RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 ANAPC13Q9BS18 74 aa8.85□□□□□ -0.99
CLDN18-203ENST00000479660 KMT2CQ8NEZ4 4911 aaKnown RBP8.85□□□□□ -0.99
CLDN18-203ENST00000479660 SCXQ7RTU7 201 aa8.85□□□□□ -0.99
CLDN18-203ENST00000479660 LINC00643Q86TS7 51 aa8.84□□□□□ -0.99
CLDN18-203ENST00000479660 RYR2Q92736 4967 aa8.83□□□□□ -1
CLDN18-203ENST00000479660 F8WEM9 126 aa8.82□□□□□ -1
CLDN18-203ENST00000479660 HAMPP81172 84 aa8.82□□□□□ -1
CLDN18-203ENST00000479660 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
CLDN18-203ENST00000479660 ZNF861PO60384 105 aa8.81□□□□□ -1
CLDN18-203ENST00000479660 SPRR1BP22528 89 aa8.81□□□□□ -1
CLDN18-203ENST00000479660 PKHD1P08F94 4074 aa8.8□□□□□ -1
CLDN18-203ENST00000479660 UBL5Q9BZL1 73 aa8.8□□□□□ -1
CLDN18-203ENST00000479660 LRP1BQ9NZR2 4599 aa8.78□□□□□ -1
CLDN18-203ENST00000479660 IGLV7-43P04211 117 aa8.78□□□□□ -1
CLDN18-203ENST00000479660 Q6Q795 121 aa8.78□□□□□ -1
CLDN18-203ENST00000479660 SS18L2Q9UHA2 77 aa8.78□□□□□ -1
CLDN18-203ENST00000479660 SPRR4Q96PI1 79 aa8.76□□□□□ -1.01
CLDN18-203ENST00000479660 IGLV8-61A0A075B6I0 122 aa8.76□□□□□ -1.01
CLDN18-203ENST00000479660 A0A1B0GVY2 172 aa8.76□□□□□ -1.01
CLDN18-203ENST00000479660 A0A1W2PNM2 257 aa8.75□□□□□ -1.01
CLDN18-203ENST00000479660 ZNF706Q9Y5V0 76 aaPredicted RBP8.75□□□□□ -1.01
CLDN18-203ENST00000479660 TRBV7-7A0A0K0K1E9 115 aa8.75□□□□□ -1.01
CLDN18-203ENST00000479660 IGKV3D-7A0A0C4DH55 119 aa8.74□□□□□ -1.01
CLDN18-203ENST00000479660 Q6JHZ5 121 aa8.74□□□□□ -1.01
CLDN18-203ENST00000479660 IGFL1Q6UW32 110 aa8.74□□□□□ -1.01
CLDN18-203ENST00000479660 Q8NBF4 154 aa8.74□□□□□ -1.01
CLDN18-203ENST00000479660 Q6ZVQ6 151 aa8.73□□□□□ -1.01
CLDN18-203ENST00000479660 DYNC1H1Q14204 4646 aaKnown RBP8.73□□□□□ -1.01
CLDN18-203ENST00000479660 A0A0G2JQZ4 141 aa8.73□□□□□ -1.01
CLDN18-203ENST00000479660 LINC00483Q53H64 154 aa8.73□□□□□ -1.01
CLDN18-203ENST00000479660 IMUPQ9GZP8 106 aa8.72□□□□□ -1.01
CLDN18-203ENST00000479660 A0A1B0GW54 56 aa8.71□□□□□ -1.01
CLDN18-203ENST00000479660 CCDC179H3BU77 68 aa8.7□□□□□ -1.02
CLDN18-203ENST00000479660 C5orf47Q569G3 176 aa8.7□□□□□ -1.02
CLDN18-203ENST00000479660 ATP5EP2Q5VTU8 51 aa8.7□□□□□ -1.02
CLDN18-203ENST00000479660 VPS13BQ7Z7G8 4022 aa8.69□□□□□ -1.02
CLDN18-203ENST00000479660 IGLV9-49A0A0B4J1Y8 123 aa8.69□□□□□ -1.02
CLDN18-203ENST00000479660 CRYGAP11844 174 aa8.69□□□□□ -1.02
CLDN18-203ENST00000479660 NREPQ16612 68 aa8.68□□□□□ -1.02
CLDN18-203ENST00000479660 ANAPC11Q9NYG5 84 aa8.68□□□□□ -1.02
CLDN18-203ENST00000479660 C9orf153Q5TBE3 101 aa8.67□□□□□ -1.02
CLDN18-203ENST00000479660 SMIM20Q8N5G0 67 aa8.67□□□□□ -1.02
CLDN18-203ENST00000479660 HIST1H4AP62805 103 aaKnown RBP8.64□□□□□ -1.03
CLDN18-203ENST00000479660 CXCL6P80162 114 aa8.64□□□□□ -1.03
CLDN18-203ENST00000479660 RYR3Q15413 4870 aa8.64□□□□□ -1.03
CLDN18-203ENST00000479660 A0A087WSZ3 146 aa8.63□□□□□ -1.03
CLDN18-203ENST00000479660 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
CLDN18-203ENST00000479660 MOBPQ13875 183 aa8.62□□□□□ -1.03
CLDN18-203ENST00000479660 APOBP04114 4563 aaKnown RBP8.62□□□□□ -1.03
CLDN18-203ENST00000479660 A0A087WVE0 104 aa8.61□□□□□ -1.03
CLDN18-203ENST00000479660 FAM236AA0A1B0GUQ0 79 aa8.6□□□□□ -1.03
CLDN18-203ENST00000479660 FAM236BA0A1B0GV22 79 aa8.6□□□□□ -1.03
CLDN18-203ENST00000479660 BPY2O14599 106 aa8.59□□□□□ -1.03
CLDN18-203ENST00000479660 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
CLDN18-203ENST00000479660 HRCT1Q6UXD1 115 aa8.56□□□□□ -1.04
CLDN18-203ENST00000479660 FAT1Q14517 4588 aa8.55□□□□□ -1.04
CLDN18-203ENST00000479660 Q8N9L7 120 aa8.54□□□□□ -1.04
CLDN18-203ENST00000479660 A0A087X002 238 aa8.53□□□□□ -1.04
CLDN18-203ENST00000479660 KRTAP1-4P0C5Y4 121 aa8.52□□□□□ -1.05
CLDN18-203ENST00000479660 DEFB116Q30KQ4 102 aa8.52□□□□□ -1.05
CLDN18-203ENST00000479660 FAM229BQ4G0N7 80 aa8.52□□□□□ -1.05
CLDN18-203ENST00000479660 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.05
CLDN18-203ENST00000479660 SSBP3-AS1Q7Z2R9 100 aa8.52□□□□□ -1.05
CLDN18-203ENST00000479660 IGKV4-1P06312 121 aa8.5□□□□□ -1.05
CLDN18-203ENST00000479660 DSCR10P59022 87 aa8.5□□□□□ -1.05
CLDN18-203ENST00000479660 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
CLDN18-203ENST00000479660 PLA2G1BP04054 148 aaKnown RBP8.49□□□□□ -1.05
CLDN18-203ENST00000479660 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
CLDN18-203ENST00000479660 ATOX1O00244 68 aa8.47□□□□□ -1.05
CLDN18-203ENST00000479660 UQCRQO14949 82 aa8.47□□□□□ -1.05
CLDN18-203ENST00000479660 K7EQZ3 153 aa8.46□□□□□ -1.06
CLDN18-203ENST00000479660 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.06
CLDN18-203ENST00000479660 RPS28P62857 69 aaKnown RBP8.46□□□□□ -1.06
CLDN18-203ENST00000479660 CD164Q04900 197 aa8.46□□□□□ -1.06
CLDN18-203ENST00000479660 Q96NJ1 140 aa8.42□□□□□ -1.06
CLDN18-203ENST00000479660 J3KT08 172 aa8.41□□□□□ -1.06
CLDN18-203ENST00000479660 COX7CP15954 63 aa8.41□□□□□ -1.06
CLDN18-203ENST00000479660 CDK2AP2O75956 126 aa8.41□□□□□ -1.06
CLDN18-203ENST00000479660 TYMSOSQ8TAI1 123 aa8.41□□□□□ -1.06
CLDN18-203ENST00000479660 A8MWP4 228 aa8.4□□□□□ -1.06
CLDN18-203ENST00000479660 HSPG2P98160 4391 aa8.39□□□□□ -1.07
CLDN18-203ENST00000479660 FAM229AH3BQW9 127 aa8.39□□□□□ -1.07
CLDN18-203ENST00000479660 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
CLDN18-203ENST00000479660 PRR26Q8N8Z3 221 aa8.37□□□□□ -1.07
CLDN18-203ENST00000479660 SERP2Q8N6R1 65 aa8.37□□□□□ -1.07
CLDN18-203ENST00000479660 NDUFB1O75438 58 aa8.36□□□□□ -1.07
CLDN18-203ENST00000479660 RYR1P21817 5038 aa8.36□□□□□ -1.07
CLDN18-203ENST00000479660 HCG22E2RYF7 251 aa8.36□□□□□ -1.07
CLDN18-203ENST00000479660 C4orf48Q5BLP8 95 aa8.36□□□□□ -1.07
CLDN18-203ENST00000479660 ASB16-AS1Q495Z4 193 aa8.33□□□□□ -1.08
CLDN18-203ENST00000479660 Q5VSD8 79 aa8.33□□□□□ -1.08
CLDN18-203ENST00000479660 Q5XG85 94 aa8.32□□□□□ -1.08
CLDN18-203ENST00000479660 WFDC13Q8IUB5 93 aa8.32□□□□□ -1.08
CLDN18-203ENST00000479660 TRAV7A0A075B6U4 112 aa8.32□□□□□ -1.08
CLDN18-203ENST00000479660 EPPK1P58107 5090 aaKnown RBP8.31□□□□□ -1.08
CLDN18-203ENST00000479660 SPINK1P00995 79 aa8.3□□□□□ -1.08
CLDN18-203ENST00000479660 LIMD2Q9BT23 127 aa8.3□□□□□ -1.08
CLDN18-203ENST00000479660 LINC00304Q8N9R0 145 aa8.29□□□□□ -1.08
CLDN18-203ENST00000479660 TMEM258P61165 79 aa8.29□□□□□ -1.08
CLDN18-203ENST00000479660 PKHD1L1Q86WI1 4243 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms