RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 C7orf33Q8WU49 177 aa5.01□□□□□ -1.61
COL4A5-205ENST00000483338 KRTAP29-1A8MX34 341 aaPredicted RBP5.01□□□□□ -1.61
COL4A5-205ENST00000483338 TNP2Q05952 138 aa5.01□□□□□ -1.61
COL4A5-205ENST00000483338 DEFB135Q30KP9 77 aa5.01□□□□□ -1.61
COL4A5-205ENST00000483338 ASB16-AS1Q495Z4 193 aa5.01□□□□□ -1.61
COL4A5-205ENST00000483338 H0Y9J4 135 aa5□□□□□ -1.61
COL4A5-205ENST00000483338 COL6A5A8TX70 2615 aa5□□□□□ -1.61
COL4A5-205ENST00000483338 C6orf48Q9UBA6 75 aa5□□□□□ -1.61
COL4A5-205ENST00000483338 IGLV1-51P01701 117 aa4.99□□□□□ -1.61
COL4A5-205ENST00000483338 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
COL4A5-205ENST00000483338 C4orf3Q8WVX3 66 aa4.99□□□□□ -1.61
COL4A5-205ENST00000483338 NSD1Q96L73 2696 aaPredicted RBP4.99□□□□□ -1.61
COL4A5-205ENST00000483338 REG3AQ06141 175 aa4.99□□□□□ -1.61
COL4A5-205ENST00000483338 Q6ZR54 194 aa4.99□□□□□ -1.61
COL4A5-205ENST00000483338 MXRA5Q9NR99 2828 aa4.99□□□□□ -1.61
COL4A5-205ENST00000483338 NIPBLQ6KC79 2804 aaeCLIP4.98□□□□□ -1.61
COL4A5-205ENST00000483338 GVQW2A0A096LPI5 108 aaPredicted RBP4.98□□□□□ -1.61
COL4A5-205ENST00000483338 C16orf74Q96GX8 76 aa4.98□□□□□ -1.61
COL4A5-205ENST00000483338 CSNK1G2-AS1Q8NCQ2 148 aa4.97□□□□□ -1.61
COL4A5-205ENST00000483338 IGLV5-37A0A075B6J1 123 aa4.97□□□□□ -1.61
COL4A5-205ENST00000483338 GIG44P09565 113 aaPredicted RBP4.97□□□□□ -1.61
COL4A5-205ENST00000483338 RPL37AP61513 92 aaKnown RBP4.97□□□□□ -1.61
COL4A5-205ENST00000483338 STAB1Q9NY15 2570 aa4.96□□□□□ -1.61
COL4A5-205ENST00000483338 PCOTHQ58A44 107 aa4.96□□□□□ -1.61
COL4A5-205ENST00000483338 A0A087X002 238 aa4.96□□□□□ -1.62
COL4A5-205ENST00000483338 HRES1P13985 223 aa4.96□□□□□ -1.62
COL4A5-205ENST00000483338 A0A0G2JQZ4 141 aa4.95□□□□□ -1.62
COL4A5-205ENST00000483338 A0A1W2PNN7 141 aa4.95□□□□□ -1.62
COL4A5-205ENST00000483338 OXLD1Q5BKU9 147 aa4.95□□□□□ -1.62
COL4A5-205ENST00000483338 MGAM2Q2M2H8 2515 aa4.94□□□□□ -1.62
COL4A5-205ENST00000483338 C1orf134Q5TEV5 83 aa4.94□□□□□ -1.62
COL4A5-205ENST00000483338 NBEAL1Q6ZS30 2694 aa4.93□□□□□ -1.62
COL4A5-205ENST00000483338 KRTAP24-1Q3LI83 254 aa4.92□□□□□ -1.62
COL4A5-205ENST00000483338 PRO0255Q9UI72 69 aa4.92□□□□□ -1.62
COL4A5-205ENST00000483338 CMC4P56277 68 aaPredicted RBP4.92□□□□□ -1.62
COL4A5-205ENST00000483338 NOTCH1P46531 2555 aa4.92□□□□□ -1.62
COL4A5-205ENST00000483338 CAMK2N2Q96S95 79 aa4.91□□□□□ -1.62
COL4A5-205ENST00000483338 Q6ZRX8 168 aa4.89□□□□□ -1.63
COL4A5-205ENST00000483338 DHRS4-AS1Q9P1J3 65 aa4.89□□□□□ -1.63
COL4A5-205ENST00000483338 A0A087WSZ3 146 aa4.89□□□□□ -1.63
COL4A5-205ENST00000483338 SPATA8Q6RVD6 105 aa4.89□□□□□ -1.63
COL4A5-205ENST00000483338 ALMS1Q8TCU4 4167 aa4.88□□□□□ -1.63
COL4A5-205ENST00000483338 IGHV6-1A0A0B4J1U7 121 aa4.88□□□□□ -1.63
COL4A5-205ENST00000483338 ROMO1P60602 79 aa4.88□□□□□ -1.63
COL4A5-205ENST00000483338 TENM2Q9NT68 2774 aa4.88□□□□□ -1.63
COL4A5-205ENST00000483338 IGFL1Q6UW32 110 aa4.87□□□□□ -1.63
COL4A5-205ENST00000483338 EGFEM1PQ0D2K5 195 aa4.87□□□□□ -1.63
COL4A5-205ENST00000483338 KRTAP4-16G5E9R7 235 aaPredicted RBP4.86□□□□□ -1.63
COL4A5-205ENST00000483338 SPART-AS1P0CW21 52 aa4.86□□□□□ -1.63
COL4A5-205ENST00000483338 KRTAP10-3P60369 221 aa4.86□□□□□ -1.63
COL4A5-205ENST00000483338 PRR34Q9NV39 138 aa4.85□□□□□ -1.63
COL4A5-205ENST00000483338 IGKV2-24A0A0C4DH68 120 aa4.85□□□□□ -1.63
COL4A5-205ENST00000483338 RPL37AP8A6NKH3 93 aa4.85□□□□□ -1.63
COL4A5-205ENST00000483338 A8MWP4 228 aa4.84□□□□□ -1.63
COL4A5-205ENST00000483338 CSMD3Q7Z407 3707 aa4.84□□□□□ -1.64
COL4A5-205ENST00000483338 A0A0A0MQY5 61 aa4.84□□□□□ -1.64
COL4A5-205ENST00000483338 MMP24-AS1A0A0U1RRL7 71 aa4.83□□□□□ -1.64
COL4A5-205ENST00000483338 REG3GQ6UW15 175 aa4.83□□□□□ -1.64
COL4A5-205ENST00000483338 ZNF469Q96JG9 3925 aaPredicted RBP4.83□□□□□ -1.64
COL4A5-205ENST00000483338 DEFB131BA0A096LNP1 70 aa4.83□□□□□ -1.64
COL4A5-205ENST00000483338 MIR22HGQ0VDD5 57 aa4.82□□□□□ -1.64
COL4A5-205ENST00000483338 A0A096LNI7 61 aa4.82□□□□□ -1.64
COL4A5-205ENST00000483338 ZNF861PO60384 105 aa4.82□□□□□ -1.64
COL4A5-205ENST00000483338 SPRR1AP35321 89 aa4.81□□□□□ -1.64
COL4A5-205ENST00000483338 LINC00472Q9H8W2 130 aa4.8□□□□□ -1.64
COL4A5-205ENST00000483338 P0C880 135 aa4.8□□□□□ -1.64
COL4A5-205ENST00000483338 C19orf73Q9NVV2 129 aa4.8□□□□□ -1.64
COL4A5-205ENST00000483338 A0A1B0GU69 56 aa4.79□□□□□ -1.64
COL4A5-205ENST00000483338 C15orf56Q8N910 161 aa4.79□□□□□ -1.64
COL4A5-205ENST00000483338 FAM168BA1KXE4 195 aa4.78□□□□□ -1.64
COL4A5-205ENST00000483338 SRRM2Q9UQ35 2752 aaKnown RBP4.78□□□□□ -1.64
COL4A5-205ENST00000483338 TP53AIP1Q9HCN2 124 aa4.78□□□□□ -1.64
COL4A5-205ENST00000483338 IGLV8-61A0A075B6I0 122 aa4.77□□□□□ -1.65
COL4A5-205ENST00000483338 UQCR11O14957 56 aa4.77□□□□□ -1.65
COL4A5-205ENST00000483338 LELP1Q5T871 98 aa4.77□□□□□ -1.65
COL4A5-205ENST00000483338 KRTAP26-1Q6PEX3 210 aa4.77□□□□□ -1.65
COL4A5-205ENST00000483338 X6R8D5 127 aa4.77□□□□□ -1.65
COL4A5-205ENST00000483338 TENM1Q9UKZ4 2725 aa4.77□□□□□ -1.65
COL4A5-205ENST00000483338 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
COL4A5-205ENST00000483338 ANK3Q12955 4377 aaKnown RBP4.76□□□□□ -1.65
COL4A5-205ENST00000483338 KRTAP7-1Q8IUC3 87 aa4.75□□□□□ -1.65
COL4A5-205ENST00000483338 VWFP04275 2813 aa4.74□□□□□ -1.65
COL4A5-205ENST00000483338 ACYP2P14621 99 aa4.73□□□□□ -1.65
COL4A5-205ENST00000483338 UBE2DNLQ8IWF7 75 aa4.73□□□□□ -1.65
COL4A5-205ENST00000483338 FBN1P35555 2871 aaKnown RBP4.72□□□□□ -1.65
COL4A5-205ENST00000483338 PLA2G2DQ9UNK4 145 aa4.72□□□□□ -1.65
COL4A5-205ENST00000483338 K7EIL1 84 aa4.72□□□□□ -1.65
COL4A5-205ENST00000483338 TRRAPQ9Y4A5 3859 aa4.71□□□□□ -1.66
COL4A5-205ENST00000483338 IGLV5-52A0A0A0MRZ9 124 aa4.71□□□□□ -1.66
COL4A5-205ENST00000483338 A8MUU9 505 aa4.7□□□□□ -1.66
COL4A5-205ENST00000483338 DMAC1Q96GE9 116 aa4.7□□□□□ -1.66
COL4A5-205ENST00000483338 C8orf17Q9NRJ1 99 aa4.7□□□□□ -1.66
COL4A5-205ENST00000483338 KRTAP10-11P60412 298 aa4.69□□□□□ -1.66
COL4A5-205ENST00000483338 PRLHP81277 87 aa4.68□□□□□ -1.66
COL4A5-205ENST00000483338 LINC00483Q53H64 154 aa4.68□□□□□ -1.66
COL4A5-205ENST00000483338 Q96NJ1 140 aa4.67□□□□□ -1.66
COL4A5-205ENST00000483338 TLX1NBP0CAT3 122 aa4.67□□□□□ -1.66
COL4A5-205ENST00000483338 DNAH10OSP0CZ25 163 aa4.66□□□□□ -1.66
COL4A5-205ENST00000483338 FLG2Q5D862 2391 aaPredicted RBP4.66□□□□□ -1.66
COL4A5-205ENST00000483338 PKD1L1Q8TDX9 2849 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms