RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 JMJD1CQ15652 2540 aa1.12□□□□□ -2.23
PTPN12-211ENST00000481154 H3BSH0 61 aa1.12□□□□□ -2.23
PTPN12-211ENST00000481154 DEFB109BQ30KR1 87 aa1.12□□□□□ -2.23
PTPN12-211ENST00000481154 Q5VSD8 79 aa1.12□□□□□ -2.23
PTPN12-211ENST00000481154 PDE4DIPQ5VU43 2346 aa1.11□□□□□ -2.23
PTPN12-211ENST00000481154 SPRR1BP22528 89 aa1.11□□□□□ -2.23
PTPN12-211ENST00000481154 PRCDQ00LT1 54 aa1.11□□□□□ -2.23
PTPN12-211ENST00000481154 LELP1Q5T871 98 aa1.11□□□□□ -2.23
PTPN12-211ENST00000481154 PIEZO2Q9H5I5 2752 aa1.1□□□□□ -2.23
PTPN12-211ENST00000481154 PTPRQQ9UMZ3 2332 aa1.1□□□□□ -2.23
PTPN12-211ENST00000481154 PLCE1Q9P212 2302 aa1.09□□□□□ -2.23
PTPN12-211ENST00000481154 M0QY20 66 aa1.09□□□□□ -2.23
PTPN12-211ENST00000481154 PRLHP81277 87 aa1.09□□□□□ -2.23
PTPN12-211ENST00000481154 LEAP2Q969E1 77 aa1.09□□□□□ -2.23
PTPN12-211ENST00000481154 CNTRLQ7Z7A1 2325 aa1.09□□□□□ -2.24
PTPN12-211ENST00000481154 KNL1Q8NG31 2342 aa1.09□□□□□ -2.24
PTPN12-211ENST00000481154 PTPRZ1P23471 2315 aaPredicted RBP1.08□□□□□ -2.24
PTPN12-211ENST00000481154 PKDREJQ9NTG1 2253 aa1.08□□□□□ -2.24
PTPN12-211ENST00000481154 ALMS1Q8TCU4 4167 aa1.07□□□□□ -2.24
PTPN12-211ENST00000481154 MMP24-AS1A0A0U1RRL7 71 aa1.07□□□□□ -2.24
PTPN12-211ENST00000481154 NOP10Q9NPE3 64 aaKnown RBP1.07□□□□□ -2.24
PTPN12-211ENST00000481154 TOMM7Q9P0U1 55 aa1.07□□□□□ -2.24
PTPN12-211ENST00000481154 NOTCH1P46531 2555 aa1.06□□□□□ -2.24
PTPN12-211ENST00000481154 FBN2P35556 2912 aa1.06□□□□□ -2.24
PTPN12-211ENST00000481154 USF3Q68DE3 2245 aa1.05□□□□□ -2.24
PTPN12-211ENST00000481154 KLK9Q2XQG4 91 aa1.05□□□□□ -2.24
PTPN12-211ENST00000481154 TPRP12270 2363 aaKnown RBP1.05□□□□□ -2.24
PTPN12-211ENST00000481154 K7EIM0 57 aa1.04□□□□□ -2.24
PTPN12-211ENST00000481154 S4R3F8 94 aa1.04□□□□□ -2.24
PTPN12-211ENST00000481154 ZNF462Q96JM2 2506 aa1.03□□□□□ -2.24
PTPN12-211ENST00000481154 CLPSL2Q6UWE3 100 aa1.03□□□□□ -2.24
PTPN12-211ENST00000481154 AHNAK2Q8IVF2 5795 aa1.03□□□□□ -2.24
PTPN12-211ENST00000481154 ASH1LQ9NR48 2969 aaKnown RBP1.03□□□□□ -2.24
PTPN12-211ENST00000481154 A0A0D9SG42 100 aa1.02□□□□□ -2.25
PTPN12-211ENST00000481154 A8MTW9 85 aa1.02□□□□□ -2.25
PTPN12-211ENST00000481154 C2CD3Q4AC94 2353 aa1.02□□□□□ -2.25
PTPN12-211ENST00000481154 DEFB106AQ8N104 65 aa1.02□□□□□ -2.25
PTPN12-211ENST00000481154 TMEM167AQ8TBQ9 72 aa1.02□□□□□ -2.25
PTPN12-211ENST00000481154 SPINK1P00995 79 aa1.01□□□□□ -2.25
PTPN12-211ENST00000481154 TENM3Q9P273 2699 aa1.01□□□□□ -2.25
PTPN12-211ENST00000481154 SPTBN2O15020 2390 aa1□□□□□ -2.25
PTPN12-211ENST00000481154 PCNX1Q96RV3 2341 aa1□□□□□ -2.25
PTPN12-211ENST00000481154 DSPP15924 2871 aaKnown RBP0.98□□□□□ -2.25
PTPN12-211ENST00000481154 SPTBN1Q01082 2364 aaKnown RBP0.98□□□□□ -2.25
PTPN12-211ENST00000481154 DEFB104AQ8WTQ1 72 aa0.98□□□□□ -2.25
PTPN12-211ENST00000481154 IGF2RP11717 2491 aa0.97□□□□□ -2.25
PTPN12-211ENST00000481154 H0YGG7 62 aa0.97□□□□□ -2.25
PTPN12-211ENST00000481154 RPL39P5Q59GN2 51 aa0.96□□□□□ -2.26
PTPN12-211ENST00000481154 ZNF292O60281 2723 aa0.95□□□□□ -2.26
PTPN12-211ENST00000481154 DEFB108AA8MXU0 73 aa0.95□□□□□ -2.26
PTPN12-211ENST00000481154 M0QZ58 72 aa0.95□□□□□ -2.26
PTPN12-211ENST00000481154 CSPG4Q6UVK1 2322 aa0.95□□□□□ -2.26
PTPN12-211ENST00000481154 ZNF469Q96JG9 3925 aaPredicted RBP0.95□□□□□ -2.26
PTPN12-211ENST00000481154 ABCA2Q9BZC7 2435 aa0.95□□□□□ -2.26
PTPN12-211ENST00000481154 ABCA12Q86UK0 2595 aa0.95□□□□□ -2.26
PTPN12-211ENST00000481154 TRANK1O15050 2925 aa0.94□□□□□ -2.26
PTPN12-211ENST00000481154 MEGF8Q7Z7M0 2845 aa0.94□□□□□ -2.26
PTPN12-211ENST00000481154 REV3LO60673 3130 aa0.93□□□□□ -2.26
PTPN12-211ENST00000481154 CELSR2Q9HCU4 2923 aa0.92□□□□□ -2.26
PTPN12-211ENST00000481154 CACNA1HO95180 2353 aa0.91□□□□□ -2.26
PTPN12-211ENST00000481154 SRRM2Q9UQ35 2752 aaKnown RBP0.91□□□□□ -2.26
PTPN12-211ENST00000481154 A0A0C4DFX4 3053 aa0.9□□□□□ -2.27
PTPN12-211ENST00000481154 AKAP6Q13023 2319 aa0.9□□□□□ -2.27
PTPN12-211ENST00000481154 GVINP1Q7Z2Y8 2422 aa0.9□□□□□ -2.27
PTPN12-211ENST00000481154 CHD9Q3L8U1 2897 aa0.9□□□□□ -2.27
PTPN12-211ENST00000481154 F8P00451 2351 aa0.89□□□□□ -2.27
PTPN12-211ENST00000481154 H3BUX3 64 aa0.89□□□□□ -2.27
PTPN12-211ENST00000481154 DEFB135Q30KP9 77 aa0.89□□□□□ -2.27
PTPN12-211ENST00000481154 PKD1L2Q7Z442 2459 aa0.88□□□□□ -2.27
PTPN12-211ENST00000481154 SPART-AS1P0CW21 52 aa0.87□□□□□ -2.27
PTPN12-211ENST00000481154 SPINK6Q6UWN8 80 aa0.87□□□□□ -2.27
PTPN12-211ENST00000481154 TTC28Q96AY4 2481 aa0.87□□□□□ -2.27
PTPN12-211ENST00000481154 PRRC2CQ9Y520 2896 aaKnown RBP0.86□□□□□ -2.27
PTPN12-211ENST00000481154 M0R2T5 61 aa0.86□□□□□ -2.27
PTPN12-211ENST00000481154 CHD7Q9P2D1 2997 aa0.86□□□□□ -2.27
PTPN12-211ENST00000481154 SPTA1P02549 2419 aa0.85□□□□□ -2.27
PTPN12-211ENST00000481154 POLQO75417 2590 aa0.85□□□□□ -2.27
PTPN12-211ENST00000481154 C9orf92A6NGG3 77 aa0.85□□□□□ -2.27
PTPN12-211ENST00000481154 TNP1P09430 55 aa0.85□□□□□ -2.27
PTPN12-211ENST00000481154 HECTD1Q9ULT8 2610 aa0.85□□□□□ -2.27
PTPN12-211ENST00000481154 CREBBPQ92793 2442 aa0.85□□□□□ -2.27
PTPN12-211ENST00000481154 UBR5O95071 2799 aaPredicted RBP0.85□□□□□ -2.27
PTPN12-211ENST00000481154 TENM4Q6N022 2769 aa0.85□□□□□ -2.27
PTPN12-211ENST00000481154 CEP290O15078 2479 aa0.84□□□□□ -2.27
PTPN12-211ENST00000481154 ATRQ13535 2644 aa0.84□□□□□ -2.27
PTPN12-211ENST00000481154 RHPN1-AS1Q9BWJ2 59 aa0.84□□□□□ -2.27
PTPN12-211ENST00000481154 APELAP0DMC3 54 aa0.83□□□□□ -2.28
PTPN12-211ENST00000481154 HTN1P15515 57 aa0.83□□□□□ -2.28
PTPN12-211ENST00000481154 ACACAQ13085 2346 aa0.83□□□□□ -2.28
PTPN12-211ENST00000481154 AKAP13Q12802 2813 aa0.83□□□□□ -2.28
PTPN12-211ENST00000481154 EP300Q09472 2414 aaPredicted RBP0.83□□□□□ -2.28
PTPN12-211ENST00000481154 VWFP04275 2813 aa0.82□□□□□ -2.28
PTPN12-211ENST00000481154 COL6A5A8TX70 2615 aa0.82□□□□□ -2.28
PTPN12-211ENST00000481154 WNK1Q9H4A3 2382 aa0.81□□□□□ -2.28
PTPN12-211ENST00000481154 U3KQA8 63 aa0.81□□□□□ -2.28
PTPN12-211ENST00000481154 NCOR1O75376 2440 aa0.8□□□□□ -2.28
PTPN12-211ENST00000481154 TENM2Q9NT68 2774 aa0.8□□□□□ -2.28
PTPN12-211ENST00000481154 MUC5BQ9HC84 5762 aaPredicted RBP0.8□□□□□ -2.28
PTPN12-211ENST00000481154 CHD8Q9HCK8 2581 aa0.8□□□□□ -2.28
PTPN12-211ENST00000481154 CHD6Q8TD26 2715 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms