RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 DEFB116Q30KQ4 102 aa8.49□□□□□ -1.05
PDZRN3-208ENST00000479530 ZCCHC13Q8WW36 166 aaKnown RBP8.49□□□□□ -1.05
PDZRN3-208ENST00000479530 SPRR4Q96PI1 79 aa8.49□□□□□ -1.05
PDZRN3-208ENST00000479530 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.48□□□□□ -1.05
PDZRN3-208ENST00000479530 SPRR1AP35321 89 aa8.48□□□□□ -1.05
PDZRN3-208ENST00000479530 K7EIL1 84 aa8.46□□□□□ -1.06
PDZRN3-208ENST00000479530 UBE2BP63146 152 aa8.45□□□□□ -1.06
PDZRN3-208ENST00000479530 A0A1B0GW54 56 aa8.44□□□□□ -1.06
PDZRN3-208ENST00000479530 TLX1NBP0CAT3 122 aa8.44□□□□□ -1.06
PDZRN3-208ENST00000479530 DNAH7Q8WXX0 4024 aa8.44□□□□□ -1.06
PDZRN3-208ENST00000479530 LINC00476Q8WZB0 136 aa8.44□□□□□ -1.06
PDZRN3-208ENST00000479530 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
PDZRN3-208ENST00000479530 HCG22E2RYF7 251 aa8.43□□□□□ -1.06
PDZRN3-208ENST00000479530 PSCAO43653 123 aa8.42□□□□□ -1.06
PDZRN3-208ENST00000479530 MRPL55Q7Z7F7 128 aaKnown RBP8.42□□□□□ -1.06
PDZRN3-208ENST00000479530 Q1T7F1 81 aa8.42□□□□□ -1.06
PDZRN3-208ENST00000479530 IGLV5-37A0A075B6J1 123 aa8.41□□□□□ -1.06
PDZRN3-208ENST00000479530 PSPHP1O15172 72 aa8.41□□□□□ -1.06
PDZRN3-208ENST00000479530 WFDC13Q8IUB5 93 aa8.41□□□□□ -1.06
PDZRN3-208ENST00000479530 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
PDZRN3-208ENST00000479530 IGFL1Q6UW32 110 aa8.4□□□□□ -1.06
PDZRN3-208ENST00000479530 RPL37AP61513 92 aaKnown RBP8.39□□□□□ -1.07
PDZRN3-208ENST00000479530 PRLHP81277 87 aa8.38□□□□□ -1.07
PDZRN3-208ENST00000479530 A0A087WSZ3 146 aa8.37□□□□□ -1.07
PDZRN3-208ENST00000479530 REG3GQ6UW15 175 aa8.37□□□□□ -1.07
PDZRN3-208ENST00000479530 TRAV22A0A0B4J277 110 aa8.37□□□□□ -1.07
PDZRN3-208ENST00000479530 PLECQ15149 4684 aaKnown RBP8.36□□□□□ -1.07
PDZRN3-208ENST00000479530 IGKV2-24A0A0C4DH68 120 aa8.35□□□□□ -1.07
PDZRN3-208ENST00000479530 CYP4F30PQ9H0H9 118 aa8.35□□□□□ -1.07
PDZRN3-208ENST00000479530 A8MU10 97 aa8.33□□□□□ -1.08
PDZRN3-208ENST00000479530 LINC00208Q96KT6 92 aa8.33□□□□□ -1.08
PDZRN3-208ENST00000479530 A0A096LNI7 61 aa8.32□□□□□ -1.08
PDZRN3-208ENST00000479530 RBM12B-AS1Q9P1G2 102 aa8.32□□□□□ -1.08
PDZRN3-208ENST00000479530 A8MUN3 132 aa8.31□□□□□ -1.08
PDZRN3-208ENST00000479530 KRTAP29-1A8MX34 341 aaPredicted RBP8.3□□□□□ -1.08
PDZRN3-208ENST00000479530 KRTAP11-1Q8IUC1 163 aa8.3□□□□□ -1.08
PDZRN3-208ENST00000479530 CHTF8P0CG12 524 aa8.29□□□□□ -1.08
PDZRN3-208ENST00000479530 MP68P56378 58 aa8.29□□□□□ -1.08
PDZRN3-208ENST00000479530 KTN1-AS1Q86SY8 53 aa8.28□□□□□ -1.08
PDZRN3-208ENST00000479530 NDUFB1O75438 58 aa8.27□□□□□ -1.08
PDZRN3-208ENST00000479530 B9D2Q9BPU9 175 aa8.27□□□□□ -1.09
PDZRN3-208ENST00000479530 CNBPP62633 177 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-208ENST00000479530 DYNC2H1Q8NCM8 4307 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-208ENST00000479530 IGLV8-61A0A075B6I0 122 aa8.26□□□□□ -1.09
PDZRN3-208ENST00000479530 H0Y9P7 68 aa8.26□□□□□ -1.09
PDZRN3-208ENST00000479530 CASC2Q6XLA1 102 aa8.25□□□□□ -1.09
PDZRN3-208ENST00000479530 UBE2AP49459 152 aa8.25□□□□□ -1.09
PDZRN3-208ENST00000479530 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
PDZRN3-208ENST00000479530 Q5VV11 94 aa8.24□□□□□ -1.09
PDZRN3-208ENST00000479530 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
PDZRN3-208ENST00000479530 APLNQ9ULZ1 77 aa8.23□□□□□ -1.09
PDZRN3-208ENST00000479530 C16orf90A8MZG2 172 aa8.22□□□□□ -1.09
PDZRN3-208ENST00000479530 UBE2DNLQ8IWF7 75 aa8.22□□□□□ -1.09
PDZRN3-208ENST00000479530 STARD9Q9P2P6 4700 aa8.22□□□□□ -1.09
PDZRN3-208ENST00000479530 MDFIQ99750 246 aa8.22□□□□□ -1.09
PDZRN3-208ENST00000479530 LINC00472Q9H8W2 130 aa8.21□□□□□ -1.1
PDZRN3-208ENST00000479530 PANO1I0J062 215 aa8.2□□□□□ -1.1
PDZRN3-208ENST00000479530 Q8N9P0 234 aaPredicted RBP8.2□□□□□ -1.1
PDZRN3-208ENST00000479530 PRKDCP78527 4128 aaKnown RBP8.19□□□□□ -1.1
PDZRN3-208ENST00000479530 A8MWP4 228 aa8.19□□□□□ -1.1
PDZRN3-208ENST00000479530 C9orf163Q8N9P6 203 aa8.18□□□□□ -1.1
PDZRN3-208ENST00000479530 SPANXA2-OT1Q8N9U9 137 aa8.18□□□□□ -1.1
PDZRN3-208ENST00000479530 KMT2AQ03164 3969 aa8.16□□□□□ -1.1
PDZRN3-208ENST00000479530 H0Y9J4 135 aa8.16□□□□□ -1.1
PDZRN3-208ENST00000479530 CHKB-CPT1BH3BT56 60 aa8.16□□□□□ -1.1
PDZRN3-208ENST00000479530 SPTSSBQ8NFR3 76 aa8.16□□□□□ -1.1
PDZRN3-208ENST00000479530 PRR15LQ9BU68 103 aa8.16□□□□□ -1.1
PDZRN3-208ENST00000479530 NDUFS5O43920 106 aa8.15□□□□□ -1.11
PDZRN3-208ENST00000479530 MMP24-AS1A0A0U1RRL7 71 aa8.14□□□□□ -1.11
PDZRN3-208ENST00000479530 FRAS1Q86XX4 4008 aa8.14□□□□□ -1.11
PDZRN3-208ENST00000479530 VPS13DQ5THJ4 4388 aa8.13□□□□□ -1.11
PDZRN3-208ENST00000479530 H3BPC8 53 aa8.13□□□□□ -1.11
PDZRN3-208ENST00000479530 ATP11AUNQ6ZP68 121 aa8.13□□□□□ -1.11
PDZRN3-208ENST00000479530 SPRR1BP22528 89 aa8.12□□□□□ -1.11
PDZRN3-208ENST00000479530 DNAH2Q9P225 4427 aa8.12□□□□□ -1.11
PDZRN3-208ENST00000479530 PCOTHQ58A44 107 aa8.12□□□□□ -1.11
PDZRN3-208ENST00000479530 COA5Q86WW8 74 aa8.11□□□□□ -1.11
PDZRN3-208ENST00000479530 A6NN06 94 aa8.11□□□□□ -1.11
PDZRN3-208ENST00000479530 LCA10Q71F78 164 aa8.1□□□□□ -1.11
PDZRN3-208ENST00000479530 LIMD2Q9BT23 127 aa8.1□□□□□ -1.11
PDZRN3-208ENST00000479530 HECTD4Q9Y4D8 3996 aa8.1□□□□□ -1.11
PDZRN3-208ENST00000479530 NBDYA0A0U1RRE5 68 aa8.1□□□□□ -1.11
PDZRN3-208ENST00000479530 Q6ZRN7 208 aaPredicted RBP8.1□□□□□ -1.11
PDZRN3-208ENST00000479530 DNHD1Q96M86 4753 aa8.09□□□□□ -1.11
PDZRN3-208ENST00000479530 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.08□□□□□ -1.12
PDZRN3-208ENST00000479530 MEGF8Q7Z7M0 2845 aa8.08□□□□□ -1.12
PDZRN3-208ENST00000479530 IGLV7-46A0A075B6I9 117 aa8.08□□□□□ -1.12
PDZRN3-208ENST00000479530 Q96NJ1 140 aa8.07□□□□□ -1.12
PDZRN3-208ENST00000479530 TGP01266 2768 aa8.07□□□□□ -1.12
PDZRN3-208ENST00000479530 DNAH8Q96JB1 4490 aa8.06□□□□□ -1.12
PDZRN3-208ENST00000479530 IGLV9-49A0A0B4J1Y8 123 aa8.05□□□□□ -1.12
PDZRN3-208ENST00000479530 C14orf177Q52M58 125 aa8.05□□□□□ -1.12
PDZRN3-208ENST00000479530 C8orf87E5RJ46 101 aa8.05□□□□□ -1.12
PDZRN3-208ENST00000479530 A6NED7 52 aa8.04□□□□□ -1.12
PDZRN3-208ENST00000479530 Q75L30 129 aa8.04□□□□□ -1.12
PDZRN3-208ENST00000479530 DNAH17Q9UFH2 4485 aa8.03□□□□□ -1.12
PDZRN3-208ENST00000479530 C7orf65Q6ZTY9 151 aa8.03□□□□□ -1.12
PDZRN3-208ENST00000479530 SPAG11AQ6PDA7 123 aa8.03□□□□□ -1.12
PDZRN3-208ENST00000479530 LOC101927531A0A1B0GV80 90 aa8.02□□□□□ -1.13
PDZRN3-208ENST00000479530 KRTAP13-1Q8IUC0 172 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms