RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 PPDPFLQ8WWR9 84 aa13.72□□□□□ -0.21
SHISA4-203ENST00000481699 ORMDL1Q9P0S3 153 aa13.72□□□□□ -0.21
SHISA4-203ENST00000481699 LINC01547P58512 204 aaPredicted RBP13.71□□□□□ -0.21
SHISA4-203ENST00000481699 Q8N377 158 aa13.71□□□□□ -0.21
SHISA4-203ENST00000481699 IGLV9-49A0A0B4J1Y8 123 aa13.7□□□□□ -0.22
SHISA4-203ENST00000481699 H3BQ85 93 aa13.7□□□□□ -0.22
SHISA4-203ENST00000481699 A0A087X002 238 aa13.69□□□□□ -0.22
SHISA4-203ENST00000481699 KRTAP29-1A8MX34 341 aaPredicted RBP13.68□□□□□ -0.22
SHISA4-203ENST00000481699 F8WEM9 126 aa13.68□□□□□ -0.22
SHISA4-203ENST00000481699 C9orf153Q5TBE3 101 aa13.68□□□□□ -0.22
SHISA4-203ENST00000481699 TYMSOSQ8TAI1 123 aa13.68□□□□□ -0.22
SHISA4-203ENST00000481699 SPCS1Q9Y6A9 102 aa13.67□□□□□ -0.22
SHISA4-203ENST00000481699 J3QL48 77 aa13.65□□□□□ -0.22
SHISA4-203ENST00000481699 C3orf22Q8N5N4 141 aa13.65□□□□□ -0.22
SHISA4-203ENST00000481699 MOBPQ13875 183 aa13.64□□□□□ -0.23
SHISA4-203ENST00000481699 TMEM256-PLSCR3K7ERE1 68 aa13.63□□□□□ -0.23
SHISA4-203ENST00000481699 KRTAP13-2Q52LG2 175 aa13.63□□□□□ -0.23
SHISA4-203ENST00000481699 SMIM29Q86T20 159 aa13.61□□□□□ -0.23
SHISA4-203ENST00000481699 Q8NBF4 154 aa13.61□□□□□ -0.23
SHISA4-203ENST00000481699 BAALC-AS2P0C853 105 aa13.6□□□□□ -0.23
SHISA4-203ENST00000481699 C9JAW5 83 aa13.59□□□□□ -0.23
SHISA4-203ENST00000481699 KRTAP10-8P60410 259 aa13.59□□□□□ -0.23
SHISA4-203ENST00000481699 H3BMG7 143 aa13.58□□□□□ -0.24
SHISA4-203ENST00000481699 NDUFV3P56181 108 aaKnown RBP13.58□□□□□ -0.24
SHISA4-203ENST00000481699 SSBP3-AS1Q7Z2R9 100 aa13.58□□□□□ -0.24
SHISA4-203ENST00000481699 FAT3Q8TDW7 4589 aa13.57□□□□□ -0.24
SHISA4-203ENST00000481699 K7EP34 96 aa13.56□□□□□ -0.24
SHISA4-203ENST00000481699 GTF2H5Q6ZYL4 71 aa13.56□□□□□ -0.24
SHISA4-203ENST00000481699 LRP1Q07954 4544 aaKnown RBP13.56□□□□□ -0.24
SHISA4-203ENST00000481699 UBR4Q5T4S7 5183 aa13.56□□□□□ -0.24
SHISA4-203ENST00000481699 MT1HL1P0DM35 61 aa13.54□□□□□ -0.24
SHISA4-203ENST00000481699 UBE2V1Q13404 147 aa13.54□□□□□ -0.24
SHISA4-203ENST00000481699 C4orf48Q5BLP8 95 aa13.53□□□□□ -0.24
SHISA4-203ENST00000481699 ANKRD29Q8N6D5 301 aa13.52□□□□□ -0.25
SHISA4-203ENST00000481699 LINC00304Q8N9R0 145 aa13.51□□□□□ -0.25
SHISA4-203ENST00000481699 Q6JHZ5 121 aa13.5□□□□□ -0.25
SHISA4-203ENST00000481699 A0A1B0GV72 72 aa13.48□□□□□ -0.25
SHISA4-203ENST00000481699 H3BT86 120 aa13.48□□□□□ -0.25
SHISA4-203ENST00000481699 MTURNQ8N3F0 131 aa13.48□□□□□ -0.25
SHISA4-203ENST00000481699 IGLV8-61A0A075B6I0 122 aa13.47□□□□□ -0.25
SHISA4-203ENST00000481699 SPAG11AQ6PDA7 123 aa13.46□□□□□ -0.25
SHISA4-203ENST00000481699 HMCN2Q8NDA2 5059 aa13.42□□□□□ -0.26
SHISA4-203ENST00000481699 RBM3P98179 157 aaKnown RBP13.41□□□□□ -0.26
SHISA4-203ENST00000481699 IGFL1Q6UW32 110 aa13.41□□□□□ -0.26
SHISA4-203ENST00000481699 HRCT1Q6UXD1 115 aa13.41□□□□□ -0.26
SHISA4-203ENST00000481699 JMJD7-PLA2G4BH0Y9G9 81 aa13.4□□□□□ -0.26
SHISA4-203ENST00000481699 A0A0G2JQZ4 141 aa13.39□□□□□ -0.27
SHISA4-203ENST00000481699 DSCR8Q96T75 97 aa13.39□□□□□ -0.27
SHISA4-203ENST00000481699 TNXBP22105 4242 aa13.38□□□□□ -0.27
SHISA4-203ENST00000481699 SPINK1P00995 79 aa13.38□□□□□ -0.27
SHISA4-203ENST00000481699 A0A1B0GV90 55 aa13.37□□□□□ -0.27
SHISA4-203ENST00000481699 CD164Q04900 197 aa13.37□□□□□ -0.27
SHISA4-203ENST00000481699 F8W1H4 67 aa13.34□□□□□ -0.27
SHISA4-203ENST00000481699 PRO0461Q9UI25 63 aa13.34□□□□□ -0.27
SHISA4-203ENST00000481699 SMCPP49901 116 aaPredicted RBP13.31□□□□□ -0.28
SHISA4-203ENST00000481699 LIMD2Q9BT23 127 aa13.31□□□□□ -0.28
SHISA4-203ENST00000481699 TEN1Q86WV5 123 aa13.3□□□□□ -0.28
SHISA4-203ENST00000481699 TRBV7-4A0A0J9YYF1 115 aa13.29□□□□□ -0.28
SHISA4-203ENST00000481699 RPS29P62273 56 aaKnown RBP13.29□□□□□ -0.28
SHISA4-203ENST00000481699 VPS25Q9BRG1 176 aa13.29□□□□□ -0.28
SHISA4-203ENST00000481699 CCKP06307 115 aa13.28□□□□□ -0.28
SHISA4-203ENST00000481699 PDE6GP18545 87 aa13.28□□□□□ -0.28
SHISA4-203ENST00000481699 C14orf132Q9NPU4 83 aa13.28□□□□□ -0.28
SHISA4-203ENST00000481699 OBSCN-AS1Q96MR7 158 aa13.27□□□□□ -0.29
SHISA4-203ENST00000481699 TRBV7-7A0A0K0K1E9 115 aa13.26□□□□□ -0.29
SHISA4-203ENST00000481699 Q6Q795 121 aa13.25□□□□□ -0.29
SHISA4-203ENST00000481699 LOC110117498A0A087WWA1 95 aa13.24□□□□□ -0.29
SHISA4-203ENST00000481699 A0A1W2PNM2 257 aa13.23□□□□□ -0.29
SHISA4-203ENST00000481699 C21orf62-AS1Q17RA5 79 aa13.23□□□□□ -0.29
SHISA4-203ENST00000481699 Q6ZQT0 140 aa13.21□□□□□ -0.29
SHISA4-203ENST00000481699 SS18L2Q9UHA2 77 aa13.2□□□□□ -0.3
SHISA4-203ENST00000481699 A0A087WSZ3 146 aa13.18□□□□□ -0.3
SHISA4-203ENST00000481699 ETDBQ3ZM63 59 aa13.17□□□□□ -0.3
SHISA4-203ENST00000481699 Q5XG85 94 aa13.17□□□□□ -0.3
SHISA4-203ENST00000481699 RETNLBQ9BQ08 111 aa13.15□□□□□ -0.3
SHISA4-203ENST00000481699 PRR4Q16378 134 aa13.12□□□□□ -0.31
SHISA4-203ENST00000481699 A0A1B0GW54 56 aa13.11□□□□□ -0.31
SHISA4-203ENST00000481699 ASB16-AS1Q495Z4 193 aa13.08□□□□□ -0.32
SHISA4-203ENST00000481699 FP248Q71RG6 208 aaPredicted RBP13.05□□□□□ -0.32
SHISA4-203ENST00000481699 C1orf195Q5TG92 126 aa13.04□□□□□ -0.32
SHISA4-203ENST00000481699 IGLV7-46A0A075B6I9 117 aa13□□□□□ -0.33
SHISA4-203ENST00000481699 NREPQ16612 68 aa12.97□□□□□ -0.33
SHISA4-203ENST00000481699 RNF213Q63HN8 5207 aa12.94□□□□□ -0.34
SHISA4-203ENST00000481699 SIGMAR1Q99720 223 aa12.93□□□□□ -0.34
SHISA4-203ENST00000481699 IGKV4-1P06312 121 aa12.92□□□□□ -0.34
SHISA4-203ENST00000481699 LRP2P98164 4655 aa12.91□□□□□ -0.34
SHISA4-203ENST00000481699 Q96NJ1 140 aa12.91□□□□□ -0.34
SHISA4-203ENST00000481699 LINC00472Q9H8W2 130 aa12.91□□□□□ -0.34
SHISA4-203ENST00000481699 DEFB116Q30KQ4 102 aa12.9□□□□□ -0.34
SHISA4-203ENST00000481699 J3KT08 172 aa12.89□□□□□ -0.35
SHISA4-203ENST00000481699 UBL5Q9BZL1 73 aa12.89□□□□□ -0.35
SHISA4-203ENST00000481699 ACYP1P07311 99 aa12.86□□□□□ -0.35
SHISA4-203ENST00000481699 LINC00846Q9NV44 126 aa12.86□□□□□ -0.35
SHISA4-203ENST00000481699 J3QR89 54 aa12.84□□□□□ -0.35
SHISA4-203ENST00000481699 Q6ZVQ6 151 aa12.84□□□□□ -0.35
SHISA4-203ENST00000481699 TPRXLQ17RH7 258 aa12.83□□□□□ -0.36
SHISA4-203ENST00000481699 FAM240AA0A1B0GVK7 77 aa12.81□□□□□ -0.36
SHISA4-203ENST00000481699 BPY2O14599 106 aa12.79□□□□□ -0.36
SHISA4-203ENST00000481699 NDUFB1O75438 58 aa12.79□□□□□ -0.36
SHISA4-203ENST00000481699 KRTAP13-3Q3SY46 172 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms