RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CHCHD1Q96BP2 118 aaKnown RBP5.48□□□□□ -1.53
SMARCC1-205ENST00000483847 KRTAP19-6Q3LI70 58 aa5.47□□□□□ -1.53
SMARCC1-205ENST00000483847 SPANXCQ9NY87 97 aa5.47□□□□□ -1.53
SMARCC1-205ENST00000483847 IGLV5-48A0A075B6I7 105 aa5.46□□□□□ -1.54
SMARCC1-205ENST00000483847 FABP4P15090 132 aa5.46□□□□□ -1.54
SMARCC1-205ENST00000483847 KRTAP6-3Q3LI67 103 aa5.46□□□□□ -1.54
SMARCC1-205ENST00000483847 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
SMARCC1-205ENST00000483847 PMCHL2Q9BQD1 86 aa5.46□□□□□ -1.54
SMARCC1-205ENST00000483847 TSTD3H0UI37 97 aa5.45□□□□□ -1.54
SMARCC1-205ENST00000483847 PLNP26678 52 aa5.45□□□□□ -1.54
SMARCC1-205ENST00000483847 PYY3Q5JQD4 70 aa5.45□□□□□ -1.54
SMARCC1-205ENST00000483847 LINC00308Q8TCZ7 52 aa5.45□□□□□ -1.54
SMARCC1-205ENST00000483847 LITAFQ99732 161 aa5.45□□□□□ -1.54
SMARCC1-205ENST00000483847 HIST1H2BLQ99880 126 aa5.45□□□□□ -1.54
SMARCC1-205ENST00000483847 SPANXDQ9BXN6 97 aa5.45□□□□□ -1.54
SMARCC1-205ENST00000483847 HERVK_113P61574 105 aa5.44□□□□□ -1.54
SMARCC1-205ENST00000483847 TRBV20-1A0A075B6N2 111 aa5.43□□□□□ -1.54
SMARCC1-205ENST00000483847 HSBP1O75506 76 aa5.43□□□□□ -1.54
SMARCC1-205ENST00000483847 DPM2O94777 84 aa5.43□□□□□ -1.54
SMARCC1-205ENST00000483847 C9orf118A6NHY6 69 aa5.42□□□□□ -1.54
SMARCC1-205ENST00000483847 Q96NJ1 140 aa5.42□□□□□ -1.54
SMARCC1-205ENST00000483847 LINC00846Q9NV44 126 aa5.42□□□□□ -1.54
SMARCC1-205ENST00000483847 TRBV7-6A0A0J9YX20 115 aa5.4□□□□□ -1.54
SMARCC1-205ENST00000483847 LEPROTL1O95214 131 aa5.4□□□□□ -1.54
SMARCC1-205ENST00000483847 IGKCP01834 107 aa5.4□□□□□ -1.54
SMARCC1-205ENST00000483847 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
SMARCC1-205ENST00000483847 TRBV7-7A0A0K0K1E9 115 aa5.38□□□□□ -1.55
SMARCC1-205ENST00000483847 FAM236DA0A1B0GTK5 79 aa5.38□□□□□ -1.55
SMARCC1-205ENST00000483847 A0A1B0GWB2 263 aa5.38□□□□□ -1.55
SMARCC1-205ENST00000483847 A8MUU9 505 aa5.38□□□□□ -1.55
SMARCC1-205ENST00000483847 E9PLD3 99 aa5.38□□□□□ -1.55
SMARCC1-205ENST00000483847 SCGB1D1O95968 90 aa5.38□□□□□ -1.55
SMARCC1-205ENST00000483847 FAM236CP0DP71 79 aa5.38□□□□□ -1.55
SMARCC1-205ENST00000483847 IGFL1Q6UW32 110 aa5.38□□□□□ -1.55
SMARCC1-205ENST00000483847 KRTAP16-1A8MUX0 517 aa5.36□□□□□ -1.55
SMARCC1-205ENST00000483847 TIMM17BO60830 172 aa5.36□□□□□ -1.55
SMARCC1-205ENST00000483847 F8WEM9 126 aa5.35□□□□□ -1.55
SMARCC1-205ENST00000483847 SERF1AO75920 110 aa5.35□□□□□ -1.55
SMARCC1-205ENST00000483847 CLEC2BQ92478 149 aa5.34□□□□□ -1.55
SMARCC1-205ENST00000483847 C14orf144Q96I85 54 aa5.34□□□□□ -1.55
SMARCC1-205ENST00000483847 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
SMARCC1-205ENST00000483847 VAMP8Q9BV40 100 aa5.33□□□□□ -1.56
SMARCC1-205ENST00000483847 TTTY13Q9BZ97 58 aa5.33□□□□□ -1.56
SMARCC1-205ENST00000483847 HSPB8Q9UJY1 196 aa5.33□□□□□ -1.56
SMARCC1-205ENST00000483847 A6NDN8 102 aa5.32□□□□□ -1.56
SMARCC1-205ENST00000483847 HRES1P13985 223 aa5.32□□□□□ -1.56
SMARCC1-205ENST00000483847 Q6JHZ5 121 aa5.32□□□□□ -1.56
SMARCC1-205ENST00000483847 A4D1N5 150 aa5.31□□□□□ -1.56
SMARCC1-205ENST00000483847 ZNF815PA8K554 130 aa5.31□□□□□ -1.56
SMARCC1-205ENST00000483847 LST1O00453 97 aa5.31□□□□□ -1.56
SMARCC1-205ENST00000483847 KRTDAPP60985 99 aa5.31□□□□□ -1.56
SMARCC1-205ENST00000483847 NHP2Q9NX24 153 aaKnown RBP5.31□□□□□ -1.56
SMARCC1-205ENST00000483847 M0R143 59 aa5.3□□□□□ -1.56
SMARCC1-205ENST00000483847 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
SMARCC1-205ENST00000483847 OCIAD2Q56VL3 154 aa5.29□□□□□ -1.56
SMARCC1-205ENST00000483847 SMIM11BQ8TCY0 68 aa5.29□□□□□ -1.56
SMARCC1-205ENST00000483847 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
SMARCC1-205ENST00000483847 C3orf79P0CE67 100 aa5.28□□□□□ -1.56
SMARCC1-205ENST00000483847 DSCR10P59022 87 aa5.28□□□□□ -1.56
SMARCC1-205ENST00000483847 Q6ZQY7 126 aa5.28□□□□□ -1.56
SMARCC1-205ENST00000483847 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
SMARCC1-205ENST00000483847 RBM12B-AS1Q9P1G2 102 aa5.28□□□□□ -1.56
SMARCC1-205ENST00000483847 TRAV13-2A0A0B4J235 113 aa5.27□□□□□ -1.57
SMARCC1-205ENST00000483847 UQCR10Q9UDW1 63 aa5.27□□□□□ -1.57
SMARCC1-205ENST00000483847 PAM16Q9Y3D7 125 aa5.27□□□□□ -1.57
SMARCC1-205ENST00000483847 A0A1B0GV90 55 aa5.26□□□□□ -1.57
SMARCC1-205ENST00000483847 SPATA45Q537H7 98 aa5.26□□□□□ -1.57
SMARCC1-205ENST00000483847 LINC00575Q6W349 94 aa5.26□□□□□ -1.57
SMARCC1-205ENST00000483847 H3BUT2 72 aa5.25□□□□□ -1.57
SMARCC1-205ENST00000483847 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
SMARCC1-205ENST00000483847 NOTCH2NLQ7Z3S9 236 aa5.25□□□□□ -1.57
SMARCC1-205ENST00000483847 SNHG12Q9BXW3 62 aa5.25□□□□□ -1.57
SMARCC1-205ENST00000483847 HSBP1L1C9JCN9 74 aa5.24□□□□□ -1.57
SMARCC1-205ENST00000483847 SYS1-DBNDD2H3BUS1 97 aa5.24□□□□□ -1.57
SMARCC1-205ENST00000483847 PET117Q6UWS5 81 aa5.24□□□□□ -1.57
SMARCC1-205ENST00000483847 MUSTN1Q8IVN3 82 aa5.24□□□□□ -1.57
SMARCC1-205ENST00000483847 COL5A1-AS1Q5SY13 56 aa5.23□□□□□ -1.57
SMARCC1-205ENST00000483847 Q8N9P0 234 aaPredicted RBP5.23□□□□□ -1.57
SMARCC1-205ENST00000483847 hADV29S1A0JD25 119 aa5.22□□□□□ -1.57
SMARCC1-205ENST00000483847 IFITM1P13164 125 aa5.22□□□□□ -1.57
SMARCC1-205ENST00000483847 LINC01545Q5VT33 79 aa5.22□□□□□ -1.57
SMARCC1-205ENST00000483847 SCGB1D4Q6XE38 83 aa5.22□□□□□ -1.57
SMARCC1-205ENST00000483847 SS18L2Q9UHA2 77 aa5.21□□□□□ -1.58
SMARCC1-205ENST00000483847 VAMP3Q15836 100 aa5.2□□□□□ -1.58
SMARCC1-205ENST00000483847 COPS9Q8WXC6 57 aa5.2□□□□□ -1.58
SMARCC1-205ENST00000483847 BATFQ16520 125 aa5.19□□□□□ -1.58
SMARCC1-205ENST00000483847 Q6ZVH6 145 aa5.19□□□□□ -1.58
SMARCC1-205ENST00000483847 ATOH7Q8N100 152 aa5.19□□□□□ -1.58
SMARCC1-205ENST00000483847 A0A087WSZ3 146 aa5.18□□□□□ -1.58
SMARCC1-205ENST00000483847 LINC00313P59037 77 aa5.17□□□□□ -1.58
SMARCC1-205ENST00000483847 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.17□□□□□ -1.58
SMARCC1-205ENST00000483847 SIGMAR1Q99720 223 aa5.17□□□□□ -1.58
SMARCC1-205ENST00000483847 A8MWP4 228 aa5.16□□□□□ -1.58
SMARCC1-205ENST00000483847 DLEU1O43261 78 aa5.16□□□□□ -1.58
SMARCC1-205ENST00000483847 TEN1Q86WV5 123 aa5.15□□□□□ -1.59
SMARCC1-205ENST00000483847 MTURNQ8N3F0 131 aa5.15□□□□□ -1.59
SMARCC1-205ENST00000483847 PPDPFLQ8WWR9 84 aa5.15□□□□□ -1.59
SMARCC1-205ENST00000483847 COX8AP10176 69 aa5.14□□□□□ -1.59
SMARCC1-205ENST00000483847 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
SMARCC1-205ENST00000483847 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms