RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.91□□□□□ -0.66
MSH5-215ENST00000482280 C14orf144Q96I85 54 aa10.9□□□□□ -0.66
MSH5-215ENST00000482280 PAM16Q9Y3D7 125 aa10.9□□□□□ -0.66
MSH5-215ENST00000482280 MUC17Q685J3 4493 aa10.9□□□□□ -0.67
MSH5-215ENST00000482280 SPATA45Q537H7 98 aa10.89□□□□□ -0.67
MSH5-215ENST00000482280 C1orf195Q5TG92 126 aa10.89□□□□□ -0.67
MSH5-215ENST00000482280 VAMP8Q9BV40 100 aa10.89□□□□□ -0.67
MSH5-215ENST00000482280 SNHG12Q9BXW3 62 aa10.89□□□□□ -0.67
MSH5-215ENST00000482280 PPDPFLQ8WWR9 84 aa10.88□□□□□ -0.67
MSH5-215ENST00000482280 CLEC2BQ92478 149 aa10.87□□□□□ -0.67
MSH5-215ENST00000482280 OCIAD2Q56VL3 154 aa10.86□□□□□ -0.67
MSH5-215ENST00000482280 HIGD1BQ9P298 99 aa10.85□□□□□ -0.67
MSH5-215ENST00000482280 PCOTHQ58A44 107 aa10.84□□□□□ -0.67
MSH5-215ENST00000482280 CFC1BP0CG36 223 aa10.83□□□□□ -0.68
MSH5-215ENST00000482280 CFC1P0CG37 223 aa10.83□□□□□ -0.68
MSH5-215ENST00000482280 KRTAP4-1Q9BYQ7 146 aa10.83□□□□□ -0.68
MSH5-215ENST00000482280 IGLV8-61A0A075B6I0 122 aa10.82□□□□□ -0.68
MSH5-215ENST00000482280 TMEM238LA0A1B0GVL6 79 aa10.82□□□□□ -0.68
MSH5-215ENST00000482280 A6NJY4 79 aa10.82□□□□□ -0.68
MSH5-215ENST00000482280 H0YGX0 51 aa10.82□□□□□ -0.68
MSH5-215ENST00000482280 IGFL1Q6UW32 110 aa10.82□□□□□ -0.68
MSH5-215ENST00000482280 A0A0B4J2C4 111 aa10.81□□□□□ -0.68
MSH5-215ENST00000482280 FAT4Q6V0I7 4981 aa10.81□□□□□ -0.68
MSH5-215ENST00000482280 TRBV7-7A0A0K0K1E9 115 aa10.8□□□□□ -0.68
MSH5-215ENST00000482280 GHRHP01286 108 aa10.8□□□□□ -0.68
MSH5-215ENST00000482280 CEND1Q8N111 149 aa10.76□□□□□ -0.69
MSH5-215ENST00000482280 H3BUT2 72 aa10.75□□□□□ -0.69
MSH5-215ENST00000482280 PRO1854Q9UHT4 67 aa10.75□□□□□ -0.69
MSH5-215ENST00000482280 C2orf91Q6ZV80 131 aa10.74□□□□□ -0.69
MSH5-215ENST00000482280 KRTAP9-2Q9BYQ4 174 aa10.74□□□□□ -0.69
MSH5-215ENST00000482280 LST1O00453 97 aa10.72□□□□□ -0.69
MSH5-215ENST00000482280 RPL37P61927 97 aaKnown RBP10.72□□□□□ -0.69
MSH5-215ENST00000482280 SS18L2Q9UHA2 77 aa10.72□□□□□ -0.69
MSH5-215ENST00000482280 A0A1B0GX51 115 aa10.7□□□□□ -0.7
MSH5-215ENST00000482280 NDUFV3P56181 108 aaKnown RBP10.7□□□□□ -0.7
MSH5-215ENST00000482280 FABP2P12104 132 aa10.69□□□□□ -0.7
MSH5-215ENST00000482280 FAM218AQ96MZ4 157 aa10.68□□□□□ -0.7
MSH5-215ENST00000482280 DNAL4O96015 105 aa10.66□□□□□ -0.7
MSH5-215ENST00000482280 TEN1Q86WV5 123 aa10.66□□□□□ -0.7
MSH5-215ENST00000482280 H3BMG7 143 aa10.65□□□□□ -0.7
MSH5-215ENST00000482280 PSMB2P49721 201 aa10.65□□□□□ -0.7
MSH5-215ENST00000482280 FXYD2P54710 66 aa10.65□□□□□ -0.7
MSH5-215ENST00000482280 HSD52Q0P140 79 aa10.64□□□□□ -0.71
MSH5-215ENST00000482280 Q6Q795 121 aa10.64□□□□□ -0.71
MSH5-215ENST00000482280 OBSCN-AS1Q96MR7 158 aa10.64□□□□□ -0.71
MSH5-215ENST00000482280 COX6CP09669 75 aa10.63□□□□□ -0.71
MSH5-215ENST00000482280 TRIAP1O43715 76 aa10.62□□□□□ -0.71
MSH5-215ENST00000482280 ATP11AUNQ6ZP68 121 aa10.62□□□□□ -0.71
MSH5-215ENST00000482280 H3BQ85 93 aa10.6□□□□□ -0.71
MSH5-215ENST00000482280 PYY3Q5JQD4 70 aa10.6□□□□□ -0.71
MSH5-215ENST00000482280 A0A087WSZ3 146 aa10.59□□□□□ -0.71
MSH5-215ENST00000482280 COX6B2Q6YFQ2 88 aa10.59□□□□□ -0.71
MSH5-215ENST00000482280 ORMDL1Q9P0S3 153 aa10.58□□□□□ -0.72
MSH5-215ENST00000482280 TMA7Q9Y2S6 64 aaKnown RBP10.57□□□□□ -0.72
MSH5-215ENST00000482280 Q96NJ1 140 aa10.56□□□□□ -0.72
MSH5-215ENST00000482280 UQCR10Q9UDW1 63 aa10.56□□□□□ -0.72
MSH5-215ENST00000482280 LCE2CQ5TA81 110 aa10.55□□□□□ -0.72
MSH5-215ENST00000482280 Q75L30 129 aa10.55□□□□□ -0.72
MSH5-215ENST00000482280 K7ERJ3 54 aa10.54□□□□□ -0.72
MSH5-215ENST00000482280 ANKRD29Q8N6D5 301 aa10.54□□□□□ -0.72
MSH5-215ENST00000482280 TMEM256-PLSCR3K7ERE1 68 aa10.53□□□□□ -0.72
MSH5-215ENST00000482280 KRTAP19-2Q3LHN2 52 aa10.51□□□□□ -0.73
MSH5-215ENST00000482280 A0A1B0GV72 72 aa10.5□□□□□ -0.73
MSH5-215ENST00000482280 M0R2T5 61 aa10.5□□□□□ -0.73
MSH5-215ENST00000482280 MT1HP80294 61 aa10.5□□□□□ -0.73
MSH5-215ENST00000482280 SIGMAR1Q99720 223 aa10.5□□□□□ -0.73
MSH5-215ENST00000482280 SCGB1C2P0DMR2 95 aa10.49□□□□□ -0.73
MSH5-215ENST00000482280 TRBV7-4A0A0J9YYF1 115 aa10.46□□□□□ -0.73
MSH5-215ENST00000482280 A0A1W2PNM2 257 aa10.46□□□□□ -0.73
MSH5-215ENST00000482280 TRACP01848 142 aa10.44□□□□□ -0.74
MSH5-215ENST00000482280 CCKP06307 115 aa10.42□□□□□ -0.74
MSH5-215ENST00000482280 IGKV4-1P06312 121 aa10.42□□□□□ -0.74
MSH5-215ENST00000482280 UBE2V1Q13404 147 aa10.42□□□□□ -0.74
MSH5-215ENST00000482280 C20orf166-AS1Q96NR2 134 aa10.41□□□□□ -0.74
MSH5-215ENST00000482280 KRTAP9-6A0A140TA67 174 aa10.4□□□□□ -0.74
MSH5-215ENST00000482280 DSCR10P59022 87 aa10.4□□□□□ -0.74
MSH5-215ENST00000482280 LCE2DQ5TA82 110 aaPredicted RBP10.4□□□□□ -0.74
MSH5-215ENST00000482280 LINC00313P59037 77 aa10.39□□□□□ -0.75
MSH5-215ENST00000482280 VPS25Q9BRG1 176 aa10.39□□□□□ -0.75
MSH5-215ENST00000482280 A8MUU9 505 aa10.38□□□□□ -0.75
MSH5-215ENST00000482280 DSCR8Q96T75 97 aa10.38□□□□□ -0.75
MSH5-215ENST00000482280 TRBV20-1A0A075B6N2 111 aa10.37□□□□□ -0.75
MSH5-215ENST00000482280 RBM3P98179 157 aaKnown RBP10.36□□□□□ -0.75
MSH5-215ENST00000482280 M0R143 59 aa10.34□□□□□ -0.75
MSH5-215ENST00000482280 DEFB116Q30KQ4 102 aa10.32□□□□□ -0.76
MSH5-215ENST00000482280 KRTAP10-6P60371 365 aaPredicted RBP10.31□□□□□ -0.76
MSH5-215ENST00000482280 C21orf62-AS1Q17RA5 79 aa10.31□□□□□ -0.76
MSH5-215ENST00000482280 BAALC-AS2P0C853 105 aa10.3□□□□□ -0.76
MSH5-215ENST00000482280 IGHV6-1A0A0B4J1U7 121 aa10.29□□□□□ -0.76
MSH5-215ENST00000482280 C9JAW5 83 aa10.29□□□□□ -0.76
MSH5-215ENST00000482280 LINC00472Q9H8W2 130 aa10.29□□□□□ -0.76
MSH5-215ENST00000482280 LORP23490 312 aaPredicted RBP10.28□□□□□ -0.76
MSH5-215ENST00000482280 ATXN8Q156A1 80 aa10.26□□□□□ -0.77
MSH5-215ENST00000482280 C8orf87E5RJ46 101 aa10.23□□□□□ -0.77
MSH5-215ENST00000482280 J3KT08 172 aa10.23□□□□□ -0.77
MSH5-215ENST00000482280 JMJD7-PLA2G4BH0Y9G9 81 aa10.21□□□□□ -0.77
MSH5-215ENST00000482280 LYRM7Q5U5X0 104 aa10.21□□□□□ -0.77
MSH5-215ENST00000482280 FAM236DA0A1B0GTK5 79 aa10.2□□□□□ -0.78
MSH5-215ENST00000482280 A0A1B0GVX0 72 aa10.2□□□□□ -0.78
MSH5-215ENST00000482280 KRTAP16-1A8MUX0 517 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms