RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 Q96NJ1 140 aa2.52□□□□□ -2.01
PBRM1-220ENST00000480064 CRIPTQ9P021 101 aa2.52□□□□□ -2.01
PBRM1-220ENST00000480064 ABCA4P78363 2273 aa2.52□□□□□ -2.01
PBRM1-220ENST00000480064 NBDYA0A0U1RRE5 68 aa2.51□□□□□ -2.01
PBRM1-220ENST00000480064 KNL1Q8NG31 2342 aa2.51□□□□□ -2.01
PBRM1-220ENST00000480064 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
PBRM1-220ENST00000480064 UNC80Q8N2C7 3258 aa2.5□□□□□ -2.01
PBRM1-220ENST00000480064 WNK2Q9Y3S1 2297 aa2.49□□□□□ -2.01
PBRM1-220ENST00000480064 EYSQ5T1H1 3165 aa2.49□□□□□ -2.01
PBRM1-220ENST00000480064 LYNX1P0DP58 116 aa2.48□□□□□ -2.01
PBRM1-220ENST00000480064 CACNA1BQ00975 2339 aa2.47□□□□□ -2.01
PBRM1-220ENST00000480064 VCANP13611 3396 aa2.47□□□□□ -2.01
PBRM1-220ENST00000480064 H3BNG1 76 aa2.46□□□□□ -2.02
PBRM1-220ENST00000480064 HIVEP2P31629 2446 aa2.46□□□□□ -2.02
PBRM1-220ENST00000480064 DEFB130BP0DP73 79 aa2.44□□□□□ -2.02
PBRM1-220ENST00000480064 DEFB130AP0DP74 79 aa2.44□□□□□ -2.02
PBRM1-220ENST00000480064 H1FX-AS1Q4G0G2 97 aa2.44□□□□□ -2.02
PBRM1-220ENST00000480064 Q6ZSA8 131 aa2.44□□□□□ -2.02
PBRM1-220ENST00000480064 DOPEY2Q9Y3R5 2298 aa2.43□□□□□ -2.02
PBRM1-220ENST00000480064 H0YAA0 97 aa2.43□□□□□ -2.02
PBRM1-220ENST00000480064 RPL37P61927 97 aaKnown RBP2.43□□□□□ -2.02
PBRM1-220ENST00000480064 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
PBRM1-220ENST00000480064 MAST4O15021 2626 aa2.42□□□□□ -2.02
PBRM1-220ENST00000480064 AHCTF1Q8WYP5 2266 aa2.42□□□□□ -2.02
PBRM1-220ENST00000480064 LAMA2P24043 3122 aaKnown RBP2.42□□□□□ -2.02
PBRM1-220ENST00000480064 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
PBRM1-220ENST00000480064 SPTBN5Q9NRC6 3674 aaKnown RBP2.41□□□□□ -2.02
PBRM1-220ENST00000480064 CHD8Q9HCK8 2581 aa2.41□□□□□ -2.02
PBRM1-220ENST00000480064 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
PBRM1-220ENST00000480064 SPART-AS1P0CW21 52 aa2.4□□□□□ -2.03
PBRM1-220ENST00000480064 DEFB136Q30KP8 78 aa2.4□□□□□ -2.03
PBRM1-220ENST00000480064 C10orf99Q6UWK7 81 aa2.4□□□□□ -2.03
PBRM1-220ENST00000480064 NAV2Q8IVL1 2488 aa2.4□□□□□ -2.03
PBRM1-220ENST00000480064 WNK1Q9H4A3 2382 aa2.39□□□□□ -2.03
PBRM1-220ENST00000480064 SPTBN1Q01082 2364 aaKnown RBP2.39□□□□□ -2.03
PBRM1-220ENST00000480064 MUC3AQ02505 3323 aa2.39□□□□□ -2.03
PBRM1-220ENST00000480064 FLG2Q5D862 2391 aaPredicted RBP2.38□□□□□ -2.03
PBRM1-220ENST00000480064 KRTAP21-3Q3LHN1 58 aa2.38□□□□□ -2.03
PBRM1-220ENST00000480064 LINC01556Q5JQF7 62 aa2.38□□□□□ -2.03
PBRM1-220ENST00000480064 RP1L1Q8IWN7 2480 aaPredicted RBP2.38□□□□□ -2.03
PBRM1-220ENST00000480064 CFAP47Q6ZTR5 3102 aa2.38□□□□□ -2.03
PBRM1-220ENST00000480064 A0A096LPF7 62 aa2.36□□□□□ -2.03
PBRM1-220ENST00000480064 ANKRD11Q6UB99 2663 aaPredicted RBP2.36□□□□□ -2.03
PBRM1-220ENST00000480064 CHD6Q8TD26 2715 aa2.35□□□□□ -2.03
PBRM1-220ENST00000480064 MKI67P46013 3256 aaKnown RBP2.35□□□□□ -2.03
PBRM1-220ENST00000480064 USP24Q9UPU5 2620 aa2.35□□□□□ -2.03
PBRM1-220ENST00000480064 PRLHP81277 87 aa2.35□□□□□ -2.03
PBRM1-220ENST00000480064 USP9XQ93008 2570 aaPredicted RBP2.35□□□□□ -2.03
PBRM1-220ENST00000480064 ZFHX4Q86UP3 3567 aa2.35□□□□□ -2.03
PBRM1-220ENST00000480064 WDR87Q6ZQQ6 2873 aa2.35□□□□□ -2.03
PBRM1-220ENST00000480064 TEP1Q99973 2627 aaKnown RBP2.35□□□□□ -2.03
PBRM1-220ENST00000480064 K7EIL1 84 aa2.34□□□□□ -2.03
PBRM1-220ENST00000480064 BDP1A6H8Y1 2624 aa2.33□□□□□ -2.04
PBRM1-220ENST00000480064 CENPFP49454 3210 aa2.32□□□□□ -2.04
PBRM1-220ENST00000480064 FASNP49327 2511 aaKnown RBP2.32□□□□□ -2.04
PBRM1-220ENST00000480064 UBE2DNLQ8IWF7 75 aa2.32□□□□□ -2.04
PBRM1-220ENST00000480064 CACNA1EQ15878 2313 aa2.32□□□□□ -2.04
PBRM1-220ENST00000480064 ZNF462Q96JM2 2506 aa2.32□□□□□ -2.04
PBRM1-220ENST00000480064 TRIOBPQ9H2D6 2365 aa2.31□□□□□ -2.04
PBRM1-220ENST00000480064 FBN1P35555 2871 aaKnown RBP2.31□□□□□ -2.04
PBRM1-220ENST00000480064 DEFB124Q8NES8 71 aa2.31□□□□□ -2.04
PBRM1-220ENST00000480064 FAM186AA6NE01 2351 aa2.31□□□□□ -2.04
PBRM1-220ENST00000480064 PIEZO1Q92508 2521 aa2.31□□□□□ -2.04
PBRM1-220ENST00000480064 BRCA2P51587 3418 aa2.3□□□□□ -2.04
PBRM1-220ENST00000480064 SPINK1P00995 79 aa2.3□□□□□ -2.04
PBRM1-220ENST00000480064 FLNBO75369 2602 aaKnown RBP2.3□□□□□ -2.04
PBRM1-220ENST00000480064 RANBP2P49792 3224 aaKnown RBP2.29□□□□□ -2.04
PBRM1-220ENST00000480064 ALMS1Q8TCU4 4167 aa2.29□□□□□ -2.04
PBRM1-220ENST00000480064 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
PBRM1-220ENST00000480064 DEFB123Q8N688 67 aa2.29□□□□□ -2.04
PBRM1-220ENST00000480064 TPRP12270 2363 aaKnown RBP2.29□□□□□ -2.04
PBRM1-220ENST00000480064 PRUNE2Q8WUY3 3088 aa2.28□□□□□ -2.04
PBRM1-220ENST00000480064 CFAP54Q96N23 3096 aa2.28□□□□□ -2.04
PBRM1-220ENST00000480064 SPTBN2O15020 2390 aa2.28□□□□□ -2.04
PBRM1-220ENST00000480064 CEP250Q9BV73 2442 aa2.28□□□□□ -2.04
PBRM1-220ENST00000480064 ITPR3Q14573 2671 aa2.27□□□□□ -2.05
PBRM1-220ENST00000480064 ASH1LQ9NR48 2969 aaKnown RBP2.27□□□□□ -2.05
PBRM1-220ENST00000480064 MAP1BP46821 2468 aaKnown RBP2.27□□□□□ -2.05
PBRM1-220ENST00000480064 CNOT1A5YKK6 2376 aaKnown RBP2.27□□□□□ -2.05
PBRM1-220ENST00000480064 PKDREJQ9NTG1 2253 aa2.26□□□□□ -2.05
PBRM1-220ENST00000480064 DNAH12Q6ZR08 3092 aa2.26□□□□□ -2.05
PBRM1-220ENST00000480064 EPG5Q9HCE0 2579 aa2.26□□□□□ -2.05
PBRM1-220ENST00000480064 C5orf42Q9H799 3197 aa2.26□□□□□ -2.05
PBRM1-220ENST00000480064 A0A096LNI7 61 aa2.26□□□□□ -2.05
PBRM1-220ENST00000480064 HTN3P15516 51 aa2.26□□□□□ -2.05
PBRM1-220ENST00000480064 SPEGQ15772 3267 aa2.25□□□□□ -2.05
PBRM1-220ENST00000480064 ZNF292O60281 2723 aa2.25□□□□□ -2.05
PBRM1-220ENST00000480064 HTTP42858 3142 aa2.24□□□□□ -2.05
PBRM1-220ENST00000480064 ZDBF2Q9HCK1 2354 aa2.24□□□□□ -2.05
PBRM1-220ENST00000480064 SPINK6Q6UWN8 80 aa2.24□□□□□ -2.05
PBRM1-220ENST00000480064 SPTBN4Q9H254 2564 aa2.24□□□□□ -2.05
PBRM1-220ENST00000480064 APC2O95996 2303 aa2.24□□□□□ -2.05
PBRM1-220ENST00000480064 KALRNO60229 2985 aa2.24□□□□□ -2.05
PBRM1-220ENST00000480064 DOPEY1Q5JWR5 2465 aa2.24□□□□□ -2.05
PBRM1-220ENST00000480064 DCHS1Q96JQ0 3298 aa2.23□□□□□ -2.05
PBRM1-220ENST00000480064 ANKRD17O75179 2603 aaKnown RBP2.23□□□□□ -2.05
PBRM1-220ENST00000480064 MYO18BQ8IUG5 2567 aa2.23□□□□□ -2.05
PBRM1-220ENST00000480064 GCN1Q92616 2671 aaKnown RBP2.23□□□□□ -2.05
PBRM1-220ENST00000480064 APLNQ9ULZ1 77 aa2.23□□□□□ -2.05
PBRM1-220ENST00000480064 S4R3F8 94 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms