RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 CD164Q04900 197 aa9.21□□□□□ -0.94
VAMP4-204ENST00000482519 HIGD1BQ9P298 99 aa9.21□□□□□ -0.94
VAMP4-204ENST00000482519 F8WEM9 126 aa9.2□□□□□ -0.94
VAMP4-204ENST00000482519 CFC1BP0CG36 223 aa9.2□□□□□ -0.94
VAMP4-204ENST00000482519 CFC1P0CG37 223 aa9.2□□□□□ -0.94
VAMP4-204ENST00000482519 BVES-AS1Q5T3Y7 98 aa9.2□□□□□ -0.94
VAMP4-204ENST00000482519 C2orf91Q6ZV80 131 aa9.19□□□□□ -0.94
VAMP4-204ENST00000482519 TMA7Q9Y2S6 64 aaKnown RBP9.17□□□□□ -0.94
VAMP4-204ENST00000482519 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.15□□□□□ -0.94
VAMP4-204ENST00000482519 A0A0B4J2C4 111 aa9.14□□□□□ -0.95
VAMP4-204ENST00000482519 SEC61BP60468 96 aaKnown RBP9.14□□□□□ -0.95
VAMP4-204ENST00000482519 ASB16-AS1Q495Z4 193 aa9.14□□□□□ -0.95
VAMP4-204ENST00000482519 CEND1Q8N111 149 aa9.14□□□□□ -0.95
VAMP4-204ENST00000482519 C9orf92A6NGG3 77 aa9.13□□□□□ -0.95
VAMP4-204ENST00000482519 XP32Q5T750 250 aa9.13□□□□□ -0.95
VAMP4-204ENST00000482519 PYY3Q5JQD4 70 aa9.12□□□□□ -0.95
VAMP4-204ENST00000482519 SNHG12Q9BXW3 62 aa9.12□□□□□ -0.95
VAMP4-204ENST00000482519 TMEM238LA0A1B0GVL6 79 aa9.11□□□□□ -0.95
VAMP4-204ENST00000482519 A6NJY4 79 aa9.11□□□□□ -0.95
VAMP4-204ENST00000482519 SNCGO76070 127 aa9.11□□□□□ -0.95
VAMP4-204ENST00000482519 OCIAD2Q56VL3 154 aa9.11□□□□□ -0.95
VAMP4-204ENST00000482519 Q5XG85 94 aa9.11□□□□□ -0.95
VAMP4-204ENST00000482519 C1orf195Q5TG92 126 aa9.1□□□□□ -0.95
VAMP4-204ENST00000482519 Q6JHZ5 121 aa9.1□□□□□ -0.95
VAMP4-204ENST00000482519 PRO1854Q9UHT4 67 aa9.1□□□□□ -0.95
VAMP4-204ENST00000482519 H0YGX0 51 aa9.09□□□□□ -0.95
VAMP4-204ENST00000482519 TCL1BO95988 128 aa9.09□□□□□ -0.95
VAMP4-204ENST00000482519 FXYD2P54710 66 aa9.09□□□□□ -0.95
VAMP4-204ENST00000482519 IGFL1Q6UW32 110 aa9.09□□□□□ -0.95
VAMP4-204ENST00000482519 FAT4Q6V0I7 4981 aa9.09□□□□□ -0.96
VAMP4-204ENST00000482519 PPDPFLQ8WWR9 84 aa9.08□□□□□ -0.96
VAMP4-204ENST00000482519 CLEC2BQ92478 149 aa9.08□□□□□ -0.96
VAMP4-204ENST00000482519 FAM218AQ96MZ4 157 aa9.08□□□□□ -0.96
VAMP4-204ENST00000482519 IGLV8-61A0A075B6I0 122 aa9.07□□□□□ -0.96
VAMP4-204ENST00000482519 H3BUT2 72 aa9.07□□□□□ -0.96
VAMP4-204ENST00000482519 LORP23490 312 aaPredicted RBP9.06□□□□□ -0.96
VAMP4-204ENST00000482519 HSD52Q0P140 79 aa9.04□□□□□ -0.96
VAMP4-204ENST00000482519 KRTAP4-1Q9BYQ7 146 aa9.04□□□□□ -0.96
VAMP4-204ENST00000482519 TRBV7-7A0A0K0K1E9 115 aa9.03□□□□□ -0.96
VAMP4-204ENST00000482519 K7ERJ3 54 aa9.02□□□□□ -0.97
VAMP4-204ENST00000482519 KRTAP9-2Q9BYQ4 174 aa9.02□□□□□ -0.97
VAMP4-204ENST00000482519 TRIAP1O43715 76 aa9.01□□□□□ -0.97
VAMP4-204ENST00000482519 PSMB2P49721 201 aa9.01□□□□□ -0.97
VAMP4-204ENST00000482519 FABP2P12104 132 aa9□□□□□ -0.97
VAMP4-204ENST00000482519 NDUFV3P56181 108 aaKnown RBP9□□□□□ -0.97
VAMP4-204ENST00000482519 UQCR10Q9UDW1 63 aa9□□□□□ -0.97
VAMP4-204ENST00000482519 PCOTHQ58A44 107 aa8.99□□□□□ -0.97
VAMP4-204ENST00000482519 A0A1B0GX51 115 aa8.97□□□□□ -0.97
VAMP4-204ENST00000482519 GHRHP01286 108 aa8.97□□□□□ -0.97
VAMP4-204ENST00000482519 KRTAP9-6A0A140TA67 174 aa8.96□□□□□ -0.98
VAMP4-204ENST00000482519 H3BMG7 143 aa8.96□□□□□ -0.98
VAMP4-204ENST00000482519 DNAL4O96015 105 aa8.94□□□□□ -0.98
VAMP4-204ENST00000482519 COX6CP09669 75 aa8.94□□□□□ -0.98
VAMP4-204ENST00000482519 LST1O00453 97 aa8.93□□□□□ -0.98
VAMP4-204ENST00000482519 TEN1Q86WV5 123 aa8.92□□□□□ -0.98
VAMP4-204ENST00000482519 A0A1B0GV72 72 aa8.91□□□□□ -0.98
VAMP4-204ENST00000482519 ORMDL1Q9P0S3 153 aa8.91□□□□□ -0.98
VAMP4-204ENST00000482519 SS18L2Q9UHA2 77 aa8.9□□□□□ -0.98
VAMP4-204ENST00000482519 RPL37P61927 97 aaKnown RBP8.89□□□□□ -0.99
VAMP4-204ENST00000482519 Q6Q795 121 aa8.89□□□□□ -0.99
VAMP4-204ENST00000482519 A0A087WSZ3 146 aa8.88□□□□□ -0.99
VAMP4-204ENST00000482519 SCGB1C2P0DMR2 95 aa8.88□□□□□ -0.99
VAMP4-204ENST00000482519 OBSCN-AS1Q96MR7 158 aa8.88□□□□□ -0.99
VAMP4-204ENST00000482519 ANKRD29Q8N6D5 301 aa8.85□□□□□ -0.99
VAMP4-204ENST00000482519 A0A1W2PNM2 257 aa8.84□□□□□ -0.99
VAMP4-204ENST00000482519 H3BQ85 93 aa8.84□□□□□ -0.99
VAMP4-204ENST00000482519 TMEM256-PLSCR3K7ERE1 68 aa8.84□□□□□ -0.99
VAMP4-204ENST00000482519 Q96NJ1 140 aa8.81□□□□□ -1
VAMP4-204ENST00000482519 TRACP01848 142 aa8.8□□□□□ -1
VAMP4-204ENST00000482519 M0R143 59 aa8.78□□□□□ -1
VAMP4-204ENST00000482519 ATP11AUNQ6ZP68 121 aa8.78□□□□□ -1
VAMP4-204ENST00000482519 TRBV7-4A0A0J9YYF1 115 aa8.77□□□□□ -1.01
VAMP4-204ENST00000482519 UBE2V1Q13404 147 aa8.77□□□□□ -1.01
VAMP4-204ENST00000482519 SIGMAR1Q99720 223 aa8.77□□□□□ -1.01
VAMP4-204ENST00000482519 CCKP06307 115 aa8.76□□□□□ -1.01
VAMP4-204ENST00000482519 SMIM6P0DI80 62 aa8.76□□□□□ -1.01
VAMP4-204ENST00000482519 Q75L30 129 aa8.76□□□□□ -1.01
VAMP4-204ENST00000482519 KRTAP19-2Q3LHN2 52 aa8.75□□□□□ -1.01
VAMP4-204ENST00000482519 NAA38Q9BRA0 125 aaKnown RBP8.75□□□□□ -1.01
VAMP4-204ENST00000482519 VPS25Q9BRG1 176 aa8.75□□□□□ -1.01
VAMP4-204ENST00000482519 IGKV4-1P06312 121 aa8.73□□□□□ -1.01
VAMP4-204ENST00000482519 BAALC-AS2P0C853 105 aa8.73□□□□□ -1.01
VAMP4-204ENST00000482519 DSCR10P59022 87 aa8.73□□□□□ -1.01
VAMP4-204ENST00000482519 RBM3P98179 157 aaKnown RBP8.72□□□□□ -1.01
VAMP4-204ENST00000482519 DEFB116Q30KQ4 102 aa8.72□□□□□ -1.01
VAMP4-204ENST00000482519 DSCR8Q96T75 97 aa8.71□□□□□ -1.02
VAMP4-204ENST00000482519 COX6B2Q6YFQ2 88 aa8.7□□□□□ -1.02
VAMP4-204ENST00000482519 ATXN8Q156A1 80 aa8.69□□□□□ -1.02
VAMP4-204ENST00000482519 TSTD3H0UI37 97 aa8.68□□□□□ -1.02
VAMP4-204ENST00000482519 BATFQ16520 125 aa8.68□□□□□ -1.02
VAMP4-204ENST00000482519 LINC00313P59037 77 aa8.67□□□□□ -1.02
VAMP4-204ENST00000482519 MT1HP80294 61 aa8.67□□□□□ -1.02
VAMP4-204ENST00000482519 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
VAMP4-204ENST00000482519 C9JAW5 83 aa8.66□□□□□ -1.02
VAMP4-204ENST00000482519 LINC00472Q9H8W2 130 aa8.66□□□□□ -1.02
VAMP4-204ENST00000482519 A8MUU9 505 aa8.65□□□□□ -1.02
VAMP4-204ENST00000482519 IGHV6-1A0A0B4J1U7 121 aa8.63□□□□□ -1.03
VAMP4-204ENST00000482519 LOC105371267A0A1B0GV96 52 aa8.61□□□□□ -1.03
VAMP4-204ENST00000482519 M0R2T5 61 aa8.61□□□□□ -1.03
VAMP4-204ENST00000482519 NOTCH2NLQ7Z3S9 236 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms