RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 TNP2Q05952 138 aa12.16□□□□□ -0.46
TNFRSF8-204ENST00000479933 FAM30AQ9NZY2 134 aa12.15□□□□□ -0.46
TNFRSF8-204ENST00000479933 A0A096LNI7 61 aa12.14□□□□□ -0.47
TNFRSF8-204ENST00000479933 ST20-AS1Q8NBB2 130 aa12.14□□□□□ -0.47
TNFRSF8-204ENST00000479933 C1orf137Q5JT78 98 aa12.13□□□□□ -0.47
TNFRSF8-204ENST00000479933 PSPHP1O15172 72 aa12.11□□□□□ -0.47
TNFRSF8-204ENST00000479933 MGAM2Q2M2H8 2515 aa12.11□□□□□ -0.47
TNFRSF8-204ENST00000479933 C3orf84H3BNL1 204 aa12.11□□□□□ -0.47
TNFRSF8-204ENST00000479933 IGKV2-24A0A0C4DH68 120 aa12.1□□□□□ -0.47
TNFRSF8-204ENST00000479933 LRCOL1A6NCL2 159 aa12.1□□□□□ -0.47
TNFRSF8-204ENST00000479933 Q8NBF4 154 aa12.1□□□□□ -0.47
TNFRSF8-204ENST00000479933 NDUFB1O75438 58 aa12.09□□□□□ -0.47
TNFRSF8-204ENST00000479933 A0A1W2PNM2 257 aa12.08□□□□□ -0.47
TNFRSF8-204ENST00000479933 A0A1W2PNN7 141 aa12.07□□□□□ -0.48
TNFRSF8-204ENST00000479933 NUPR2A6NF83 97 aa12.07□□□□□ -0.48
TNFRSF8-204ENST00000479933 SPRR4Q96PI1 79 aa12.07□□□□□ -0.48
TNFRSF8-204ENST00000479933 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF8-204ENST00000479933 MDFIQ99750 246 aa12.05□□□□□ -0.48
TNFRSF8-204ENST00000479933 Q5VV11 94 aa12.04□□□□□ -0.48
TNFRSF8-204ENST00000479933 STAB2Q8WWQ8 2551 aa12.04□□□□□ -0.48
TNFRSF8-204ENST00000479933 KTN1-AS1Q86SY8 53 aa12.04□□□□□ -0.48
TNFRSF8-204ENST00000479933 NBDYA0A0U1RRE5 68 aa12.03□□□□□ -0.48
TNFRSF8-204ENST00000479933 A8MUN3 132 aa12.03□□□□□ -0.48
TNFRSF8-204ENST00000479933 UBE2AP49459 152 aa12.02□□□□□ -0.48
TNFRSF8-204ENST00000479933 DNAH9Q9NYC9 4486 aa12.02□□□□□ -0.49
TNFRSF8-204ENST00000479933 C9orf163Q8N9P6 203 aa12.02□□□□□ -0.49
TNFRSF8-204ENST00000479933 COL7A1Q02388 2944 aa12□□□□□ -0.49
TNFRSF8-204ENST00000479933 H0Y9J4 135 aa11.99□□□□□ -0.49
TNFRSF8-204ENST00000479933 PRLHP81277 87 aa11.99□□□□□ -0.49
TNFRSF8-204ENST00000479933 LINC00476Q8WZB0 136 aa11.99□□□□□ -0.49
TNFRSF8-204ENST00000479933 LIMD2Q9BT23 127 aa11.99□□□□□ -0.49
TNFRSF8-204ENST00000479933 DYNC2H1Q8NCM8 4307 aaKnown RBP11.99□□□□□ -0.49
TNFRSF8-204ENST00000479933 DSCR10P59022 87 aa11.98□□□□□ -0.49
TNFRSF8-204ENST00000479933 IGLV8-61A0A075B6I0 122 aa11.98□□□□□ -0.49
TNFRSF8-204ENST00000479933 SPANXA2-OT1Q8N9U9 137 aa11.96□□□□□ -0.49
TNFRSF8-204ENST00000479933 CHTF8P0CG12 524 aa11.95□□□□□ -0.5
TNFRSF8-204ENST00000479933 PHF5AQ7RTV0 110 aaKnown RBP11.95□□□□□ -0.5
TNFRSF8-204ENST00000479933 Q6ZRN7 208 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF8-204ENST00000479933 HCG22E2RYF7 251 aa11.93□□□□□ -0.5
TNFRSF8-204ENST00000479933 IGFL1Q6UW32 110 aa11.93□□□□□ -0.5
TNFRSF8-204ENST00000479933 K7EQZ3 153 aa11.92□□□□□ -0.5
TNFRSF8-204ENST00000479933 NDUFS5O43920 106 aa11.92□□□□□ -0.5
TNFRSF8-204ENST00000479933 SPRR1BP22528 89 aa11.92□□□□□ -0.5
TNFRSF8-204ENST00000479933 ATP11AUNQ6ZP68 121 aa11.92□□□□□ -0.5
TNFRSF8-204ENST00000479933 Q8N9P0 234 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF8-204ENST00000479933 RBM12B-AS1Q9P1G2 102 aa11.91□□□□□ -0.5
TNFRSF8-204ENST00000479933 DNAH10Q8IVF4 4471 aa11.9□□□□□ -0.5
TNFRSF8-204ENST00000479933 A8MU10 97 aa11.89□□□□□ -0.51
TNFRSF8-204ENST00000479933 MP68P56378 58 aa11.89□□□□□ -0.51
TNFRSF8-204ENST00000479933 H3BPC8 53 aa11.89□□□□□ -0.51
TNFRSF8-204ENST00000479933 KRTAP11-1Q8IUC1 163 aa11.89□□□□□ -0.51
TNFRSF8-204ENST00000479933 CHKB-CPT1BH3BT56 60 aa11.88□□□□□ -0.51
TNFRSF8-204ENST00000479933 PRR4Q16378 134 aa11.88□□□□□ -0.51
TNFRSF8-204ENST00000479933 Q75L30 129 aa11.88□□□□□ -0.51
TNFRSF8-204ENST00000479933 LINC00208Q96KT6 92 aa11.87□□□□□ -0.51
TNFRSF8-204ENST00000479933 LOC101927531A0A1B0GV80 90 aa11.84□□□□□ -0.51
TNFRSF8-204ENST00000479933 A6NN06 94 aa11.84□□□□□ -0.51
TNFRSF8-204ENST00000479933 LYSTQ99698 3801 aa11.84□□□□□ -0.51
TNFRSF8-204ENST00000479933 SPACA4Q8TDM5 124 aa11.81□□□□□ -0.52
TNFRSF8-204ENST00000479933 PRR15LQ9BU68 103 aa11.81□□□□□ -0.52
TNFRSF8-204ENST00000479933 A0A087WSZ3 146 aa11.8□□□□□ -0.52
TNFRSF8-204ENST00000479933 A0A0G2JQZ4 141 aa11.8□□□□□ -0.52
TNFRSF8-204ENST00000479933 A0A087WTM6 91 aa11.79□□□□□ -0.52
TNFRSF8-204ENST00000479933 PANO1I0J062 215 aa11.79□□□□□ -0.52
TNFRSF8-204ENST00000479933 LCA10Q71F78 164 aa11.79□□□□□ -0.52
TNFRSF8-204ENST00000479933 KRTAP13-1Q8IUC0 172 aa11.79□□□□□ -0.52
TNFRSF8-204ENST00000479933 PLECQ15149 4684 aaKnown RBP11.78□□□□□ -0.52
TNFRSF8-204ENST00000479933 CSMD3Q7Z407 3707 aa11.77□□□□□ -0.53
TNFRSF8-204ENST00000479933 CDC42SE1Q9NRR8 79 aa11.76□□□□□ -0.53
TNFRSF8-204ENST00000479933 TENM2Q9NT68 2774 aa11.75□□□□□ -0.53
TNFRSF8-204ENST00000479933 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF8-204ENST00000479933 KRTAP29-1A8MX34 341 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF8-204ENST00000479933 SPTSSBQ8NFR3 76 aa11.74□□□□□ -0.53
TNFRSF8-204ENST00000479933 DNAH7Q8WXX0 4024 aa11.73□□□□□ -0.53
TNFRSF8-204ENST00000479933 Q6ZR54 194 aa11.72□□□□□ -0.53
TNFRSF8-204ENST00000479933 C7orf65Q6ZTY9 151 aa11.72□□□□□ -0.53
TNFRSF8-204ENST00000479933 A6NED7 52 aa11.71□□□□□ -0.54
TNFRSF8-204ENST00000479933 H0Y9P7 68 aa11.71□□□□□ -0.54
TNFRSF8-204ENST00000479933 RTL8CO15255 209 aa11.71□□□□□ -0.54
TNFRSF8-204ENST00000479933 VPS13DQ5THJ4 4388 aa11.7□□□□□ -0.54
TNFRSF8-204ENST00000479933 DEFB116Q30KQ4 102 aa11.68□□□□□ -0.54
TNFRSF8-204ENST00000479933 WFDC13Q8IUB5 93 aa11.68□□□□□ -0.54
TNFRSF8-204ENST00000479933 ZNF706Q9Y5V0 76 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF8-204ENST00000479933 RPL37AP61513 92 aaKnown RBP11.66□□□□□ -0.54
TNFRSF8-204ENST00000479933 LINC00472Q9H8W2 130 aa11.66□□□□□ -0.54
TNFRSF8-204ENST00000479933 LINC00483Q53H64 154 aa11.65□□□□□ -0.54
TNFRSF8-204ENST00000479933 COA5Q86WW8 74 aa11.65□□□□□ -0.54
TNFRSF8-204ENST00000479933 PLAC8Q9NZF1 115 aa11.65□□□□□ -0.54
TNFRSF8-204ENST00000479933 IGLV7-46A0A075B6I9 117 aa11.63□□□□□ -0.55
TNFRSF8-204ENST00000479933 A8MWP4 228 aa11.63□□□□□ -0.55
TNFRSF8-204ENST00000479933 LINC01558Q9Y6Z2 57 aa11.63□□□□□ -0.55
TNFRSF8-204ENST00000479933 STARD9Q9P2P6 4700 aa11.63□□□□□ -0.55
TNFRSF8-204ENST00000479933 IGLV5-52A0A0A0MRZ9 124 aa11.62□□□□□ -0.55
TNFRSF8-204ENST00000479933 C1orf134Q5TEV5 83 aa11.62□□□□□ -0.55
TNFRSF8-204ENST00000479933 CASC2Q6XLA1 102 aa11.6□□□□□ -0.55
TNFRSF8-204ENST00000479933 PSORS1C2Q9UIG4 136 aa11.6□□□□□ -0.55
TNFRSF8-204ENST00000479933 MOBPQ13875 183 aa11.59□□□□□ -0.55
TNFRSF8-204ENST00000479933 IGLV9-49A0A0B4J1Y8 123 aa11.58□□□□□ -0.56
TNFRSF8-204ENST00000479933 PRKDCP78527 4128 aaKnown RBP11.56□□□□□ -0.56
TNFRSF8-204ENST00000479933 ZNF861PO60384 105 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 210.3 ms