RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 KRTAP1-4P0C5Y4 121 aa10.71□□□□□ -0.69
HLA-A-206ENST00000479320 ZNF861PO60384 105 aa10.7□□□□□ -0.7
HLA-A-206ENST00000479320 BCE1O60756 84 aa10.7□□□□□ -0.7
HLA-A-206ENST00000479320 DNAL4O96015 105 aa10.69□□□□□ -0.7
HLA-A-206ENST00000479320 ZNF625Q96I27 306 aaPredicted RBP10.69□□□□□ -0.7
HLA-A-206ENST00000479320 LINC00167Q96N53 147 aa10.69□□□□□ -0.7
HLA-A-206ENST00000479320 IGLV1-50A0A075B6I6 118 aa10.68□□□□□ -0.7
HLA-A-206ENST00000479320 RPL37AP8A6NKH3 93 aa10.67□□□□□ -0.7
HLA-A-206ENST00000479320 PFN2P35080 140 aa10.67□□□□□ -0.7
HLA-A-206ENST00000479320 IGLV5-37A0A075B6J1 123 aa10.66□□□□□ -0.7
HLA-A-206ENST00000479320 NDUFC2O95298 119 aa10.65□□□□□ -0.7
HLA-A-206ENST00000479320 TRBV10-3A0A0K0K1G6 114 aa10.63□□□□□ -0.71
HLA-A-206ENST00000479320 NKAPP1Q8N9T2 125 aa10.63□□□□□ -0.71
HLA-A-206ENST00000479320 NPC2P61916 151 aa10.62□□□□□ -0.71
HLA-A-206ENST00000479320 COX17Q14061 63 aa10.61□□□□□ -0.71
HLA-A-206ENST00000479320 SOSTDC1Q6X4U4 206 aa10.61□□□□□ -0.71
HLA-A-206ENST00000479320 SND1-IT1Q9HBX3 110 aa10.61□□□□□ -0.71
HLA-A-206ENST00000479320 hADV29S1A0JD25 119 aa10.6□□□□□ -0.71
HLA-A-206ENST00000479320 RNF213Q63HN8 5207 aa10.59□□□□□ -0.71
HLA-A-206ENST00000479320 VPREB1P12018 145 aa10.58□□□□□ -0.71
HLA-A-206ENST00000479320 IGKV2-28A0A075B6P5 120 aa10.58□□□□□ -0.72
HLA-A-206ENST00000479320 JMJD7-PLA2G4BH0Y9G9 81 aa10.58□□□□□ -0.72
HLA-A-206ENST00000479320 IGKV2D-28P01615 120 aa10.58□□□□□ -0.72
HLA-A-206ENST00000479320 KRTAP13-1Q8IUC0 172 aa10.57□□□□□ -0.72
HLA-A-206ENST00000479320 FAM218AQ96MZ4 157 aa10.57□□□□□ -0.72
HLA-A-206ENST00000479320 Q8NDZ9 215 aa10.56□□□□□ -0.72
HLA-A-206ENST00000479320 UBE2AP49459 152 aa10.55□□□□□ -0.72
HLA-A-206ENST00000479320 LPAP08519 4548 aa10.54□□□□□ -0.72
HLA-A-206ENST00000479320 CCKP06307 115 aa10.54□□□□□ -0.72
HLA-A-206ENST00000479320 LINC00158P58513 81 aa10.54□□□□□ -0.72
HLA-A-206ENST00000479320 A0A087X002 238 aa10.53□□□□□ -0.72
HLA-A-206ENST00000479320 ORMDL1Q9P0S3 153 aa10.53□□□□□ -0.72
HLA-A-206ENST00000479320 A0A0U1RRA0 63 aa10.52□□□□□ -0.73
HLA-A-206ENST00000479320 H3BQ85 93 aa10.52□□□□□ -0.73
HLA-A-206ENST00000479320 LINC00846Q9NV44 126 aa10.51□□□□□ -0.73
HLA-A-206ENST00000479320 ANAPC11Q9NYG5 84 aa10.51□□□□□ -0.73
HLA-A-206ENST00000479320 PRLHP81277 87 aa10.5□□□□□ -0.73
HLA-A-206ENST00000479320 LINC00337Q8N6G1 96 aa10.5□□□□□ -0.73
HLA-A-206ENST00000479320 SMIM11BQ8TCY0 68 aa10.5□□□□□ -0.73
HLA-A-206ENST00000479320 M0R378 163 aa10.49□□□□□ -0.73
HLA-A-206ENST00000479320 FAM19A1Q7Z5A9 133 aa10.49□□□□□ -0.73
HLA-A-206ENST00000479320 TYMSOSQ8TAI1 123 aa10.48□□□□□ -0.73
HLA-A-206ENST00000479320 C14orf132Q9NPU4 83 aa10.48□□□□□ -0.73
HLA-A-206ENST00000479320 SERP1Q9Y6X1 66 aa10.48□□□□□ -0.73
HLA-A-206ENST00000479320 MIR7-3HGQ8N6C7 128 aa10.47□□□□□ -0.73
HLA-A-206ENST00000479320 IGKV3D-7A0A0C4DH55 119 aa10.46□□□□□ -0.73
HLA-A-206ENST00000479320 TMEM256-PLSCR3K7ERE1 68 aa10.46□□□□□ -0.73
HLA-A-206ENST00000479320 ATP5EP56381 51 aaPredicted RBP10.46□□□□□ -0.73
HLA-A-206ENST00000479320 KRTAP13-2Q52LG2 175 aa10.45□□□□□ -0.74
HLA-A-206ENST00000479320 TRAV7A0A075B6U4 112 aa10.44□□□□□ -0.74
HLA-A-206ENST00000479320 PRR4Q16378 134 aa10.44□□□□□ -0.74
HLA-A-206ENST00000479320 FAM229BQ4G0N7 80 aa10.44□□□□□ -0.74
HLA-A-206ENST00000479320 Q5XG85 94 aa10.44□□□□□ -0.74
HLA-A-206ENST00000479320 UBL5Q9BZL1 73 aa10.44□□□□□ -0.74
HLA-A-206ENST00000479320 NDUFC1O43677 76 aa10.43□□□□□ -0.74
HLA-A-206ENST00000479320 GHRHP01286 108 aa10.43□□□□□ -0.74
HLA-A-206ENST00000479320 PDE6GP18545 87 aa10.43□□□□□ -0.74
HLA-A-206ENST00000479320 FAM236DA0A1B0GTK5 79 aa10.42□□□□□ -0.74
HLA-A-206ENST00000479320 FAM236CP0DP71 79 aa10.42□□□□□ -0.74
HLA-A-206ENST00000479320 NCR3O14931 201 aa10.39□□□□□ -0.75
HLA-A-206ENST00000479320 DSCR8Q96T75 97 aa10.39□□□□□ -0.75
HLA-A-206ENST00000479320 HIGD2AQ9BW72 106 aa10.39□□□□□ -0.75
HLA-A-206ENST00000479320 CYSTM1Q9H1C7 97 aa10.39□□□□□ -0.75
HLA-A-206ENST00000479320 LOC110117498A0A087WWA1 95 aa10.38□□□□□ -0.75
HLA-A-206ENST00000479320 KLKP1Q107X0 134 aa10.38□□□□□ -0.75
HLA-A-206ENST00000479320 PRO0628Q9UI54 55 aa10.38□□□□□ -0.75
HLA-A-206ENST00000479320 PRYO14603 147 aa10.36□□□□□ -0.75
HLA-A-206ENST00000479320 KCNQ1DNQ9H478 68 aa10.36□□□□□ -0.75
HLA-A-206ENST00000479320 A0A087WVE0 104 aa10.35□□□□□ -0.75
HLA-A-206ENST00000479320 SMIM26A0A096LP01 95 aa10.35□□□□□ -0.75
HLA-A-206ENST00000479320 SPRR1AP35321 89 aa10.35□□□□□ -0.75
HLA-A-206ENST00000479320 LINC00304Q8N9R0 145 aa10.35□□□□□ -0.75
HLA-A-206ENST00000479320 CXCL6P80162 114 aa10.33□□□□□ -0.76
HLA-A-206ENST00000479320 SPRR4Q96PI1 79 aa10.33□□□□□ -0.76
HLA-A-206ENST00000479320 KRTAP4-16G5E9R7 235 aaPredicted RBP10.33□□□□□ -0.76
HLA-A-206ENST00000479320 ERC2-IT1O76042 136 aa10.32□□□□□ -0.76
HLA-A-206ENST00000479320 C4orf26Q17RF5 130 aa10.32□□□□□ -0.76
HLA-A-206ENST00000479320 ETDCA0A1B0GVM5 59 aa10.31□□□□□ -0.76
HLA-A-206ENST00000479320 HRCT1Q6UXD1 115 aa10.31□□□□□ -0.76
HLA-A-206ENST00000479320 H7BZZ5 65 aa10.3□□□□□ -0.76
HLA-A-206ENST00000479320 ZNF706Q9Y5V0 76 aaPredicted RBP10.3□□□□□ -0.76
HLA-A-206ENST00000479320 C20orf197Q8N268 126 aa10.29□□□□□ -0.76
HLA-A-206ENST00000479320 RETNLBQ9BQ08 111 aa10.29□□□□□ -0.76
HLA-A-206ENST00000479320 TRAV23DV6A0A075B6W5 121 aa10.28□□□□□ -0.76
HLA-A-206ENST00000479320 Q6ZQT0 140 aa10.28□□□□□ -0.76
HLA-A-206ENST00000479320 RBM3P98179 157 aaKnown RBP10.27□□□□□ -0.77
HLA-A-206ENST00000479320 LINC00575Q6W349 94 aa10.24□□□□□ -0.77
HLA-A-206ENST00000479320 IGLV6-57P01721 117 aa10.23□□□□□ -0.77
HLA-A-206ENST00000479320 SPAG11AQ6PDA7 123 aa10.23□□□□□ -0.77
HLA-A-206ENST00000479320 MUC2Q02817 5179 aa10.22□□□□□ -0.77
HLA-A-206ENST00000479320 LINC01547P58512 204 aaPredicted RBP10.22□□□□□ -0.77
HLA-A-206ENST00000479320 LINC00483Q53H64 154 aa10.21□□□□□ -0.78
HLA-A-206ENST00000479320 Q9BRP9 147 aa10.21□□□□□ -0.78
HLA-A-206ENST00000479320 Q6ZRX8 168 aa10.2□□□□□ -0.78
HLA-A-206ENST00000479320 IGLV7-46A0A075B6I9 117 aa10.18□□□□□ -0.78
HLA-A-206ENST00000479320 TRBV7-6A0A0J9YX20 115 aa10.18□□□□□ -0.78
HLA-A-206ENST00000479320 C4orf48Q5BLP8 95 aa10.18□□□□□ -0.78
HLA-A-206ENST00000479320 Q6ZVQ6 151 aa10.18□□□□□ -0.78
HLA-A-206ENST00000479320 Q8NBF4 154 aa10.18□□□□□ -0.78
HLA-A-206ENST00000479320 TPRXLQ17RH7 258 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms