RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 CTAG1AP78358 180 aa5.21□□□□□ -1.58
COL8A1-207ENST00000483969 TAL2Q16559 108 aa5.21□□□□□ -1.58
COL8A1-207ENST00000483969 SMIM11BQ8TCY0 68 aa5.21□□□□□ -1.58
COL8A1-207ENST00000483969 TSPAN13O95857 204 aa5.2□□□□□ -1.58
COL8A1-207ENST00000483969 SPAG11AQ6PDA7 123 aa5.2□□□□□ -1.58
COL8A1-207ENST00000483969 SSBP3-AS1Q7Z2R9 100 aa5.2□□□□□ -1.58
COL8A1-207ENST00000483969 C3orf22Q8N5N4 141 aa5.2□□□□□ -1.58
COL8A1-207ENST00000483969 LINC00304Q8N9R0 145 aa5.2□□□□□ -1.58
COL8A1-207ENST00000483969 NHP2Q9NX24 153 aaKnown RBP5.2□□□□□ -1.58
COL8A1-207ENST00000483969 SLC25A20O43772 301 aa5.19□□□□□ -1.58
COL8A1-207ENST00000483969 C2orf91Q6ZV80 131 aa5.19□□□□□ -1.58
COL8A1-207ENST00000483969 ST20-AS1Q8NBB2 130 aa5.19□□□□□ -1.58
COL8A1-207ENST00000483969 RAB37Q96AX2 223 aa5.19□□□□□ -1.58
COL8A1-207ENST00000483969 TNXBP22105 4242 aa5.19□□□□□ -1.58
COL8A1-207ENST00000483969 CEND1Q8N111 149 aa5.18□□□□□ -1.58
COL8A1-207ENST00000483969 C12orf57Q99622 126 aa5.18□□□□□ -1.58
COL8A1-207ENST00000483969 IGLV9-49A0A0B4J1Y8 123 aa5.17□□□□□ -1.58
COL8A1-207ENST00000483969 TEX49A0A1B0GTD5 131 aa5.17□□□□□ -1.58
COL8A1-207ENST00000483969 CFC1BP0CG36 223 aa5.17□□□□□ -1.58
COL8A1-207ENST00000483969 CFC1P0CG37 223 aa5.17□□□□□ -1.58
COL8A1-207ENST00000483969 SPRR1BP22528 89 aa5.17□□□□□ -1.58
COL8A1-207ENST00000483969 DEFB105AQ8NG35 78 aa5.17□□□□□ -1.58
COL8A1-207ENST00000483969 LAMTOR3Q9UHA4 124 aa5.17□□□□□ -1.58
COL8A1-207ENST00000483969 A0A0B4J2C4 111 aa5.16□□□□□ -1.58
COL8A1-207ENST00000483969 SNCGO76070 127 aa5.16□□□□□ -1.58
COL8A1-207ENST00000483969 BVES-AS1Q5T3Y7 98 aa5.16□□□□□ -1.58
COL8A1-207ENST00000483969 UQCR10Q9UDW1 63 aa5.16□□□□□ -1.58
COL8A1-207ENST00000483969 hADV29S1A0JD25 119 aa5.15□□□□□ -1.59
COL8A1-207ENST00000483969 SPINK1P00995 79 aa5.15□□□□□ -1.59
COL8A1-207ENST00000483969 HSD52Q0P140 79 aa5.15□□□□□ -1.59
COL8A1-207ENST00000483969 MOBPQ13875 183 aa5.15□□□□□ -1.59
COL8A1-207ENST00000483969 PRR4Q16378 134 aa5.15□□□□□ -1.59
COL8A1-207ENST00000483969 C9orf153Q5TBE3 101 aa5.15□□□□□ -1.59
COL8A1-207ENST00000483969 LINC00575Q6W349 94 aa5.15□□□□□ -1.59
COL8A1-207ENST00000483969 Q8NBF4 154 aa5.15□□□□□ -1.59
COL8A1-207ENST00000483969 H0YGX0 51 aa5.14□□□□□ -1.59
COL8A1-207ENST00000483969 H7C2G1 150 aa5.14□□□□□ -1.59
COL8A1-207ENST00000483969 PRO1854Q9UHT4 67 aa5.14□□□□□ -1.59
COL8A1-207ENST00000483969 Q1RN00 199 aa5.13□□□□□ -1.59
COL8A1-207ENST00000483969 IGLV5-48A0A075B6I7 105 aa5.12□□□□□ -1.59
COL8A1-207ENST00000483969 FXYD2P54710 66 aa5.12□□□□□ -1.59
COL8A1-207ENST00000483969 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.11□□□□□ -1.59
COL8A1-207ENST00000483969 PRO1933Q9H354 126 aa5.11□□□□□ -1.59
COL8A1-207ENST00000483969 SMIM6P0DI80 62 aa5.1□□□□□ -1.59
COL8A1-207ENST00000483969 LINC01547P58512 204 aaPredicted RBP5.1□□□□□ -1.59
COL8A1-207ENST00000483969 RPS29P62273 56 aaKnown RBP5.1□□□□□ -1.59
COL8A1-207ENST00000483969 Q6ZQY7 126 aa5.1□□□□□ -1.59
COL8A1-207ENST00000483969 SMIM29Q86T20 159 aa5.1□□□□□ -1.59
COL8A1-207ENST00000483969 Q8N377 158 aa5.1□□□□□ -1.59
COL8A1-207ENST00000483969 HMCN2Q8NDA2 5059 aa5.1□□□□□ -1.59
COL8A1-207ENST00000483969 F8WEM9 126 aa5.09□□□□□ -1.59
COL8A1-207ENST00000483969 OCIAD2Q56VL3 154 aa5.09□□□□□ -1.59
COL8A1-207ENST00000483969 PPDPFLQ8WWR9 84 aa5.09□□□□□ -1.59
COL8A1-207ENST00000483969 A0A1B0GX51 115 aa5.08□□□□□ -1.6
COL8A1-207ENST00000483969 COX6CP09669 75 aa5.08□□□□□ -1.6
COL8A1-207ENST00000483969 PSMB2P49721 201 aa5.08□□□□□ -1.6
COL8A1-207ENST00000483969 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
COL8A1-207ENST00000483969 RETNLBQ9BQ08 111 aa5.08□□□□□ -1.6
COL8A1-207ENST00000483969 SNHG12Q9BXW3 62 aa5.08□□□□□ -1.6
COL8A1-207ENST00000483969 IGLV7-46A0A075B6I9 117 aa5.07□□□□□ -1.6
COL8A1-207ENST00000483969 CD164Q04900 197 aa5.07□□□□□ -1.6
COL8A1-207ENST00000483969 FP248Q71RG6 208 aaPredicted RBP5.07□□□□□ -1.6
COL8A1-207ENST00000483969 LOC105371267A0A1B0GV96 52 aa5.06□□□□□ -1.6
COL8A1-207ENST00000483969 LIMD2Q9BT23 127 aa5.06□□□□□ -1.6
COL8A1-207ENST00000483969 TSTD3H0UI37 97 aa5.05□□□□□ -1.6
COL8A1-207ENST00000483969 K7ERJ3 54 aa5.05□□□□□ -1.6
COL8A1-207ENST00000483969 M0R143 59 aa5.05□□□□□ -1.6
COL8A1-207ENST00000483969 Q6JHZ5 121 aa5.05□□□□□ -1.6
COL8A1-207ENST00000483969 HRCT1Q6UXD1 115 aa5.05□□□□□ -1.6
COL8A1-207ENST00000483969 H3BQ85 93 aa5.04□□□□□ -1.6
COL8A1-207ENST00000483969 SCGB1C2P0DMR2 95 aa5.04□□□□□ -1.6
COL8A1-207ENST00000483969 FAM218AQ96MZ4 157 aa5.03□□□□□ -1.6
COL8A1-207ENST00000483969 IGLV8-61A0A075B6I0 122 aa5.02□□□□□ -1.61
COL8A1-207ENST00000483969 DNAL4O96015 105 aa5.02□□□□□ -1.61
COL8A1-207ENST00000483969 TPRXLQ17RH7 258 aa5.02□□□□□ -1.61
COL8A1-207ENST00000483969 FABP2P12104 132 aa5.01□□□□□ -1.61
COL8A1-207ENST00000483969 NDUFV3P56181 108 aaKnown RBP5.01□□□□□ -1.61
COL8A1-207ENST00000483969 Q5XG85 94 aa5.01□□□□□ -1.61
COL8A1-207ENST00000483969 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
COL8A1-207ENST00000483969 CLEC2BQ92478 149 aa5.01□□□□□ -1.61
COL8A1-207ENST00000483969 TCL1BO95988 128 aa5□□□□□ -1.61
COL8A1-207ENST00000483969 ORMDL1Q9P0S3 153 aa5□□□□□ -1.61
COL8A1-207ENST00000483969 A0A0G2JQZ4 141 aa4.99□□□□□ -1.61
COL8A1-207ENST00000483969 TMEM256-PLSCR3K7ERE1 68 aa4.99□□□□□ -1.61
COL8A1-207ENST00000483969 IGFL1Q6UW32 110 aa4.99□□□□□ -1.61
COL8A1-207ENST00000483969 H3BMG7 143 aa4.98□□□□□ -1.61
COL8A1-207ENST00000483969 TRACP01848 142 aa4.98□□□□□ -1.61
COL8A1-207ENST00000483969 H3BUT2 72 aa4.97□□□□□ -1.61
COL8A1-207ENST00000483969 TRBV7-7A0A0K0K1E9 115 aa4.96□□□□□ -1.62
COL8A1-207ENST00000483969 LST1O00453 97 aa4.96□□□□□ -1.62
COL8A1-207ENST00000483969 KRTAP13-3Q3SY46 172 aa4.96□□□□□ -1.62
COL8A1-207ENST00000483969 UBE2V1Q13404 147 aa4.95□□□□□ -1.62
COL8A1-207ENST00000483969 BATFQ16520 125 aa4.95□□□□□ -1.62
COL8A1-207ENST00000483969 C1orf195Q5TG92 126 aa4.95□□□□□ -1.62
COL8A1-207ENST00000483969 LYRM7Q5U5X0 104 aa4.95□□□□□ -1.62
COL8A1-207ENST00000483969 TEN1Q86WV5 123 aa4.95□□□□□ -1.62
COL8A1-207ENST00000483969 ANKRD29Q8N6D5 301 aa4.95□□□□□ -1.62
COL8A1-207ENST00000483969 ATXN8Q156A1 80 aa4.94□□□□□ -1.62
COL8A1-207ENST00000483969 ASB16-AS1Q495Z4 193 aa4.94□□□□□ -1.62
COL8A1-207ENST00000483969 Q6Q795 121 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms