RNA–Protein interactions for RNA: ENST00000482499.1

CMC1-210, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 446 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-210ENST00000482499 SPRR2FQ96RM1 72 aa-0.93□□□□□ -2.56
CMC1-210ENST00000482499 TIAM2Q8IVF5 1701 aa-0.93□□□□□ -2.56
CMC1-210ENST00000482499 DNAH6Q9C0G6 4158 aa-0.93□□□□□ -2.56
CMC1-210ENST00000482499 HTTP42858 3142 aa-0.94□□□□□ -2.56
CMC1-210ENST00000482499 DEFA5Q01523 94 aa-0.94□□□□□ -2.56
CMC1-210ENST00000482499 RYR2Q92736 4967 aa-0.94□□□□□ -2.56
CMC1-210ENST00000482499 DOT1LQ8TEK3 1739 aa-0.95□□□□□ -2.56
CMC1-210ENST00000482499 LCE6AA0A183 80 aa-0.95□□□□□ -2.56
CMC1-210ENST00000482499 ATP5EP2Q5VTU8 51 aa-0.95□□□□□ -2.56
CMC1-210ENST00000482499 DNAH9Q9NYC9 4486 aa-0.95□□□□□ -2.56
CMC1-210ENST00000482499 USP9YO00507 2555 aaPredicted RBP-0.96□□□□□ -2.56
CMC1-210ENST00000482499 NESP48681 1621 aa-0.96□□□□□ -2.56
CMC1-210ENST00000482499 MAP3K4Q9Y6R4 1608 aa-0.96□□□□□ -2.56
CMC1-210ENST00000482499 NDUFA4O00483 81 aa-0.96□□□□□ -2.56
CMC1-210ENST00000482499 PLXNC1O60486 1568 aa-0.96□□□□□ -2.56
CMC1-210ENST00000482499 DSPP15924 2871 aaKnown RBP-0.97□□□□□ -2.56
CMC1-210ENST00000482499 FAT3Q8TDW7 4589 aa-0.97□□□□□ -2.56
CMC1-210ENST00000482499 DMXL1Q9Y485 3027 aa-0.97□□□□□ -2.56
CMC1-210ENST00000482499 A0A087WXM4 84 aa-0.97□□□□□ -2.56
CMC1-210ENST00000482499 H0YAA0 97 aa-0.97□□□□□ -2.56
CMC1-210ENST00000482499 ADIRFQ15847 76 aa-0.97□□□□□ -2.56
CMC1-210ENST00000482499 ST20Q9HBF5 79 aa-0.97□□□□□ -2.56
CMC1-210ENST00000482499 ZNF831Q5JPB2 1677 aa-0.97□□□□□ -2.57
CMC1-210ENST00000482499 FASNP49327 2511 aaKnown RBP-0.97□□□□□ -2.57
CMC1-210ENST00000482499 MAGI3Q5TCQ9 1506 aa-0.98□□□□□ -2.57
CMC1-210ENST00000482499 NREPQ16612 68 aa-0.98□□□□□ -2.57
CMC1-210ENST00000482499 RNF213Q63HN8 5207 aa-0.99□□□□□ -2.57
CMC1-210ENST00000482499 WIZO95785 1651 aa-0.99□□□□□ -2.57
CMC1-210ENST00000482499 ZZEF1O43149 2961 aa-0.99□□□□□ -2.57
CMC1-210ENST00000482499 S100A13Q99584 98 aa-0.99□□□□□ -2.57
CMC1-210ENST00000482499 MUC17Q685J3 4493 aa-0.99□□□□□ -2.57
CMC1-210ENST00000482499 CCDC88BA6NC98 1476 aa-0.99□□□□□ -2.57
CMC1-210ENST00000482499 DIP2BQ9P265 1576 aa-1□□□□□ -2.57
CMC1-210ENST00000482499 AKAP9Q99996 3911 aa-1□□□□□ -2.57
CMC1-210ENST00000482499 LYNX1G3V0Z9 82 aa-1□□□□□ -2.57
CMC1-210ENST00000482499 ITPR3Q14573 2671 aa-1□□□□□ -2.57
CMC1-210ENST00000482499 ANKRD50Q9ULJ7 1429 aa-1□□□□□ -2.57
CMC1-210ENST00000482499 CUBNO60494 3623 aa-1□□□□□ -2.57
CMC1-210ENST00000482499 PPLO60437 1756 aa-1.01□□□□□ -2.57
CMC1-210ENST00000482499 ANKRD11Q6UB99 2663 aaPredicted RBP-1.01□□□□□ -2.57
CMC1-210ENST00000482499 SMIM13P0DJ93 91 aa-1.01□□□□□ -2.57
CMC1-210ENST00000482499 PRLHP81277 87 aa-1.01□□□□□ -2.57
CMC1-210ENST00000482499 DEFB121Q5J5C9 76 aa-1.01□□□□□ -2.57
CMC1-210ENST00000482499 LAMA2P24043 3122 aaKnown RBP-1.01□□□□□ -2.57
CMC1-210ENST00000482499 PIK3C2BO00750 1634 aa-1.01□□□□□ -2.57
CMC1-210ENST00000482499 DEPDC5O75140 1603 aa-1.02□□□□□ -2.57
CMC1-210ENST00000482499 DEFB130BP0DP73 79 aa-1.02□□□□□ -2.57
CMC1-210ENST00000482499 DEFB130AP0DP74 79 aa-1.02□□□□□ -2.57
CMC1-210ENST00000482499 TEP1Q99973 2627 aaKnown RBP-1.03□□□□□ -2.57
CMC1-210ENST00000482499 HMGA1P17096 107 aaKnown RBP-1.03□□□□□ -2.57
CMC1-210ENST00000482499 SCN11AQ9UI33 1791 aa-1.03□□□□□ -2.58
CMC1-210ENST00000482499 ARFGEF2Q9Y6D5 1785 aa-1.03□□□□□ -2.58
CMC1-210ENST00000482499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.04□□□□□ -2.58
CMC1-210ENST00000482499 H3BUT2 72 aa-1.04□□□□□ -2.58
CMC1-210ENST00000482499 IAPPP10997 89 aa-1.04□□□□□ -2.58
CMC1-210ENST00000482499 PKHD1L1Q86WI1 4243 aa-1.06□□□□□ -2.58
CMC1-210ENST00000482499 VPS13DQ5THJ4 4388 aa-1.07□□□□□ -2.58
CMC1-210ENST00000482499 PLECQ15149 4684 aaKnown RBP-1.07□□□□□ -2.58
CMC1-210ENST00000482499 DNAH3Q8TD57 4116 aa-1.08□□□□□ -2.58
CMC1-210ENST00000482499 DEFB131BA0A096LNP1 70 aa-1.08□□□□□ -2.58
CMC1-210ENST00000482499 DNAH2Q9P225 4427 aa-1.08□□□□□ -2.58
CMC1-210ENST00000482499 GCN1Q92616 2671 aaKnown RBP-1.08□□□□□ -2.58
CMC1-210ENST00000482499 DNHD1Q96M86 4753 aa-1.08□□□□□ -2.58
CMC1-210ENST00000482499 KALRNO60229 2985 aa-1.08□□□□□ -2.58
CMC1-210ENST00000482499 MYO18BQ8IUG5 2567 aa-1.08□□□□□ -2.58
CMC1-210ENST00000482499 MTORP42345 2549 aa-1.09□□□□□ -2.58
CMC1-210ENST00000482499 MRPL33O75394 65 aaKnown RBP-1.09□□□□□ -2.58
CMC1-210ENST00000482499 S4R3F8 94 aa-1.09□□□□□ -2.58
CMC1-210ENST00000482499 LAMA1P25391 3075 aa-1.09□□□□□ -2.58
CMC1-210ENST00000482499 MAP3K1Q13233 1512 aa-1.1□□□□□ -2.59
CMC1-210ENST00000482499 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.11□□□□□ -2.59
CMC1-210ENST00000482499 UTP20O75691 2785 aaKnown RBP-1.11□□□□□ -2.59
CMC1-210ENST00000482499 BVES-AS1Q5T3Y7 98 aa-1.11□□□□□ -2.59
CMC1-210ENST00000482499 VPS13BQ7Z7G8 4022 aa-1.11□□□□□ -2.59
CMC1-210ENST00000482499 ANK3Q12955 4377 aaKnown RBP-1.12□□□□□ -2.59
CMC1-210ENST00000482499 MED14O60244 1454 aa-1.12□□□□□ -2.59
CMC1-210ENST00000482499 DEFB106AQ8N104 65 aa-1.13□□□□□ -2.59
CMC1-210ENST00000482499 ABCC1P33527 1531 aa-1.14□□□□□ -2.59
CMC1-210ENST00000482499 KDM5DQ9BY66 1539 aa-1.14□□□□□ -2.59
CMC1-210ENST00000482499 DDX60LQ5H9U9 1706 aaKnown RBP-1.14□□□□□ -2.59
CMC1-210ENST00000482499 APOBP04114 4563 aaKnown RBP-1.14□□□□□ -2.59
CMC1-210ENST00000482499 NBEAQ8NFP9 2946 aa-1.15□□□□□ -2.59
CMC1-210ENST00000482499 PLCH1Q4KWH8 1693 aa-1.15□□□□□ -2.59
CMC1-210ENST00000482499 SMARCA2P51531 1590 aa-1.15□□□□□ -2.59
CMC1-210ENST00000482499 RB1CC1Q8TDY2 1594 aa-1.15□□□□□ -2.59
CMC1-210ENST00000482499 CCDC18Q5T9S5 1454 aa-1.15□□□□□ -2.59
CMC1-210ENST00000482499 UBL5Q9BZL1 73 aa-1.15□□□□□ -2.59
CMC1-210ENST00000482499 DCAF1Q9Y4B6 1507 aa-1.15□□□□□ -2.59
CMC1-210ENST00000482499 ERVK-7P63135 1459 aa-1.16□□□□□ -2.59
CMC1-210ENST00000482499 USP9XQ93008 2570 aaPredicted RBP-1.16□□□□□ -2.59
CMC1-210ENST00000482499 NIPBLQ6KC79 2804 aaeCLIP-1.16□□□□□ -2.6
CMC1-210ENST00000482499 LRRK2Q5S007 2527 aa-1.17□□□□□ -2.6
CMC1-210ENST00000482499 PKD1L2Q7Z442 2459 aa-1.17□□□□□ -2.6
CMC1-210ENST00000482499 C18orf32Q8TCD1 76 aa-1.17□□□□□ -2.6
CMC1-210ENST00000482499 KCNQ1DNQ9H478 68 aa-1.17□□□□□ -2.6
CMC1-210ENST00000482499 HFM1A2PYH4 1435 aa-1.17□□□□□ -2.6
CMC1-210ENST00000482499 CRIP1P50238 77 aa-1.18□□□□□ -2.6
CMC1-210ENST00000482499 DEFB110Q30KQ9 67 aa-1.18□□□□□ -2.6
CMC1-210ENST00000482499 MGAM2Q2M2H8 2515 aa-1.18□□□□□ -2.6
CMC1-210ENST00000482499 RALGAPBQ86X10 1494 aa-1.18□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms