RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 APOC4P55056 127 aa7.52□□□□□ -1.2
VTI1A-205ENST00000483122 MRPL55Q7Z7F7 128 aaKnown RBP7.52□□□□□ -1.2
VTI1A-205ENST00000483122 LIMD2Q9BT23 127 aa7.52□□□□□ -1.2
VTI1A-205ENST00000483122 TENM1Q9UKZ4 2725 aa7.52□□□□□ -1.21
VTI1A-205ENST00000483122 IGKV2D-24A0A075B6R9 120 aa7.52□□□□□ -1.21
VTI1A-205ENST00000483122 SPRR1AP35321 89 aa7.52□□□□□ -1.21
VTI1A-205ENST00000483122 H0Y9P7 68 aa7.51□□□□□ -1.21
VTI1A-205ENST00000483122 SPANXA2-OT1Q8N9U9 137 aa7.51□□□□□ -1.21
VTI1A-205ENST00000483122 COL6A5A8TX70 2615 aa7.51□□□□□ -1.21
VTI1A-205ENST00000483122 VWFP04275 2813 aa7.5□□□□□ -1.21
VTI1A-205ENST00000483122 ANK2Q01484 3957 aa7.5□□□□□ -1.21
VTI1A-205ENST00000483122 KRTAP29-1A8MX34 341 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-205ENST00000483122 IGFL1Q6UW32 110 aa7.5□□□□□ -1.21
VTI1A-205ENST00000483122 KRTAP7-1Q8IUC3 87 aa7.5□□□□□ -1.21
VTI1A-205ENST00000483122 A0A087WSZ3 146 aa7.48□□□□□ -1.21
VTI1A-205ENST00000483122 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
VTI1A-205ENST00000483122 STAB1Q9NY15 2570 aa7.47□□□□□ -1.21
VTI1A-205ENST00000483122 A6NED7 52 aa7.47□□□□□ -1.21
VTI1A-205ENST00000483122 Q75L30 129 aa7.47□□□□□ -1.21
VTI1A-205ENST00000483122 ATP11AUNQ6ZP68 121 aa7.47□□□□□ -1.21
VTI1A-205ENST00000483122 A6NN06 94 aa7.46□□□□□ -1.22
VTI1A-205ENST00000483122 C9orf163Q8N9P6 203 aa7.46□□□□□ -1.22
VTI1A-205ENST00000483122 IGLV5-37A0A075B6J1 123 aa7.46□□□□□ -1.22
VTI1A-205ENST00000483122 CASC2Q6XLA1 102 aa7.45□□□□□ -1.22
VTI1A-205ENST00000483122 COA5Q86WW8 74 aa7.45□□□□□ -1.22
VTI1A-205ENST00000483122 TLX1NBP0CAT3 122 aa7.44□□□□□ -1.22
VTI1A-205ENST00000483122 CNBPP62633 177 aaKnown RBP7.44□□□□□ -1.22
VTI1A-205ENST00000483122 LOC101927531A0A1B0GV80 90 aa7.43□□□□□ -1.22
VTI1A-205ENST00000483122 H3BPC8 53 aa7.43□□□□□ -1.22
VTI1A-205ENST00000483122 NDUFS5O43920 106 aa7.42□□□□□ -1.22
VTI1A-205ENST00000483122 PKD1L1Q8TDX9 2849 aa7.41□□□□□ -1.22
VTI1A-205ENST00000483122 CASC10Q5T4H9 136 aa7.41□□□□□ -1.22
VTI1A-205ENST00000483122 REG3GQ6UW15 175 aa7.41□□□□□ -1.22
VTI1A-205ENST00000483122 PHF5AQ7RTV0 110 aaKnown RBP7.41□□□□□ -1.22
VTI1A-205ENST00000483122 LINC01556Q5JQF7 62 aa7.4□□□□□ -1.23
VTI1A-205ENST00000483122 CDC42SE1Q9NRR8 79 aa7.4□□□□□ -1.23
VTI1A-205ENST00000483122 TRRAPQ9Y4A5 3859 aa7.4□□□□□ -1.23
VTI1A-205ENST00000483122 CMYA5Q8N3K9 4069 aa7.39□□□□□ -1.23
VTI1A-205ENST00000483122 H3BNG1 76 aa7.39□□□□□ -1.23
VTI1A-205ENST00000483122 PRLHP81277 87 aa7.39□□□□□ -1.23
VTI1A-205ENST00000483122 IGLV7-46A0A075B6I9 117 aa7.38□□□□□ -1.23
VTI1A-205ENST00000483122 MOBPQ13875 183 aa7.38□□□□□ -1.23
VTI1A-205ENST00000483122 DNHD1Q96M86 4753 aa7.38□□□□□ -1.23
VTI1A-205ENST00000483122 IGLV8-61A0A075B6I0 122 aa7.37□□□□□ -1.23
VTI1A-205ENST00000483122 PCOTHQ58A44 107 aa7.37□□□□□ -1.23
VTI1A-205ENST00000483122 SPAG11AQ6PDA7 123 aa7.37□□□□□ -1.23
VTI1A-205ENST00000483122 OXLD1Q5BKU9 147 aa7.36□□□□□ -1.23
VTI1A-205ENST00000483122 A8MWP4 228 aa7.36□□□□□ -1.23
VTI1A-205ENST00000483122 C7orf65Q6ZTY9 151 aa7.35□□□□□ -1.23
VTI1A-205ENST00000483122 LINC00472Q9H8W2 130 aa7.35□□□□□ -1.23
VTI1A-205ENST00000483122 PLAC8Q9NZF1 115 aa7.35□□□□□ -1.23
VTI1A-205ENST00000483122 LINC01558Q9Y6Z2 57 aa7.34□□□□□ -1.23
VTI1A-205ENST00000483122 SPINK7P58062 85 aa7.33□□□□□ -1.24
VTI1A-205ENST00000483122 MMP24-AS1A0A0U1RRL7 71 aa7.32□□□□□ -1.24
VTI1A-205ENST00000483122 H0Y9J4 135 aa7.31□□□□□ -1.24
VTI1A-205ENST00000483122 DNAH10OSP0CZ25 163 aa7.31□□□□□ -1.24
VTI1A-205ENST00000483122 KRTAP10-11P60412 298 aa7.31□□□□□ -1.24
VTI1A-205ENST00000483122 DNAH1Q9P2D7 4330 aa7.3□□□□□ -1.24
VTI1A-205ENST00000483122 DNAH3Q8TD57 4116 aa7.28□□□□□ -1.24
VTI1A-205ENST00000483122 DEFB131BA0A096LNP1 70 aa7.28□□□□□ -1.24
VTI1A-205ENST00000483122 C11orf45Q8TAV5 145 aa7.28□□□□□ -1.24
VTI1A-205ENST00000483122 A0A096LNI7 61 aa7.27□□□□□ -1.25
VTI1A-205ENST00000483122 IGKV2-24A0A0C4DH68 120 aa7.26□□□□□ -1.25
VTI1A-205ENST00000483122 HRES1P13985 223 aa7.26□□□□□ -1.25
VTI1A-205ENST00000483122 SRRM2Q9UQ35 2752 aaKnown RBP7.25□□□□□ -1.25
VTI1A-205ENST00000483122 KRTAP11-1Q8IUC1 163 aa7.25□□□□□ -1.25
VTI1A-205ENST00000483122 TENM3Q9P273 2699 aa7.24□□□□□ -1.25
VTI1A-205ENST00000483122 MGAM2Q2M2H8 2515 aa7.24□□□□□ -1.25
VTI1A-205ENST00000483122 TENM2Q9NT68 2774 aa7.24□□□□□ -1.25
VTI1A-205ENST00000483122 K7EIL1 84 aa7.22□□□□□ -1.25
VTI1A-205ENST00000483122 C8orf87E5RJ46 101 aa7.22□□□□□ -1.25
VTI1A-205ENST00000483122 PRAC1Q96KF2 57 aa7.22□□□□□ -1.25
VTI1A-205ENST00000483122 SPRR1BP22528 89 aa7.21□□□□□ -1.25
VTI1A-205ENST00000483122 Q6ZR54 194 aa7.21□□□□□ -1.25
VTI1A-205ENST00000483122 CSMD3Q7Z407 3707 aa7.21□□□□□ -1.26
VTI1A-205ENST00000483122 ASB16-AS1Q495Z4 193 aa7.21□□□□□ -1.26
VTI1A-205ENST00000483122 NBEAL1Q6ZS30 2694 aa7.2□□□□□ -1.26
VTI1A-205ENST00000483122 LINC00313P59037 77 aa7.2□□□□□ -1.26
VTI1A-205ENST00000483122 TP53AIP1Q9HCN2 124 aa7.2□□□□□ -1.26
VTI1A-205ENST00000483122 Q96NJ1 140 aa7.2□□□□□ -1.26
VTI1A-205ENST00000483122 NOTCH1P46531 2555 aa7.2□□□□□ -1.26
VTI1A-205ENST00000483122 DNAH10Q8IVF4 4471 aa7.18□□□□□ -1.26
VTI1A-205ENST00000483122 PRR26Q8N8Z3 221 aa7.18□□□□□ -1.26
VTI1A-205ENST00000483122 C8orf17Q9NRJ1 99 aa7.18□□□□□ -1.26
VTI1A-205ENST00000483122 ADM2Q7Z4H4 148 aa7.17□□□□□ -1.26
VTI1A-205ENST00000483122 CHTF8P0CG12 524 aa7.16□□□□□ -1.26
VTI1A-205ENST00000483122 C4orf48Q5BLP8 95 aa7.15□□□□□ -1.27
VTI1A-205ENST00000483122 IGHV6-1A0A0B4J1U7 121 aa7.14□□□□□ -1.27
VTI1A-205ENST00000483122 ALMS1Q8TCU4 4167 aa7.12□□□□□ -1.27
VTI1A-205ENST00000483122 MEGF8Q7Z7M0 2845 aa7.11□□□□□ -1.27
VTI1A-205ENST00000483122 IGLV9-49A0A0B4J1Y8 123 aa7.11□□□□□ -1.27
VTI1A-205ENST00000483122 A0A087X002 238 aa7.1□□□□□ -1.27
VTI1A-205ENST00000483122 NOTCH2NLQ7Z3S9 236 aa7.1□□□□□ -1.27
VTI1A-205ENST00000483122 MRPL34Q9BQ48 92 aaKnown RBP7.1□□□□□ -1.27
VTI1A-205ENST00000483122 A0A1B0GVX0 72 aa7.1□□□□□ -1.27
VTI1A-205ENST00000483122 LYSTQ99698 3801 aa7.08□□□□□ -1.28
VTI1A-205ENST00000483122 PLA2G1BP04054 148 aaKnown RBP7.08□□□□□ -1.28
VTI1A-205ENST00000483122 KRTAP1-5Q9BYS1 174 aa7.07□□□□□ -1.28
VTI1A-205ENST00000483122 DNAH9Q9NYC9 4486 aa7.07□□□□□ -1.28
VTI1A-205ENST00000483122 PRKDCP78527 4128 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms