RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TCL1BO95988 128 aa9.91□□□□□ -0.82
CLK1-211ENST00000481641 RPL37P61927 97 aaKnown RBP9.91□□□□□ -0.82
CLK1-211ENST00000481641 C12orf57Q99622 126 aa9.9□□□□□ -0.82
CLK1-211ENST00000481641 IGFL1Q6UW32 110 aa9.87□□□□□ -0.83
CLK1-211ENST00000481641 TRBV7-7A0A0K0K1E9 115 aa9.84□□□□□ -0.83
CLK1-211ENST00000481641 OCIAD2Q56VL3 154 aa9.84□□□□□ -0.83
CLK1-211ENST00000481641 Q6JHZ5 121 aa9.84□□□□□ -0.83
CLK1-211ENST00000481641 CLEC2BQ92478 149 aa9.83□□□□□ -0.84
CLK1-211ENST00000481641 HIST1H4GQ99525 98 aa9.83□□□□□ -0.84
CLK1-211ENST00000481641 SCGB1D1O95968 90 aa9.81□□□□□ -0.84
CLK1-211ENST00000481641 S100A6P06703 90 aa9.81□□□□□ -0.84
CLK1-211ENST00000481641 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.81□□□□□ -0.84
CLK1-211ENST00000481641 CFC1BP0CG36 223 aa9.8□□□□□ -0.84
CLK1-211ENST00000481641 H3BUT2 72 aa9.79□□□□□ -0.84
CLK1-211ENST00000481641 COX8AP10176 69 aa9.78□□□□□ -0.84
CLK1-211ENST00000481641 LORP23490 312 aaPredicted RBP9.78□□□□□ -0.84
CLK1-211ENST00000481641 KRTAP10-6P60371 365 aaPredicted RBP9.78□□□□□ -0.84
CLK1-211ENST00000481641 BVES-AS1Q5T3Y7 98 aa9.78□□□□□ -0.84
CLK1-211ENST00000481641 SNHG12Q9BXW3 62 aa9.78□□□□□ -0.84
CLK1-211ENST00000481641 CRCT1Q9UGL9 99 aa9.78□□□□□ -0.84
CLK1-211ENST00000481641 COX6B2Q6YFQ2 88 aa9.77□□□□□ -0.85
CLK1-211ENST00000481641 FLGP20930 4061 aaPredicted RBP9.76□□□□□ -0.85
CLK1-211ENST00000481641 OBSCN-AS1Q96MR7 158 aa9.76□□□□□ -0.85
CLK1-211ENST00000481641 FSIP2Q5CZC0 6907 aa9.76□□□□□ -0.85
CLK1-211ENST00000481641 M0R2T5 61 aa9.74□□□□□ -0.85
CLK1-211ENST00000481641 CFC1P0CG37 223 aa9.74□□□□□ -0.85
CLK1-211ENST00000481641 PPDPFLQ8WWR9 84 aa9.74□□□□□ -0.85
CLK1-211ENST00000481641 S100A1P23297 94 aa9.73□□□□□ -0.85
CLK1-211ENST00000481641 C14orf144Q96I85 54 aa9.73□□□□□ -0.85
CLK1-211ENST00000481641 LST1O00453 97 aa9.71□□□□□ -0.86
CLK1-211ENST00000481641 DLEU1O43261 78 aa9.71□□□□□ -0.86
CLK1-211ENST00000481641 RAB37Q96AX2 223 aa9.7□□□□□ -0.86
CLK1-211ENST00000481641 FAM218AQ96MZ4 157 aa9.7□□□□□ -0.86
CLK1-211ENST00000481641 ATP11AUNQ6ZP68 121 aa9.68□□□□□ -0.86
CLK1-211ENST00000481641 Q75L30 129 aa9.68□□□□□ -0.86
CLK1-211ENST00000481641 PAM16Q9Y3D7 125 aa9.67□□□□□ -0.86
CLK1-211ENST00000481641 SPATA45Q537H7 98 aa9.66□□□□□ -0.86
CLK1-211ENST00000481641 Q96NJ1 140 aa9.66□□□□□ -0.86
CLK1-211ENST00000481641 A0A0B4J2C4 111 aa9.65□□□□□ -0.86
CLK1-211ENST00000481641 NDUFV3P56181 108 aaKnown RBP9.65□□□□□ -0.86
CLK1-211ENST00000481641 Q6Q795 121 aa9.65□□□□□ -0.86
CLK1-211ENST00000481641 C2orf91Q6ZV80 131 aa9.65□□□□□ -0.86
CLK1-211ENST00000481641 HIGD1BQ9P298 99 aa9.65□□□□□ -0.86
CLK1-211ENST00000481641 H0YGX0 51 aa9.64□□□□□ -0.87
CLK1-211ENST00000481641 SNCGO76070 127 aa9.62□□□□□ -0.87
CLK1-211ENST00000481641 TEN1Q86WV5 123 aa9.62□□□□□ -0.87
CLK1-211ENST00000481641 SS18L2Q9UHA2 77 aa9.62□□□□□ -0.87
CLK1-211ENST00000481641 A0A087WSZ3 146 aa9.61□□□□□ -0.87
CLK1-211ENST00000481641 H3BMG7 143 aa9.59□□□□□ -0.87
CLK1-211ENST00000481641 CEND1Q8N111 149 aa9.59□□□□□ -0.87
CLK1-211ENST00000481641 VAMP8Q9BV40 100 aa9.59□□□□□ -0.87
CLK1-211ENST00000481641 FABP2P12104 132 aa9.58□□□□□ -0.88
CLK1-211ENST00000481641 C20orf166-AS1Q96NR2 134 aa9.57□□□□□ -0.88
CLK1-211ENST00000481641 PRO1854Q9UHT4 67 aa9.57□□□□□ -0.88
CLK1-211ENST00000481641 FXYD2P54710 66 aa9.56□□□□□ -0.88
CLK1-211ENST00000481641 A8MUU9 505 aa9.55□□□□□ -0.88
CLK1-211ENST00000481641 DSCR10P59022 87 aa9.55□□□□□ -0.88
CLK1-211ENST00000481641 A0A1W2PNM2 257 aa9.54□□□□□ -0.88
CLK1-211ENST00000481641 TRIAP1O43715 76 aa9.54□□□□□ -0.88
CLK1-211ENST00000481641 A0A1B0GX51 115 aa9.53□□□□□ -0.88
CLK1-211ENST00000481641 A0A1B0GV72 72 aa9.51□□□□□ -0.89
CLK1-211ENST00000481641 TMEM238LA0A1B0GVL6 79 aa9.51□□□□□ -0.89
CLK1-211ENST00000481641 A6NJY4 79 aa9.51□□□□□ -0.89
CLK1-211ENST00000481641 SIGMAR1Q99720 223 aa9.5□□□□□ -0.89
CLK1-211ENST00000481641 GHRHP01286 108 aa9.49□□□□□ -0.89
CLK1-211ENST00000481641 K7ERJ3 54 aa9.46□□□□□ -0.9
CLK1-211ENST00000481641 ANKRD29Q8N6D5 301 aa9.46□□□□□ -0.9
CLK1-211ENST00000481641 KRTAP16-1A8MUX0 517 aa9.45□□□□□ -0.9
CLK1-211ENST00000481641 IGKV4-1P06312 121 aa9.44□□□□□ -0.9
CLK1-211ENST00000481641 ORMDL1Q9P0S3 153 aa9.44□□□□□ -0.9
CLK1-211ENST00000481641 DNAL4O96015 105 aa9.43□□□□□ -0.9
CLK1-211ENST00000481641 PSMB2P49721 201 aa9.43□□□□□ -0.9
CLK1-211ENST00000481641 LINC00313P59037 77 aa9.43□□□□□ -0.9
CLK1-211ENST00000481641 DEFB116Q30KQ4 102 aa9.43□□□□□ -0.9
CLK1-211ENST00000481641 NOTCH2NLQ7Z3S9 236 aa9.43□□□□□ -0.9
CLK1-211ENST00000481641 TRBV20-1A0A075B6N2 111 aa9.42□□□□□ -0.9
CLK1-211ENST00000481641 TRBV7-4A0A0J9YYF1 115 aa9.41□□□□□ -0.9
CLK1-211ENST00000481641 HSD52Q0P140 79 aa9.41□□□□□ -0.9
CLK1-211ENST00000481641 PYY3Q5JQD4 70 aa9.4□□□□□ -0.9
CLK1-211ENST00000481641 KRTAP9-8Q9BYQ0 159 aa9.4□□□□□ -0.9
CLK1-211ENST00000481641 TMEM256-PLSCR3K7ERE1 68 aa9.37□□□□□ -0.91
CLK1-211ENST00000481641 CCKP06307 115 aa9.37□□□□□ -0.91
CLK1-211ENST00000481641 LINC00472Q9H8W2 130 aa9.37□□□□□ -0.91
CLK1-211ENST00000481641 H3BQ85 93 aa9.35□□□□□ -0.91
CLK1-211ENST00000481641 COX6CP09669 75 aa9.35□□□□□ -0.91
CLK1-211ENST00000481641 IGHV6-1A0A0B4J1U7 121 aa9.34□□□□□ -0.91
CLK1-211ENST00000481641 TRACP01848 142 aa9.34□□□□□ -0.91
CLK1-211ENST00000481641 FAM236DA0A1B0GTK5 79 aa9.32□□□□□ -0.92
CLK1-211ENST00000481641 FAM236CP0DP71 79 aa9.32□□□□□ -0.92
CLK1-211ENST00000481641 UBE2V1Q13404 147 aa9.31□□□□□ -0.92
CLK1-211ENST00000481641 VPS25Q9BRG1 176 aa9.31□□□□□ -0.92
CLK1-211ENST00000481641 HRES1P13985 223 aa9.3□□□□□ -0.92
CLK1-211ENST00000481641 UQCR10Q9UDW1 63 aa9.28□□□□□ -0.92
CLK1-211ENST00000481641 MPLKIPQ8TAP9 179 aa9.27□□□□□ -0.93
CLK1-211ENST00000481641 SCGB1C2P0DMR2 95 aa9.26□□□□□ -0.93
CLK1-211ENST00000481641 USH2AO75445 5202 aa9.25□□□□□ -0.93
CLK1-211ENST00000481641 MT2AP02795 61 aa9.25□□□□□ -0.93
CLK1-211ENST00000481641 RBM3P98179 157 aaKnown RBP9.25□□□□□ -0.93
CLK1-211ENST00000481641 A0A1B0GVX0 72 aa9.24□□□□□ -0.93
CLK1-211ENST00000481641 RBM12B-AS1Q9P1G2 102 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms