RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TEX49A0A1B0GTD5 131 aa10.47□□□□□ -0.73
CPNE1-224ENST00000483359 IGLV5-48A0A075B6I7 105 aa10.46□□□□□ -0.73
CPNE1-224ENST00000483359 SCGB1C2P0DMR2 95 aa10.46□□□□□ -0.73
CPNE1-224ENST00000483359 SPRR1BP22528 89 aa10.46□□□□□ -0.73
CPNE1-224ENST00000483359 MOBPQ13875 183 aa10.46□□□□□ -0.73
CPNE1-224ENST00000483359 C9orf153Q5TBE3 101 aa10.46□□□□□ -0.74
CPNE1-224ENST00000483359 TAX1BP3O14907 124 aa10.45□□□□□ -0.74
CPNE1-224ENST00000483359 SNCGO76070 127 aa10.45□□□□□ -0.74
CPNE1-224ENST00000483359 Q8N377 158 aa10.45□□□□□ -0.74
CPNE1-224ENST00000483359 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.44□□□□□ -0.74
CPNE1-224ENST00000483359 LAMTOR3Q9UHA4 124 aa10.43□□□□□ -0.74
CPNE1-224ENST00000483359 A0A1B0GV72 72 aa10.43□□□□□ -0.74
CPNE1-224ENST00000483359 GTF2H5Q6ZYL4 71 aa10.41□□□□□ -0.74
CPNE1-224ENST00000483359 SMIM29Q86T20 159 aa10.41□□□□□ -0.74
CPNE1-224ENST00000483359 Q8NBF4 154 aa10.41□□□□□ -0.74
CPNE1-224ENST00000483359 A0A1B0GX51 115 aa10.4□□□□□ -0.74
CPNE1-224ENST00000483359 H3BUT2 72 aa10.39□□□□□ -0.75
CPNE1-224ENST00000483359 DNAL4O96015 105 aa10.39□□□□□ -0.75
CPNE1-224ENST00000483359 LINC00304Q8N9R0 145 aa10.39□□□□□ -0.75
CPNE1-224ENST00000483359 LST1O00453 97 aa10.36□□□□□ -0.75
CPNE1-224ENST00000483359 C9orf118A6NHY6 69 aa10.34□□□□□ -0.75
CPNE1-224ENST00000483359 F8WEM9 126 aa10.34□□□□□ -0.75
CPNE1-224ENST00000483359 TCL1BO95988 128 aa10.34□□□□□ -0.75
CPNE1-224ENST00000483359 SSBP3-AS1Q7Z2R9 100 aa10.34□□□□□ -0.75
CPNE1-224ENST00000483359 FABP2P12104 132 aa10.34□□□□□ -0.75
CPNE1-224ENST00000483359 PPDPFLQ8WWR9 84 aa10.33□□□□□ -0.76
CPNE1-224ENST00000483359 ORMDL1Q9P0S3 153 aa10.33□□□□□ -0.76
CPNE1-224ENST00000483359 A0A0G2JQZ4 141 aa10.32□□□□□ -0.76
CPNE1-224ENST00000483359 TRACP01848 142 aa10.32□□□□□ -0.76
CPNE1-224ENST00000483359 C4orf48Q5BLP8 95 aa10.32□□□□□ -0.76
CPNE1-224ENST00000483359 SIGMAR1Q99720 223 aa10.32□□□□□ -0.76
CPNE1-224ENST00000483359 ATXN8Q156A1 80 aa10.31□□□□□ -0.76
CPNE1-224ENST00000483359 LYRM7Q5U5X0 104 aa10.31□□□□□ -0.76
CPNE1-224ENST00000483359 MTURNQ8N3F0 131 aa10.31□□□□□ -0.76
CPNE1-224ENST00000483359 HRCT1Q6UXD1 115 aa10.3□□□□□ -0.76
CPNE1-224ENST00000483359 A0A1W2PPM0 123 aa10.29□□□□□ -0.76
CPNE1-224ENST00000483359 K7EP34 96 aa10.29□□□□□ -0.76
CPNE1-224ENST00000483359 GHRHP01286 108 aa10.28□□□□□ -0.76
CPNE1-224ENST00000483359 NDUFV3P56181 108 aaKnown RBP10.28□□□□□ -0.76
CPNE1-224ENST00000483359 SPAG11AQ6PDA7 123 aa10.27□□□□□ -0.77
CPNE1-224ENST00000483359 J3QR89 54 aa10.26□□□□□ -0.77
CPNE1-224ENST00000483359 HMCN2Q8NDA2 5059 aa10.25□□□□□ -0.77
CPNE1-224ENST00000483359 TRBV20-1A0A075B6N2 111 aa10.25□□□□□ -0.77
CPNE1-224ENST00000483359 TMEM256-PLSCR3K7ERE1 68 aa10.25□□□□□ -0.77
CPNE1-224ENST00000483359 SPINK1P00995 79 aa10.25□□□□□ -0.77
CPNE1-224ENST00000483359 RETNLBQ9BQ08 111 aa10.25□□□□□ -0.77
CPNE1-224ENST00000483359 H3BMG7 143 aa10.23□□□□□ -0.77
CPNE1-224ENST00000483359 IGFL1Q6UW32 110 aa10.23□□□□□ -0.77
CPNE1-224ENST00000483359 IGLV8-61A0A075B6I0 122 aa10.23□□□□□ -0.77
CPNE1-224ENST00000483359 H3BQ85 93 aa10.21□□□□□ -0.77
CPNE1-224ENST00000483359 BAALC-AS2P0C853 105 aa10.21□□□□□ -0.77
CPNE1-224ENST00000483359 Q6JHZ5 121 aa10.21□□□□□ -0.78
CPNE1-224ENST00000483359 SPCS1Q9Y6A9 102 aa10.21□□□□□ -0.78
CPNE1-224ENST00000483359 C9JAW5 83 aa10.2□□□□□ -0.78
CPNE1-224ENST00000483359 ANKRD29Q8N6D5 301 aa10.18□□□□□ -0.78
CPNE1-224ENST00000483359 PRR4Q16378 134 aa10.17□□□□□ -0.78
CPNE1-224ENST00000483359 RPS29P62273 56 aaKnown RBP10.16□□□□□ -0.78
CPNE1-224ENST00000483359 CD164Q04900 197 aa10.16□□□□□ -0.78
CPNE1-224ENST00000483359 LIMD2Q9BT23 127 aa10.14□□□□□ -0.79
CPNE1-224ENST00000483359 F8W1H4 67 aa10.13□□□□□ -0.79
CPNE1-224ENST00000483359 TRBV7-7A0A0K0K1E9 115 aa10.1□□□□□ -0.79
CPNE1-224ENST00000483359 RBM3P98179 157 aaKnown RBP10.1□□□□□ -0.79
CPNE1-224ENST00000483359 LPAP08519 4548 aa10.09□□□□□ -0.79
CPNE1-224ENST00000483359 TEN1Q86WV5 123 aa10.08□□□□□ -0.8
CPNE1-224ENST00000483359 A0A1W2PNM2 257 aa10.07□□□□□ -0.8
CPNE1-224ENST00000483359 H3BT86 120 aa10.07□□□□□ -0.8
CPNE1-224ENST00000483359 DSCR8Q96T75 97 aa10.07□□□□□ -0.8
CPNE1-224ENST00000483359 TRBV7-4A0A0J9YYF1 115 aa10.06□□□□□ -0.8
CPNE1-224ENST00000483359 CCKP06307 115 aa10.05□□□□□ -0.8
CPNE1-224ENST00000483359 Q6Q795 121 aa10.05□□□□□ -0.8
CPNE1-224ENST00000483359 A0A087WSZ3 146 aa10.05□□□□□ -0.8
CPNE1-224ENST00000483359 JMJD7-PLA2G4BH0Y9G9 81 aa10.05□□□□□ -0.8
CPNE1-224ENST00000483359 IGLV7-46A0A075B6I9 117 aa10.04□□□□□ -0.8
CPNE1-224ENST00000483359 Q5XG85 94 aa10.04□□□□□ -0.8
CPNE1-224ENST00000483359 C14orf132Q9NPU4 83 aa10.03□□□□□ -0.8
CPNE1-224ENST00000483359 LRP2P98164 4655 aa10.03□□□□□ -0.8
CPNE1-224ENST00000483359 SMCPP49901 116 aaPredicted RBP10.02□□□□□ -0.81
CPNE1-224ENST00000483359 FP248Q71RG6 208 aaPredicted RBP10.01□□□□□ -0.81
CPNE1-224ENST00000483359 C1orf195Q5TG92 126 aa10□□□□□ -0.81
CPNE1-224ENST00000483359 PRO0461Q9UI25 63 aa10□□□□□ -0.81
CPNE1-224ENST00000483359 OBSCN-AS1Q96MR7 158 aa9.98□□□□□ -0.81
CPNE1-224ENST00000483359 SS18L2Q9UHA2 77 aa9.98□□□□□ -0.81
CPNE1-224ENST00000483359 Q6ZQT0 140 aa9.97□□□□□ -0.81
CPNE1-224ENST00000483359 ETDBQ3ZM63 59 aa9.97□□□□□ -0.81
CPNE1-224ENST00000483359 LOC110117498A0A087WWA1 95 aa9.96□□□□□ -0.81
CPNE1-224ENST00000483359 UBR4Q5T4S7 5183 aa9.95□□□□□ -0.82
CPNE1-224ENST00000483359 ANAPC13Q9BS18 74 aa9.95□□□□□ -0.82
CPNE1-224ENST00000483359 ASB16-AS1Q495Z4 193 aa9.94□□□□□ -0.82
CPNE1-224ENST00000483359 TPRXLQ17RH7 258 aa9.93□□□□□ -0.82
CPNE1-224ENST00000483359 PDE6GP18545 87 aa9.92□□□□□ -0.82
CPNE1-224ENST00000483359 CDIP1Q9H305 208 aa9.91□□□□□ -0.82
CPNE1-224ENST00000483359 KRTAP13-3Q3SY46 172 aa9.9□□□□□ -0.82
CPNE1-224ENST00000483359 Q96NJ1 140 aa9.88□□□□□ -0.83
CPNE1-224ENST00000483359 C9orf92A6NGG3 77 aa9.88□□□□□ -0.83
CPNE1-224ENST00000483359 MT-ATP8P03928 68 aa9.87□□□□□ -0.83
CPNE1-224ENST00000483359 DEFB116Q30KQ4 102 aa9.87□□□□□ -0.83
CPNE1-224ENST00000483359 IGKV4-1P06312 121 aa9.82□□□□□ -0.84
CPNE1-224ENST00000483359 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
CPNE1-224ENST00000483359 SMIM20Q8N5G0 67 aa9.81□□□□□ -0.84
CPNE1-224ENST00000483359 A0A1B0GW54 56 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms