RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 ENHOQ6UWT2 76 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 HRCT1Q6UXD1 115 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 Q6ZRU5 148 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 FAM19A1Q7Z5A9 133 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 Q8IZM0 81 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 MUC7Q8TAX7 377 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 SMIM11BQ8TCY0 68 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 AMELXQ99217 191 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 SPANXDQ9BXN6 97 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 UBL5Q9BZL1 73 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 C14orf132Q9NPU4 83 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 SPANXB1Q9NS25 103 aaPredicted RBP0.74□□□□□ -2.29
SRRM1-211ENST00000478890 SPANXCQ9NY87 97 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 RBM12B-AS1Q9P1G2 102 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 LINC00588Q9Y4M8 146 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 CDH23Q9H251 3354 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 CELSR3Q9NYQ7 3312 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 LOC400499M0QZD8 3231 aa0.74□□□□□ -2.29
SRRM1-211ENST00000478890 TRBV30A0A0K0K1B3 111 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 TRBV10-2A0A0K0K1G8 114 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 NBDYA0A0U1RRE5 68 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 TEX49A0A1B0GTD5 131 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 JMJD7-PLA2G4BH0Y9G9 81 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 H3BNG1 76 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 H3BQ85 93 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 TMEM256-PLSCR3K7ERE1 68 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 ZNF73O43830 326 aaPredicted RBP0.73□□□□□ -2.29
SRRM1-211ENST00000478890 IGLV7-43P04211 117 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 RPL28P46779 137 aaKnown RBP0.73□□□□□ -2.29
SRRM1-211ENST00000478890 RBM3P98179 157 aaKnown RBP0.73□□□□□ -2.29
SRRM1-211ENST00000478890 LINC01556Q5JQF7 62 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 Q6ZQY7 126 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 SCXQ7RTU7 201 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 TEN1Q86WV5 123 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 LINC00337Q8N6G1 96 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 LINC00474Q9P2X8 69 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 DNAH14Q0VDD8 3507 aa0.73□□□□□ -2.29
SRRM1-211ENST00000478890 USP34Q70CQ2 3546 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 DCHS1Q96JQ0 3298 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 A0A1B0GX51 115 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 H3BT86 120 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 LST1O00453 97 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 NDUFB1O75438 58 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 CCKP06307 115 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 ACYP1P07311 99 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 PDE6GP18545 87 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 MP68P56378 58 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 PRLHP81277 87 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 C1orf137Q5JT78 98 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 SPINT4Q6UDR6 99 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 SPINK6Q6UWN8 80 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 LINC00575Q6W349 94 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 SOSTDC1Q6X4U4 206 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 SDIM1Q6ZPB5 146 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 FAM19A3Q7Z5A8 133 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 KRTAP13-1Q8IUC0 172 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 Q8N814 137 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 SMCR5Q8TEV8 140 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 TM2D3Q9BRN9 247 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 C6orf48Q9UBA6 75 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 C22orf24Q9Y442 160 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 FBN3Q75N90 2809 aa0.72□□□□□ -2.29
SRRM1-211ENST00000478890 GVQW2A0A096LPI5 108 aaPredicted RBP0.71□□□□□ -2.3
SRRM1-211ENST00000478890 TRBV7-6A0A0J9YX20 115 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 FAM236AA0A1B0GUQ0 79 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 FAM236BA0A1B0GV22 79 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 C16orf90A8MZG2 172 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 C3orf84H3BNL1 204 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 NDUFC2O95298 119 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 SMR3BP02814 79 aaPredicted RBP0.71□□□□□ -2.3
SRRM1-211ENST00000478890 MT-ATP8P03928 68 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 KRTAP12-3P60328 96 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.71□□□□□ -2.3
SRRM1-211ENST00000478890 PHF5AQ7RTV0 110 aaKnown RBP0.71□□□□□ -2.3
SRRM1-211ENST00000478890 LINC00643Q86TS7 51 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 C3orf22Q8N5N4 141 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 SPANXA2-OT1Q8N9U9 137 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 ST20-AS1Q8NBB2 130 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 Q9BRP9 147 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 UPK3BQ9BT76 320 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 APLNQ9ULZ1 77 aa0.71□□□□□ -2.3
SRRM1-211ENST00000478890 COL7A1Q02388 2944 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 A0A087WTM6 91 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 A0A0G2JQZ4 141 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 A0A1W2PNN7 141 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 A8MUU9 505 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 C8orf87E5RJ46 101 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 ATOX1O00244 68 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 BCE1O60756 84 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 IGLV6-57P01721 117 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 ELOF1P60002 83 aaKnown RBP0.7□□□□□ -2.3
SRRM1-211ENST00000478890 RPL37AP61513 92 aaKnown RBP0.7□□□□□ -2.3
SRRM1-211ENST00000478890 C4orf26Q17RF5 130 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 ATP5EP2Q5VTU8 51 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 Q6JHZ5 121 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 Q6ZRX8 168 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 WFDC13Q8IUB5 93 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 SMIM20Q8N5G0 67 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 SPACA4Q8TDM5 124 aa0.7□□□□□ -2.3
SRRM1-211ENST00000478890 RETNLBQ9BQ08 111 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms