RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 C3orf79P0CE67 100 aa3.51□□□□□ -1.85
PTCD3-215ENST00000484203 KRTDAPP60985 99 aa3.51□□□□□ -1.85
PTCD3-215ENST00000484203 MOBPQ13875 183 aa3.51□□□□□ -1.85
PTCD3-215ENST00000484203 SOSTDC1Q6X4U4 206 aa3.51□□□□□ -1.85
PTCD3-215ENST00000484203 LITAFQ99732 161 aa3.51□□□□□ -1.85
PTCD3-215ENST00000484203 RETNLBQ9BQ08 111 aa3.51□□□□□ -1.85
PTCD3-215ENST00000484203 LAMTOR3Q9UHA4 124 aa3.51□□□□□ -1.85
PTCD3-215ENST00000484203 ERC2-IT1O76042 136 aa3.5□□□□□ -1.85
PTCD3-215ENST00000484203 SPRR1BP22528 89 aa3.5□□□□□ -1.85
PTCD3-215ENST00000484203 COX7BP24311 80 aa3.5□□□□□ -1.85
PTCD3-215ENST00000484203 NPC2P61916 151 aa3.5□□□□□ -1.85
PTCD3-215ENST00000484203 PYY3Q5JQD4 70 aa3.5□□□□□ -1.85
PTCD3-215ENST00000484203 C9orf153Q5TBE3 101 aa3.5□□□□□ -1.85
PTCD3-215ENST00000484203 LIMD2Q9BT23 127 aa3.5□□□□□ -1.85
PTCD3-215ENST00000484203 NHP2Q9NX24 153 aaKnown RBP3.5□□□□□ -1.85
PTCD3-215ENST00000484203 TRAV13-2A0A0B4J235 113 aa3.49□□□□□ -1.85
PTCD3-215ENST00000484203 HSBP1L1C9JCN9 74 aa3.49□□□□□ -1.85
PTCD3-215ENST00000484203 ELOF1P60002 83 aaKnown RBP3.49□□□□□ -1.85
PTCD3-215ENST00000484203 C14orf144Q96I85 54 aa3.49□□□□□ -1.85
PTCD3-215ENST00000484203 TEX49A0A1B0GTD5 131 aa3.48□□□□□ -1.85
PTCD3-215ENST00000484203 A0A1B0GWB2 263 aa3.48□□□□□ -1.85
PTCD3-215ENST00000484203 S100A2P29034 98 aa3.48□□□□□ -1.85
PTCD3-215ENST00000484203 LINC01547P58512 204 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-215ENST00000484203 CD164Q04900 197 aa3.48□□□□□ -1.85
PTCD3-215ENST00000484203 UBE2V1Q13404 147 aa3.48□□□□□ -1.85
PTCD3-215ENST00000484203 TAL2Q16559 108 aa3.48□□□□□ -1.85
PTCD3-215ENST00000484203 C6orf99Q4VX62 202 aa3.48□□□□□ -1.85
PTCD3-215ENST00000484203 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-215ENST00000484203 Q75L30 129 aa3.48□□□□□ -1.85
PTCD3-215ENST00000484203 HIST3H2BBQ8N257 126 aa3.48□□□□□ -1.85
PTCD3-215ENST00000484203 A0A1B0GV90 55 aa3.47□□□□□ -1.85
PTCD3-215ENST00000484203 A6NDN8 102 aa3.47□□□□□ -1.85
PTCD3-215ENST00000484203 VAMP3Q15836 100 aa3.47□□□□□ -1.85
PTCD3-215ENST00000484203 KRTAP13-3Q3SY46 172 aa3.47□□□□□ -1.85
PTCD3-215ENST00000484203 Q8N377 158 aa3.47□□□□□ -1.85
PTCD3-215ENST00000484203 PRO1933Q9H354 126 aa3.47□□□□□ -1.85
PTCD3-215ENST00000484203 ASB16-AS1Q495Z4 193 aa3.46□□□□□ -1.86
PTCD3-215ENST00000484203 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
PTCD3-215ENST00000484203 ST20-AS1Q8NBB2 130 aa3.46□□□□□ -1.86
PTCD3-215ENST00000484203 H7C2G1 150 aa3.45□□□□□ -1.86
PTCD3-215ENST00000484203 Q5XG85 94 aa3.45□□□□□ -1.86
PTCD3-215ENST00000484203 MUSTN1Q8IVN3 82 aa3.45□□□□□ -1.86
PTCD3-215ENST00000484203 TTTY13Q9BZ97 58 aa3.45□□□□□ -1.86
PTCD3-215ENST00000484203 IGLV5-48A0A075B6I7 105 aa3.44□□□□□ -1.86
PTCD3-215ENST00000484203 F8WEM9 126 aa3.44□□□□□ -1.86
PTCD3-215ENST00000484203 TSTD3H0UI37 97 aa3.44□□□□□ -1.86
PTCD3-215ENST00000484203 SNCGO76070 127 aa3.44□□□□□ -1.86
PTCD3-215ENST00000484203 PCP2Q8IVA1 136 aa3.44□□□□□ -1.86
PTCD3-215ENST00000484203 HIST1H2BLQ99880 126 aa3.44□□□□□ -1.86
PTCD3-215ENST00000484203 CFC1BP0CG36 223 aa3.43□□□□□ -1.86
PTCD3-215ENST00000484203 CFC1P0CG37 223 aa3.43□□□□□ -1.86
PTCD3-215ENST00000484203 ATOH7Q8N100 152 aa3.43□□□□□ -1.86
PTCD3-215ENST00000484203 DEFB105AQ8NG35 78 aa3.43□□□□□ -1.86
PTCD3-215ENST00000484203 TCL1BO95988 128 aa3.42□□□□□ -1.86
PTCD3-215ENST00000484203 Q1RN00 199 aa3.42□□□□□ -1.86
PTCD3-215ENST00000484203 BVES-AS1Q5T3Y7 98 aa3.42□□□□□ -1.86
PTCD3-215ENST00000484203 Q6JHZ5 121 aa3.42□□□□□ -1.86
PTCD3-215ENST00000484203 SMIM11BQ8TCY0 68 aa3.42□□□□□ -1.86
PTCD3-215ENST00000484203 PPDPFLQ8WWR9 84 aa3.42□□□□□ -1.86
PTCD3-215ENST00000484203 FAT4Q6V0I7 4981 aa3.41□□□□□ -1.86
PTCD3-215ENST00000484203 hADV29S1A0JD25 119 aa3.4□□□□□ -1.87
PTCD3-215ENST00000484203 DLEU1O43261 78 aa3.4□□□□□ -1.87
PTCD3-215ENST00000484203 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
PTCD3-215ENST00000484203 HRCT1Q6UXD1 115 aa3.4□□□□□ -1.87
PTCD3-215ENST00000484203 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.4□□□□□ -1.87
PTCD3-215ENST00000484203 LINC00575Q6W349 94 aa3.4□□□□□ -1.87
PTCD3-215ENST00000484203 HIST1H4GQ99525 98 aa3.4□□□□□ -1.87
PTCD3-215ENST00000484203 SNHG12Q9BXW3 62 aa3.4□□□□□ -1.87
PTCD3-215ENST00000484203 MUC17Q685J3 4493 aa3.4□□□□□ -1.87
PTCD3-215ENST00000484203 OCIAD2Q56VL3 154 aa3.39□□□□□ -1.87
PTCD3-215ENST00000484203 IGLV8-61A0A075B6I0 122 aa3.38□□□□□ -1.87
PTCD3-215ENST00000484203 H0YGX0 51 aa3.38□□□□□ -1.87
PTCD3-215ENST00000484203 M0R143 59 aa3.38□□□□□ -1.87
PTCD3-215ENST00000484203 COX8AP10176 69 aa3.38□□□□□ -1.87
PTCD3-215ENST00000484203 Q6ZQY7 126 aa3.37□□□□□ -1.87
PTCD3-215ENST00000484203 CLEC2BQ92478 149 aa3.37□□□□□ -1.87
PTCD3-215ENST00000484203 RAB37Q96AX2 223 aa3.37□□□□□ -1.87
PTCD3-215ENST00000484203 HIGD1BQ9P298 99 aa3.37□□□□□ -1.87
PTCD3-215ENST00000484203 C1orf195Q5TG92 126 aa3.36□□□□□ -1.87
PTCD3-215ENST00000484203 A0A0B4J2C4 111 aa3.35□□□□□ -1.87
PTCD3-215ENST00000484203 TRBV7-7A0A0K0K1E9 115 aa3.35□□□□□ -1.87
PTCD3-215ENST00000484203 A0A1B0GX51 115 aa3.35□□□□□ -1.87
PTCD3-215ENST00000484203 H3BQ85 93 aa3.35□□□□□ -1.87
PTCD3-215ENST00000484203 VAMP8Q9BV40 100 aa3.35□□□□□ -1.87
PTCD3-215ENST00000484203 SS18L2Q9UHA2 77 aa3.35□□□□□ -1.87
PTCD3-215ENST00000484203 C9orf92A6NGG3 77 aa3.34□□□□□ -1.87
PTCD3-215ENST00000484203 LST1O00453 97 aa3.33□□□□□ -1.88
PTCD3-215ENST00000484203 SPATA45Q537H7 98 aa3.33□□□□□ -1.88
PTCD3-215ENST00000484203 PCOTHQ58A44 107 aa3.33□□□□□ -1.88
PTCD3-215ENST00000484203 Q6Q795 121 aa3.33□□□□□ -1.88
PTCD3-215ENST00000484203 RPL37P61927 97 aaKnown RBP3.32□□□□□ -1.88
PTCD3-215ENST00000484203 COL5A1-AS1Q5SY13 56 aa3.32□□□□□ -1.88
PTCD3-215ENST00000484203 IGFL1Q6UW32 110 aa3.32□□□□□ -1.88
PTCD3-215ENST00000484203 PRO1854Q9UHT4 67 aa3.32□□□□□ -1.88
PTCD3-215ENST00000484203 COX6CP09669 75 aa3.31□□□□□ -1.88
PTCD3-215ENST00000484203 NDUFV3P56181 108 aaKnown RBP3.31□□□□□ -1.88
PTCD3-215ENST00000484203 ATP11AUNQ6ZP68 121 aa3.31□□□□□ -1.88
PTCD3-215ENST00000484203 NOTCH2NLQ7Z3S9 236 aa3.31□□□□□ -1.88
PTCD3-215ENST00000484203 TEN1Q86WV5 123 aa3.31□□□□□ -1.88
PTCD3-215ENST00000484203 CEND1Q8N111 149 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms