3
HDAC1-209ENST00000484305 RPL37P61927 97 aaKnown RBP6.91□□□□□ -1.3
HDAC1-209ENST00000484305 Q6Q795 121 aa6.91□□□□□ -1.3
HDAC1-209ENST00000484305 UQCR10Q9UDW1 63 aa6.91□□□□□ -1.3
HDAC1-209ENST00000484305 H3BMG7 143 aa6.9□□□□□ -1.3
HDAC1-209ENST00000484305 LST1O00453 97 aa6.89□□□□□ -1.31
HDAC1-209ENST00000484305 PSMB2P49721 201 aa6.89□□□□□ -1.31
HDAC1-209ENST00000484305 KRTAP19-2Q3LHN2 52 aa6.89□□□□□ -1.31
HDAC1-209ENST00000484305 TEN1Q86WV5 123 aa6.89□□□□□ -1.31
HDAC1-209ENST00000484305 SS18L2Q9UHA2 77 aa6.87□□□□□ -1.31
HDAC1-209ENST00000484305 OBSCN-AS1Q96MR7 158 aa6.86□□□□□ -1.31
HDAC1-209ENST00000484305 KRTAP9-2Q9BYQ4 174 aa6.86□□□□□ -1.31
HDAC1-209ENST00000484305 ORMDL1Q9P0S3 153 aa6.86□□□□□ -1.31
HDAC1-209ENST00000484305 A0A087WSZ3 146 aa6.85□□□□□ -1.31
HDAC1-209ENST00000484305 DNAL4O96015 105 aa6.85□□□□□ -1.31
HDAC1-209ENST00000484305 COX6CP09669 75 aa6.85□□□□□ -1.31
HDAC1-209ENST00000484305 A0A1W2PNM2 257 aa6.84□□□□□ -1.31
HDAC1-209ENST00000484305 A0A1B0GV72 72 aa6.83□□□□□ -1.32
HDAC1-209ENST00000484305 Q96NJ1 140 aa6.83□□□□□ -1.32
HDAC1-209ENST00000484305 H3BQ85 93 aa6.81□□□□□ -1.32
HDAC1-209ENST00000484305 TMEM256-PLSCR3K7ERE1 68 aa6.81□□□□□ -1.32
HDAC1-209ENST00000484305 ANKRD29Q8N6D5 301 aa6.81□□□□□ -1.32
HDAC1-209ENST00000484305 Q75L30 129 aa6.8□□□□□ -1.32
HDAC1-209ENST00000484305 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
HDAC1-209ENST00000484305 TRACP01848 142 aa6.79□□□□□ -1.32
HDAC1-209ENST00000484305 SCGB1C2P0DMR2 95 aa6.79□□□□□ -1.32
HDAC1-209ENST00000484305 MT1HP80294 61 aa6.79□□□□□ -1.32
HDAC1-209ENST00000484305 TRBV7-4A0A0J9YYF1 115 aa6.78□□□□□ -1.32
HDAC1-209ENST00000484305 ATP11AUNQ6ZP68 121 aa6.78□□□□□ -1.32
HDAC1-209ENST00000484305 UBE2V1Q13404 147 aa6.77□□□□□ -1.33
HDAC1-209ENST00000484305 CCKP06307 115 aa6.75□□□□□ -1.33
HDAC1-209ENST00000484305 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
HDAC1-209ENST00000484305 SIGMAR1Q99720 223 aa6.75□□□□□ -1.33
HDAC1-209ENST00000484305 DSCR10P59022 87 aa6.74□□□□□ -1.33
HDAC1-209ENST00000484305 A8MUU9 505 aa6.73□□□□□ -1.33
HDAC1-209ENST00000484305 IGKV4-1P06312 121 aa6.73□□□□□ -1.33
HDAC1-209ENST00000484305 M0R143 59 aa6.72□□□□□ -1.33
HDAC1-209ENST00000484305 BAALC-AS2P0C853 105 aa6.72□□□□□ -1.33
HDAC1-209ENST00000484305 SMIM6P0DI80 62 aa6.72□□□□□ -1.33
HDAC1-209ENST00000484305 DEFB116Q30KQ4 102 aa6.72□□□□□ -1.33
HDAC1-209ENST00000484305 COX6B2Q6YFQ2 88 aa6.72□□□□□ -1.33
HDAC1-209ENST00000484305 NAA38Q9BRA0 125 aaKnown RBP6.72□□□□□ -1.33
HDAC1-209ENST00000484305 RBM3P98179 157 aaKnown RBP6.71□□□□□ -1.34
HDAC1-209ENST00000484305 LINC00472Q9H8W2 130 aa6.71□□□□□ -1.34
HDAC1-209ENST00000484305 VPS25Q9BRG1 176 aa6.7□□□□□ -1.34
HDAC1-209ENST00000484305 LINC00313P59037 77 aa6.69□□□□□ -1.34
HDAC1-209ENST00000484305 DSCR8Q96T75 97 aa6.69□□□□□ -1.34
HDAC1-209ENST00000484305 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-209ENST00000484305 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
HDAC1-209ENST00000484305 KRTAP16-1A8MUX0 517 aa6.67□□□□□ -1.34
HDAC1-209ENST00000484305 ATXN8Q156A1 80 aa6.67□□□□□ -1.34
HDAC1-209ENST00000484305 IGHV6-1A0A0B4J1U7 121 aa6.65□□□□□ -1.34
HDAC1-209ENST00000484305 KRTAP9-6A0A140TA67 174 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms