RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 Q6ZQY7 126 aa10.69□□□□□ -0.7
HPS4-213ENST00000483631 S100A6P06703 90 aa10.68□□□□□ -0.7
HPS4-213ENST00000483631 S100A1P23297 94 aa10.67□□□□□ -0.7
HPS4-213ENST00000483631 PPDPFLQ8WWR9 84 aa10.67□□□□□ -0.7
HPS4-213ENST00000483631 RPL37P61927 97 aaKnown RBP10.66□□□□□ -0.7
HPS4-213ENST00000483631 BVES-AS1Q5T3Y7 98 aa10.66□□□□□ -0.7
HPS4-213ENST00000483631 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.66□□□□□ -0.7
HPS4-213ENST00000483631 LCE2DQ5TA82 110 aaPredicted RBP10.65□□□□□ -0.7
HPS4-213ENST00000483631 CLEC2BQ92478 149 aa10.65□□□□□ -0.7
HPS4-213ENST00000483631 CRCT1Q9UGL9 99 aa10.63□□□□□ -0.71
HPS4-213ENST00000483631 DLEU1O43261 78 aa10.62□□□□□ -0.71
HPS4-213ENST00000483631 OCIAD2Q56VL3 154 aa10.62□□□□□ -0.71
HPS4-213ENST00000483631 HIST1H4GQ99525 98 aa10.62□□□□□ -0.71
HPS4-213ENST00000483631 TRBV7-7A0A0K0K1E9 115 aa10.61□□□□□ -0.71
HPS4-213ENST00000483631 COX8AP10176 69 aa10.61□□□□□ -0.71
HPS4-213ENST00000483631 IGFL1Q6UW32 110 aa10.61□□□□□ -0.71
HPS4-213ENST00000483631 SCGB1D1O95968 90 aa10.59□□□□□ -0.71
HPS4-213ENST00000483631 CFC1BP0CG36 223 aa10.59□□□□□ -0.71
HPS4-213ENST00000483631 MT1HP80294 61 aa10.59□□□□□ -0.71
HPS4-213ENST00000483631 C12orf57Q99622 126 aa10.56□□□□□ -0.72
HPS4-213ENST00000483631 SNHG12Q9BXW3 62 aa10.55□□□□□ -0.72
HPS4-213ENST00000483631 SNCGO76070 127 aa10.53□□□□□ -0.72
HPS4-213ENST00000483631 HIGD1BQ9P298 99 aa10.53□□□□□ -0.72
HPS4-213ENST00000483631 H0YGX0 51 aa10.51□□□□□ -0.73
HPS4-213ENST00000483631 CFC1P0CG37 223 aa10.51□□□□□ -0.73
HPS4-213ENST00000483631 A0A0B4J2C4 111 aa10.5□□□□□ -0.73
HPS4-213ENST00000483631 Q6Q795 121 aa10.5□□□□□ -0.73
HPS4-213ENST00000483631 RAB37Q96AX2 223 aa10.49□□□□□ -0.73
HPS4-213ENST00000483631 LST1O00453 97 aa10.48□□□□□ -0.73
HPS4-213ENST00000483631 SS18L2Q9UHA2 77 aa10.48□□□□□ -0.73
HPS4-213ENST00000483631 Q75L30 129 aa10.47□□□□□ -0.73
HPS4-213ENST00000483631 H3BUT2 72 aa10.46□□□□□ -0.73
HPS4-213ENST00000483631 GHRHP01286 108 aa10.46□□□□□ -0.73
HPS4-213ENST00000483631 C14orf144Q96I85 54 aa10.46□□□□□ -0.73
HPS4-213ENST00000483631 A0A1B0GX51 115 aa10.45□□□□□ -0.74
HPS4-213ENST00000483631 LORP23490 312 aaPredicted RBP10.44□□□□□ -0.74
HPS4-213ENST00000483631 COX6B2Q6YFQ2 88 aa10.44□□□□□ -0.74
HPS4-213ENST00000483631 OBSCN-AS1Q96MR7 158 aa10.44□□□□□ -0.74
HPS4-213ENST00000483631 SPATA45Q537H7 98 aa10.43□□□□□ -0.74
HPS4-213ENST00000483631 ATP11AUNQ6ZP68 121 aa10.43□□□□□ -0.74
HPS4-213ENST00000483631 TEN1Q86WV5 123 aa10.43□□□□□ -0.74
HPS4-213ENST00000483631 PAM16Q9Y3D7 125 aa10.43□□□□□ -0.74
HPS4-213ENST00000483631 NDUFV3P56181 108 aaKnown RBP10.42□□□□□ -0.74
HPS4-213ENST00000483631 KRTAP10-6P60371 365 aaPredicted RBP10.41□□□□□ -0.74
HPS4-213ENST00000483631 C2orf91Q6ZV80 131 aa10.41□□□□□ -0.74
HPS4-213ENST00000483631 FAM218AQ96MZ4 157 aa10.41□□□□□ -0.74
HPS4-213ENST00000483631 VAMP8Q9BV40 100 aa10.41□□□□□ -0.74
HPS4-213ENST00000483631 TMEM238LA0A1B0GVL6 79 aa10.4□□□□□ -0.74
HPS4-213ENST00000483631 A6NJY4 79 aa10.4□□□□□ -0.74
HPS4-213ENST00000483631 CEND1Q8N111 149 aa10.39□□□□□ -0.75
HPS4-213ENST00000483631 PRO1854Q9UHT4 67 aa10.38□□□□□ -0.75
HPS4-213ENST00000483631 M0R2T5 61 aa10.37□□□□□ -0.75
HPS4-213ENST00000483631 FLGP20930 4061 aaPredicted RBP10.36□□□□□ -0.75
HPS4-213ENST00000483631 H3BMG7 143 aa10.34□□□□□ -0.75
HPS4-213ENST00000483631 Q96NJ1 140 aa10.34□□□□□ -0.75
HPS4-213ENST00000483631 C20orf166-AS1Q96NR2 134 aa10.34□□□□□ -0.75
HPS4-213ENST00000483631 A0A087WSZ3 146 aa10.33□□□□□ -0.76
HPS4-213ENST00000483631 A8MUU9 505 aa10.31□□□□□ -0.76
HPS4-213ENST00000483631 H3BQ85 93 aa10.3□□□□□ -0.76
HPS4-213ENST00000483631 FABP2P12104 132 aa10.3□□□□□ -0.76
HPS4-213ENST00000483631 FXYD2P54710 66 aa10.3□□□□□ -0.76
HPS4-213ENST00000483631 TRIAP1O43715 76 aa10.28□□□□□ -0.76
HPS4-213ENST00000483631 A0A1W2PNM2 257 aa10.25□□□□□ -0.77
HPS4-213ENST00000483631 DNAL4O96015 105 aa10.25□□□□□ -0.77
HPS4-213ENST00000483631 TRBV7-4A0A0J9YYF1 115 aa10.24□□□□□ -0.77
HPS4-213ENST00000483631 ORMDL1Q9P0S3 153 aa10.24□□□□□ -0.77
HPS4-213ENST00000483631 HSD52Q0P140 79 aa10.23□□□□□ -0.77
HPS4-213ENST00000483631 ANKRD29Q8N6D5 301 aa10.22□□□□□ -0.77
HPS4-213ENST00000483631 TMEM256-PLSCR3K7ERE1 68 aa10.21□□□□□ -0.77
HPS4-213ENST00000483631 COX6CP09669 75 aa10.21□□□□□ -0.77
HPS4-213ENST00000483631 SIGMAR1Q99720 223 aa10.19□□□□□ -0.78
HPS4-213ENST00000483631 PSMB2P49721 201 aa10.18□□□□□ -0.78
HPS4-213ENST00000483631 PYY3Q5JQD4 70 aa10.18□□□□□ -0.78
HPS4-213ENST00000483631 TRBV20-1A0A075B6N2 111 aa10.17□□□□□ -0.78
HPS4-213ENST00000483631 DSCR10P59022 87 aa10.17□□□□□ -0.78
HPS4-213ENST00000483631 LINC00313P59037 77 aa10.17□□□□□ -0.78
HPS4-213ENST00000483631 IGKV4-1P06312 121 aa10.15□□□□□ -0.78
HPS4-213ENST00000483631 UBE2V1Q13404 147 aa10.14□□□□□ -0.79
HPS4-213ENST00000483631 K7ERJ3 54 aa10.13□□□□□ -0.79
HPS4-213ENST00000483631 LINC00472Q9H8W2 130 aa10.12□□□□□ -0.79
HPS4-213ENST00000483631 KRTAP16-1A8MUX0 517 aa10.11□□□□□ -0.79
HPS4-213ENST00000483631 TRACP01848 142 aa10.11□□□□□ -0.79
HPS4-213ENST00000483631 CCKP06307 115 aa10.11□□□□□ -0.79
HPS4-213ENST00000483631 UQCR10Q9UDW1 63 aa10.1□□□□□ -0.79
HPS4-213ENST00000483631 A0A1B0GV72 72 aa10.06□□□□□ -0.8
HPS4-213ENST00000483631 C21orf62-AS1Q17RA5 79 aa10.04□□□□□ -0.8
HPS4-213ENST00000483631 RBM3P98179 157 aaKnown RBP10.03□□□□□ -0.8
HPS4-213ENST00000483631 NOTCH2NLQ7Z3S9 236 aa10.03□□□□□ -0.8
HPS4-213ENST00000483631 C8orf87E5RJ46 101 aa10.02□□□□□ -0.81
HPS4-213ENST00000483631 IGHV6-1A0A0B4J1U7 121 aa10.01□□□□□ -0.81
HPS4-213ENST00000483631 SCGB1C2P0DMR2 95 aa10.01□□□□□ -0.81
HPS4-213ENST00000483631 DEFB116Q30KQ4 102 aa10.01□□□□□ -0.81
HPS4-213ENST00000483631 DSCR8Q96T75 97 aa10.01□□□□□ -0.81
HPS4-213ENST00000483631 KRTAP9-8Q9BYQ0 159 aa10.01□□□□□ -0.81
HPS4-213ENST00000483631 MPLKIPQ8TAP9 179 aa10□□□□□ -0.81
HPS4-213ENST00000483631 KRTAP9-7A8MTY7 169 aa9.99□□□□□ -0.81
HPS4-213ENST00000483631 A0A1B0GVX0 72 aa9.98□□□□□ -0.81
HPS4-213ENST00000483631 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
HPS4-213ENST00000483631 HRES1P13985 223 aa9.97□□□□□ -0.81
HPS4-213ENST00000483631 VPS25Q9BRG1 176 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms