RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 MEGF8Q7Z7M0 2845 aa9.44□□□□□ -0.9
U2AF1-210ENST00000478282 PRR4Q16378 134 aa9.44□□□□□ -0.9
U2AF1-210ENST00000478282 CASC10Q5T4H9 136 aa9.44□□□□□ -0.9
U2AF1-210ENST00000478282 PRR15Q8IV56 129 aa9.44□□□□□ -0.9
U2AF1-210ENST00000478282 PRKDCP78527 4128 aaKnown RBP9.44□□□□□ -0.9
U2AF1-210ENST00000478282 NDUFB1O75438 58 aa9.43□□□□□ -0.9
U2AF1-210ENST00000478282 REG3GQ6UW15 175 aa9.43□□□□□ -0.9
U2AF1-210ENST00000478282 IGFL1Q6UW32 110 aa9.43□□□□□ -0.9
U2AF1-210ENST00000478282 A0A0G2JQZ4 141 aa9.42□□□□□ -0.9
U2AF1-210ENST00000478282 A0A1W2PNN7 141 aa9.42□□□□□ -0.9
U2AF1-210ENST00000478282 V9GYY9 64 aa9.42□□□□□ -0.9
U2AF1-210ENST00000478282 TRAV22A0A0B4J277 110 aa9.41□□□□□ -0.9
U2AF1-210ENST00000478282 WFDC13Q8IUB5 93 aa9.41□□□□□ -0.9
U2AF1-210ENST00000478282 B9D2Q9BPU9 175 aa9.41□□□□□ -0.9
U2AF1-210ENST00000478282 DEFB116Q30KQ4 102 aa9.41□□□□□ -0.9
U2AF1-210ENST00000478282 C11orf45Q8TAV5 145 aa9.4□□□□□ -0.9
U2AF1-210ENST00000478282 COL7A1Q02388 2944 aa9.4□□□□□ -0.9
U2AF1-210ENST00000478282 PSPHP1O15172 72 aa9.4□□□□□ -0.9
U2AF1-210ENST00000478282 MP68P56378 58 aa9.4□□□□□ -0.9
U2AF1-210ENST00000478282 A0A087WSZ3 146 aa9.38□□□□□ -0.91
U2AF1-210ENST00000478282 TENM3Q9P273 2699 aa9.37□□□□□ -0.91
U2AF1-210ENST00000478282 IGLV8-61A0A075B6I0 122 aa9.37□□□□□ -0.91
U2AF1-210ENST00000478282 DYNC2H1Q8NCM8 4307 aaKnown RBP9.36□□□□□ -0.91
U2AF1-210ENST00000478282 LINC00588Q9Y4M8 146 aa9.36□□□□□ -0.91
U2AF1-210ENST00000478282 KRTAP29-1A8MX34 341 aaPredicted RBP9.35□□□□□ -0.91
U2AF1-210ENST00000478282 LINC00208Q96KT6 92 aa9.35□□□□□ -0.91
U2AF1-210ENST00000478282 DNAH7Q8WXX0 4024 aa9.35□□□□□ -0.91
U2AF1-210ENST00000478282 RPL37AP61513 92 aaKnown RBP9.34□□□□□ -0.91
U2AF1-210ENST00000478282 PRLHP81277 87 aa9.33□□□□□ -0.92
U2AF1-210ENST00000478282 A8MUN3 132 aa9.32□□□□□ -0.92
U2AF1-210ENST00000478282 SPANXA2-OT1Q8N9U9 137 aa9.31□□□□□ -0.92
U2AF1-210ENST00000478282 H0Y9P7 68 aa9.31□□□□□ -0.92
U2AF1-210ENST00000478282 H3BPC8 53 aa9.31□□□□□ -0.92
U2AF1-210ENST00000478282 DNAH1Q9P2D7 4330 aa9.3□□□□□ -0.92
U2AF1-210ENST00000478282 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
U2AF1-210ENST00000478282 SEC61GP60059 68 aa9.29□□□□□ -0.92
U2AF1-210ENST00000478282 UBE2AP49459 152 aa9.28□□□□□ -0.92
U2AF1-210ENST00000478282 PMAIP1Q13794 54 aa9.28□□□□□ -0.92
U2AF1-210ENST00000478282 CNBPP62633 177 aaKnown RBP9.28□□□□□ -0.92
U2AF1-210ENST00000478282 A0A096LNI7 61 aa9.27□□□□□ -0.93
U2AF1-210ENST00000478282 Q5VV11 94 aa9.27□□□□□ -0.93
U2AF1-210ENST00000478282 IGKV2-24A0A0C4DH68 120 aa9.25□□□□□ -0.93
U2AF1-210ENST00000478282 A8MWP4 228 aa9.25□□□□□ -0.93
U2AF1-210ENST00000478282 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
U2AF1-210ENST00000478282 FBN3Q75N90 2809 aa9.25□□□□□ -0.93
U2AF1-210ENST00000478282 Q8N9P0 234 aaPredicted RBP9.24□□□□□ -0.93
U2AF1-210ENST00000478282 LINC00472Q9H8W2 130 aa9.23□□□□□ -0.93
U2AF1-210ENST00000478282 C9orf163Q8N9P6 203 aa9.23□□□□□ -0.93
U2AF1-210ENST00000478282 CSMD3Q7Z407 3707 aa9.23□□□□□ -0.93
U2AF1-210ENST00000478282 LIMD2Q9BT23 127 aa9.23□□□□□ -0.93
U2AF1-210ENST00000478282 SPRR1BP22528 89 aa9.22□□□□□ -0.93
U2AF1-210ENST00000478282 A8MU10 97 aa9.2□□□□□ -0.94
U2AF1-210ENST00000478282 CHKB-CPT1BH3BT56 60 aa9.18□□□□□ -0.94
U2AF1-210ENST00000478282 KRTAP11-1Q8IUC1 163 aa9.18□□□□□ -0.94
U2AF1-210ENST00000478282 H0Y9J4 135 aa9.17□□□□□ -0.94
U2AF1-210ENST00000478282 PRR15LQ9BU68 103 aa9.17□□□□□ -0.94
U2AF1-210ENST00000478282 MMP24-AS1A0A0U1RRL7 71 aa9.17□□□□□ -0.94
U2AF1-210ENST00000478282 PHF5AQ7RTV0 110 aaKnown RBP9.16□□□□□ -0.94
U2AF1-210ENST00000478282 STAB2Q8WWQ8 2551 aa9.16□□□□□ -0.94
U2AF1-210ENST00000478282 COA5Q86WW8 74 aa9.14□□□□□ -0.95
U2AF1-210ENST00000478282 IGLV7-46A0A075B6I9 117 aa9.14□□□□□ -0.95
U2AF1-210ENST00000478282 STARD9Q9P2P6 4700 aa9.14□□□□□ -0.95
U2AF1-210ENST00000478282 KRTAP1-5Q9BYS1 174 aa9.13□□□□□ -0.95
U2AF1-210ENST00000478282 CHTF8P0CG12 524 aa9.12□□□□□ -0.95
U2AF1-210ENST00000478282 Q75L30 129 aa9.11□□□□□ -0.95
U2AF1-210ENST00000478282 PLECQ15149 4684 aaKnown RBP9.11□□□□□ -0.95
U2AF1-210ENST00000478282 LOC101927531A0A1B0GV80 90 aa9.1□□□□□ -0.95
U2AF1-210ENST00000478282 SRRM2Q9UQ35 2752 aaKnown RBP9.1□□□□□ -0.95
U2AF1-210ENST00000478282 DNAH10Q8IVF4 4471 aa9.09□□□□□ -0.95
U2AF1-210ENST00000478282 APLNQ9ULZ1 77 aa9.08□□□□□ -0.96
U2AF1-210ENST00000478282 LYSTQ99698 3801 aa9.07□□□□□ -0.96
U2AF1-210ENST00000478282 ASB16-AS1Q495Z4 193 aa9.07□□□□□ -0.96
U2AF1-210ENST00000478282 PCOTHQ58A44 107 aa9.07□□□□□ -0.96
U2AF1-210ENST00000478282 TP53AIP1Q9HCN2 124 aa9.07□□□□□ -0.96
U2AF1-210ENST00000478282 LCA10Q71F78 164 aa9.06□□□□□ -0.96
U2AF1-210ENST00000478282 NUPR2A6NF83 97 aa9.06□□□□□ -0.96
U2AF1-210ENST00000478282 VPS13DQ5THJ4 4388 aa9.06□□□□□ -0.96
U2AF1-210ENST00000478282 CD164Q04900 197 aa9.06□□□□□ -0.96
U2AF1-210ENST00000478282 A6NED7 52 aa9.05□□□□□ -0.96
U2AF1-210ENST00000478282 MOBPQ13875 183 aa9.05□□□□□ -0.96
U2AF1-210ENST00000478282 C14orf177Q52M58 125 aa9.05□□□□□ -0.96
U2AF1-210ENST00000478282 Q96NJ1 140 aa9.05□□□□□ -0.96
U2AF1-210ENST00000478282 ATP11AUNQ6ZP68 121 aa9.04□□□□□ -0.96
U2AF1-210ENST00000478282 SPTSSBQ8NFR3 76 aa9.03□□□□□ -0.96
U2AF1-210ENST00000478282 Q6ZR54 194 aa9.03□□□□□ -0.96
U2AF1-210ENST00000478282 KRTAP13-1Q8IUC0 172 aa9.03□□□□□ -0.96
U2AF1-210ENST00000478282 DNAH6Q9C0G6 4158 aa9.02□□□□□ -0.96
U2AF1-210ENST00000478282 TENM2Q9NT68 2774 aa9.02□□□□□ -0.97
U2AF1-210ENST00000478282 C8orf17Q9NRJ1 99 aa9.02□□□□□ -0.97
U2AF1-210ENST00000478282 KTN1-AS1Q86SY8 53 aa9.02□□□□□ -0.97
U2AF1-210ENST00000478282 WWC2-AS2Q96NR7 200 aa9.01□□□□□ -0.97
U2AF1-210ENST00000478282 LINC01558Q9Y6Z2 57 aa9.01□□□□□ -0.97
U2AF1-210ENST00000478282 TGP01266 2768 aa8.99□□□□□ -0.97
U2AF1-210ENST00000478282 CDC42SE1Q9NRR8 79 aa8.99□□□□□ -0.97
U2AF1-210ENST00000478282 PLAC8Q9NZF1 115 aa8.99□□□□□ -0.97
U2AF1-210ENST00000478282 IGLV9-49A0A0B4J1Y8 123 aa8.99□□□□□ -0.97
U2AF1-210ENST00000478282 ALMS1Q8TCU4 4167 aa8.99□□□□□ -0.97
U2AF1-210ENST00000478282 SPAG11AQ6PDA7 123 aa8.98□□□□□ -0.97
U2AF1-210ENST00000478282 UBE2DNLQ8IWF7 75 aa8.98□□□□□ -0.97
U2AF1-210ENST00000478282 A6NN06 94 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms