RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 FAT1Q14517 4588 aa4.09□□□□□ -1.75
USP48-208ENST00000479177 BIRC6Q9NR09 4857 aa4.09□□□□□ -1.76
USP48-208ENST00000479177 VPS13BQ7Z7G8 4022 aa4.08□□□□□ -1.76
USP48-208ENST00000479177 TRACP01848 142 aa4.08□□□□□ -1.76
USP48-208ENST00000479177 ATXN8Q156A1 80 aa4.08□□□□□ -1.76
USP48-208ENST00000479177 LINC00575Q6W349 94 aa4.08□□□□□ -1.76
USP48-208ENST00000479177 FAM19A1Q7Z5A9 133 aa4.08□□□□□ -1.76
USP48-208ENST00000479177 KRTAP13-1Q8IUC0 172 aa4.08□□□□□ -1.76
USP48-208ENST00000479177 KIAA1109Q2LD37 5005 aa4.07□□□□□ -1.76
USP48-208ENST00000479177 A0A1B0GX51 115 aa4.07□□□□□ -1.76
USP48-208ENST00000479177 H0Y9J4 135 aa4.07□□□□□ -1.76
USP48-208ENST00000479177 PRLHP81277 87 aa4.07□□□□□ -1.76
USP48-208ENST00000479177 SMCR5Q8TEV8 140 aa4.07□□□□□ -1.76
USP48-208ENST00000479177 Q9BRP9 147 aa4.07□□□□□ -1.76
USP48-208ENST00000479177 hADV29S1A0JD25 119 aa4.06□□□□□ -1.76
USP48-208ENST00000479177 H3BMG7 143 aa4.06□□□□□ -1.76
USP48-208ENST00000479177 SLC25A20O43772 301 aa4.06□□□□□ -1.76
USP48-208ENST00000479177 CDK2AP2O75956 126 aa4.06□□□□□ -1.76
USP48-208ENST00000479177 INAFM2P0DMQ5 153 aa4.06□□□□□ -1.76
USP48-208ENST00000479177 UBE2AP49459 152 aa4.06□□□□□ -1.76
USP48-208ENST00000479177 C1orf137Q5JT78 98 aa4.06□□□□□ -1.76
USP48-208ENST00000479177 GTF2H5Q6ZYL4 71 aa4.06□□□□□ -1.76
USP48-208ENST00000479177 DHRS4-AS1Q9P1J3 65 aa4.06□□□□□ -1.76
USP48-208ENST00000479177 ERC2-IT1O76042 136 aa4.05□□□□□ -1.76
USP48-208ENST00000479177 PRO0461Q9UI25 63 aa4.05□□□□□ -1.76
USP48-208ENST00000479177 PKHD1L1Q86WI1 4243 aa4.04□□□□□ -1.76
USP48-208ENST00000479177 C9JAW5 83 aa4.04□□□□□ -1.76
USP48-208ENST00000479177 DNAL4O96015 105 aa4.04□□□□□ -1.76
USP48-208ENST00000479177 IGLV7-43P04211 117 aa4.04□□□□□ -1.76
USP48-208ENST00000479177 RPL37AP61513 92 aaKnown RBP4.04□□□□□ -1.76
USP48-208ENST00000479177 UBE2V1Q13404 147 aa4.04□□□□□ -1.76
USP48-208ENST00000479177 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.04□□□□□ -1.76
USP48-208ENST00000479177 Q6ZQY7 126 aa4.04□□□□□ -1.76
USP48-208ENST00000479177 MTURNQ8N3F0 131 aa4.04□□□□□ -1.76
USP48-208ENST00000479177 HIGD2AQ9BW72 106 aa4.04□□□□□ -1.76
USP48-208ENST00000479177 ZNF861PO60384 105 aa4.03□□□□□ -1.76
USP48-208ENST00000479177 SNCGO76070 127 aa4.03□□□□□ -1.76
USP48-208ENST00000479177 SMR3BP02814 79 aaPredicted RBP4.03□□□□□ -1.76
USP48-208ENST00000479177 KRTAP10-4P60372 401 aaPredicted RBP4.03□□□□□ -1.76
USP48-208ENST00000479177 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
USP48-208ENST00000479177 ORMDL1Q9P0S3 153 aa4.03□□□□□ -1.76
USP48-208ENST00000479177 IGLV5-48A0A075B6I7 105 aa4.02□□□□□ -1.77
USP48-208ENST00000479177 H3BT86 120 aa4.02□□□□□ -1.77
USP48-208ENST00000479177 LINC01547P58512 204 aaPredicted RBP4.02□□□□□ -1.77
USP48-208ENST00000479177 ST20-AS1Q8NBB2 130 aa4.02□□□□□ -1.77
USP48-208ENST00000479177 LINC01600Q96MT4 127 aa4.02□□□□□ -1.77
USP48-208ENST00000479177 BAALC-AS2P0C853 105 aa4.01□□□□□ -1.77
USP48-208ENST00000479177 OCIAD2Q56VL3 154 aa4.01□□□□□ -1.77
USP48-208ENST00000479177 F8W1H4 67 aa4□□□□□ -1.77
USP48-208ENST00000479177 H3BQ85 93 aa4□□□□□ -1.77
USP48-208ENST00000479177 ANKRD29Q8N6D5 301 aa4□□□□□ -1.77
USP48-208ENST00000479177 PPDPFLQ8WWR9 84 aa4□□□□□ -1.77
USP48-208ENST00000479177 SPRR4Q96PI1 79 aa4□□□□□ -1.77
USP48-208ENST00000479177 ZNF706Q9Y5V0 76 aaPredicted RBP4□□□□□ -1.77
USP48-208ENST00000479177 SPRR1BP22528 89 aa3.99□□□□□ -1.77
USP48-208ENST00000479177 LINC00483Q53H64 154 aa3.99□□□□□ -1.77
USP48-208ENST00000479177 Q8N377 158 aa3.99□□□□□ -1.77
USP48-208ENST00000479177 FLG2Q5D862 2391 aaPredicted RBP3.99□□□□□ -1.77
USP48-208ENST00000479177 HERC2O95714 4834 aa3.99□□□□□ -1.77
USP48-208ENST00000479177 TEX49A0A1B0GTD5 131 aa3.98□□□□□ -1.77
USP48-208ENST00000479177 TMEM256-PLSCR3K7ERE1 68 aa3.98□□□□□ -1.77
USP48-208ENST00000479177 Q5VSD8 79 aa3.98□□□□□ -1.77
USP48-208ENST00000479177 GAGE2AQ6NT46 116 aa3.98□□□□□ -1.77
USP48-208ENST00000479177 DEFB105AQ8NG35 78 aa3.98□□□□□ -1.77
USP48-208ENST00000479177 SPINK6Q6UWN8 80 aa3.97□□□□□ -1.77
USP48-208ENST00000479177 SMIM29Q86T20 159 aa3.97□□□□□ -1.77
USP48-208ENST00000479177 C3orf22Q8N5N4 141 aa3.97□□□□□ -1.77
USP48-208ENST00000479177 OBSCN-AS1Q96MR7 158 aa3.97□□□□□ -1.77
USP48-208ENST00000479177 KRTAP1-4P0C5Y4 121 aa3.96□□□□□ -1.78
USP48-208ENST00000479177 NDUFV3P56181 108 aaKnown RBP3.96□□□□□ -1.78
USP48-208ENST00000479177 ETDBQ3ZM63 59 aa3.96□□□□□ -1.78
USP48-208ENST00000479177 TEN1Q86WV5 123 aa3.96□□□□□ -1.78
USP48-208ENST00000479177 A0A1B0GV72 72 aa3.95□□□□□ -1.78
USP48-208ENST00000479177 ANAPC11Q9NYG5 84 aa3.95□□□□□ -1.78
USP48-208ENST00000479177 LAMTOR3Q9UHA4 124 aa3.95□□□□□ -1.78
USP48-208ENST00000479177 IGLV8-61A0A075B6I0 122 aa3.94□□□□□ -1.78
USP48-208ENST00000479177 F8WEM9 126 aa3.94□□□□□ -1.78
USP48-208ENST00000479177 JMJD7-PLA2G4BH0Y9G9 81 aa3.94□□□□□ -1.78
USP48-208ENST00000479177 FAM229BQ4G0N7 80 aa3.94□□□□□ -1.78
USP48-208ENST00000479177 RBM3P98179 157 aaKnown RBP3.93□□□□□ -1.78
USP48-208ENST00000479177 C14orf132Q9NPU4 83 aa3.93□□□□□ -1.78
USP48-208ENST00000479177 MYCBP2O75592 4640 aa3.92□□□□□ -1.78
USP48-208ENST00000479177 FAT3Q8TDW7 4589 aa3.92□□□□□ -1.78
USP48-208ENST00000479177 LOC110117498A0A087WWA1 95 aa3.92□□□□□ -1.78
USP48-208ENST00000479177 A0A087X002 238 aa3.92□□□□□ -1.78
USP48-208ENST00000479177 IGLV9-49A0A0B4J1Y8 123 aa3.92□□□□□ -1.78
USP48-208ENST00000479177 TRBV7-4A0A0J9YYF1 115 aa3.92□□□□□ -1.78
USP48-208ENST00000479177 MOBPQ13875 183 aa3.92□□□□□ -1.78
USP48-208ENST00000479177 KRTAP13-2Q52LG2 175 aa3.92□□□□□ -1.78
USP48-208ENST00000479177 C9orf153Q5TBE3 101 aa3.92□□□□□ -1.78
USP48-208ENST00000479177 Q8NBF4 154 aa3.92□□□□□ -1.78
USP48-208ENST00000479177 ABCA13Q86UQ4 5058 aa3.92□□□□□ -1.78
USP48-208ENST00000479177 LRP1Q07954 4544 aaKnown RBP3.91□□□□□ -1.78
USP48-208ENST00000479177 CRYGAP11844 174 aa3.91□□□□□ -1.78
USP48-208ENST00000479177 Q6JHZ5 121 aa3.91□□□□□ -1.78
USP48-208ENST00000479177 IGFL1Q6UW32 110 aa3.91□□□□□ -1.78
USP48-208ENST00000479177 Q6ZQT0 140 aa3.91□□□□□ -1.78
USP48-208ENST00000479177 PDE6GP18545 87 aa3.9□□□□□ -1.79
USP48-208ENST00000479177 DSCR8Q96T75 97 aa3.9□□□□□ -1.79
USP48-208ENST00000479177 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 1307.1 ms