RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 PAM16Q9Y3D7 125 aa7.55□□□□□ -1.2
HDAC7-222ENST00000477937 TCL1BO95988 128 aa7.54□□□□□ -1.2
HDAC7-222ENST00000477937 SPATA45Q537H7 98 aa7.54□□□□□ -1.2
HDAC7-222ENST00000477937 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.54□□□□□ -1.2
HDAC7-222ENST00000477937 HIGD1BQ9P298 99 aa7.54□□□□□ -1.2
HDAC7-222ENST00000477937 CFC1BP0CG36 223 aa7.53□□□□□ -1.2
HDAC7-222ENST00000477937 CFC1P0CG37 223 aa7.53□□□□□ -1.2
HDAC7-222ENST00000477937 Q6JHZ5 121 aa7.53□□□□□ -1.2
HDAC7-222ENST00000477937 RAB37Q96AX2 223 aa7.53□□□□□ -1.2
HDAC7-222ENST00000477937 VAMP8Q9BV40 100 aa7.53□□□□□ -1.2
HDAC7-222ENST00000477937 PPDPFLQ8WWR9 84 aa7.52□□□□□ -1.21
HDAC7-222ENST00000477937 IGLV8-61A0A075B6I0 122 aa7.51□□□□□ -1.21
HDAC7-222ENST00000477937 SNCGO76070 127 aa7.51□□□□□ -1.21
HDAC7-222ENST00000477937 OCIAD2Q56VL3 154 aa7.51□□□□□ -1.21
HDAC7-222ENST00000477937 SNHG12Q9BXW3 62 aa7.51□□□□□ -1.21
HDAC7-222ENST00000477937 CLEC2BQ92478 149 aa7.5□□□□□ -1.21
HDAC7-222ENST00000477937 FAT4Q6V0I7 4981 aa7.5□□□□□ -1.21
HDAC7-222ENST00000477937 A0A0B4J2C4 111 aa7.49□□□□□ -1.21
HDAC7-222ENST00000477937 PCOTHQ58A44 107 aa7.49□□□□□ -1.21
HDAC7-222ENST00000477937 IGFL1Q6UW32 110 aa7.49□□□□□ -1.21
HDAC7-222ENST00000477937 C2orf91Q6ZV80 131 aa7.49□□□□□ -1.21
HDAC7-222ENST00000477937 H0YGX0 51 aa7.48□□□□□ -1.21
HDAC7-222ENST00000477937 TRBV7-7A0A0K0K1E9 115 aa7.47□□□□□ -1.21
HDAC7-222ENST00000477937 CEND1Q8N111 149 aa7.47□□□□□ -1.21
HDAC7-222ENST00000477937 TMEM238LA0A1B0GVL6 79 aa7.46□□□□□ -1.22
HDAC7-222ENST00000477937 A6NJY4 79 aa7.46□□□□□ -1.22
HDAC7-222ENST00000477937 PRO1854Q9UHT4 67 aa7.45□□□□□ -1.22
HDAC7-222ENST00000477937 H3BUT2 72 aa7.43□□□□□ -1.22
HDAC7-222ENST00000477937 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
HDAC7-222ENST00000477937 FAM218AQ96MZ4 157 aa7.42□□□□□ -1.22
HDAC7-222ENST00000477937 A0A1B0GX51 115 aa7.41□□□□□ -1.22
HDAC7-222ENST00000477937 GHRHP01286 108 aa7.41□□□□□ -1.22
HDAC7-222ENST00000477937 FXYD2P54710 66 aa7.41□□□□□ -1.22
HDAC7-222ENST00000477937 NDUFV3P56181 108 aaKnown RBP7.41□□□□□ -1.22
HDAC7-222ENST00000477937 RPL37P61927 97 aaKnown RBP7.41□□□□□ -1.22
HDAC7-222ENST00000477937 LST1O00453 97 aa7.39□□□□□ -1.23
HDAC7-222ENST00000477937 PYY3Q5JQD4 70 aa7.39□□□□□ -1.23
HDAC7-222ENST00000477937 Q6Q795 121 aa7.39□□□□□ -1.23
HDAC7-222ENST00000477937 H3BMG7 143 aa7.37□□□□□ -1.23
HDAC7-222ENST00000477937 TRIAP1O43715 76 aa7.37□□□□□ -1.23
HDAC7-222ENST00000477937 FABP2P12104 132 aa7.37□□□□□ -1.23
HDAC7-222ENST00000477937 TEN1Q86WV5 123 aa7.37□□□□□ -1.23
HDAC7-222ENST00000477937 SS18L2Q9UHA2 77 aa7.37□□□□□ -1.23
HDAC7-222ENST00000477937 HSD52Q0P140 79 aa7.36□□□□□ -1.23
HDAC7-222ENST00000477937 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
HDAC7-222ENST00000477937 KRTAP19-2Q3LHN2 52 aa7.35□□□□□ -1.23
HDAC7-222ENST00000477937 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.23
HDAC7-222ENST00000477937 DNAL4O96015 105 aa7.33□□□□□ -1.24
HDAC7-222ENST00000477937 PSMB2P49721 201 aa7.33□□□□□ -1.24
HDAC7-222ENST00000477937 COX6CP09669 75 aa7.32□□□□□ -1.24
HDAC7-222ENST00000477937 TMA7Q9Y2S6 64 aaKnown RBP7.32□□□□□ -1.24
HDAC7-222ENST00000477937 A0A087WSZ3 146 aa7.31□□□□□ -1.24
HDAC7-222ENST00000477937 H3BQ85 93 aa7.31□□□□□ -1.24
HDAC7-222ENST00000477937 K7ERJ3 54 aa7.31□□□□□ -1.24
HDAC7-222ENST00000477937 UQCR10Q9UDW1 63 aa7.31□□□□□ -1.24
HDAC7-222ENST00000477937 ATP11AUNQ6ZP68 121 aa7.3□□□□□ -1.24
HDAC7-222ENST00000477937 Q75L30 129 aa7.3□□□□□ -1.24
HDAC7-222ENST00000477937 ORMDL1Q9P0S3 153 aa7.3□□□□□ -1.24
HDAC7-222ENST00000477937 TMEM256-PLSCR3K7ERE1 68 aa7.28□□□□□ -1.24
HDAC7-222ENST00000477937 MT1HP80294 61 aa7.28□□□□□ -1.24
HDAC7-222ENST00000477937 Q96NJ1 140 aa7.28□□□□□ -1.24
HDAC7-222ENST00000477937 A0A1W2PNM2 257 aa7.27□□□□□ -1.25
HDAC7-222ENST00000477937 ANKRD29Q8N6D5 301 aa7.27□□□□□ -1.25
HDAC7-222ENST00000477937 TRBV7-4A0A0J9YYF1 115 aa7.25□□□□□ -1.25
HDAC7-222ENST00000477937 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
HDAC7-222ENST00000477937 A0A1B0GV72 72 aa7.24□□□□□ -1.25
HDAC7-222ENST00000477937 SCGB1C2P0DMR2 95 aa7.23□□□□□ -1.25
HDAC7-222ENST00000477937 UBE2V1Q13404 147 aa7.22□□□□□ -1.25
HDAC7-222ENST00000477937 C20orf166-AS1Q96NR2 134 aa7.22□□□□□ -1.25
HDAC7-222ENST00000477937 SIGMAR1Q99720 223 aa7.22□□□□□ -1.25
HDAC7-222ENST00000477937 TRACP01848 142 aa7.21□□□□□ -1.26
HDAC7-222ENST00000477937 LCE2DQ5TA82 110 aaPredicted RBP7.21□□□□□ -1.26
HDAC7-222ENST00000477937 A8MUU9 505 aa7.2□□□□□ -1.26
HDAC7-222ENST00000477937 CCKP06307 115 aa7.2□□□□□ -1.26
HDAC7-222ENST00000477937 M0R2T5 61 aa7.19□□□□□ -1.26
HDAC7-222ENST00000477937 IGKV4-1P06312 121 aa7.19□□□□□ -1.26
HDAC7-222ENST00000477937 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
HDAC7-222ENST00000477937 DSCR10P59022 87 aa7.18□□□□□ -1.26
HDAC7-222ENST00000477937 LINC00313P59037 77 aa7.17□□□□□ -1.26
HDAC7-222ENST00000477937 RBM3P98179 157 aaKnown RBP7.16□□□□□ -1.26
HDAC7-222ENST00000477937 KRTAP10-6P60371 365 aaPredicted RBP7.15□□□□□ -1.26
HDAC7-222ENST00000477937 DSCR8Q96T75 97 aa7.15□□□□□ -1.26
HDAC7-222ENST00000477937 VPS25Q9BRG1 176 aa7.15□□□□□ -1.26
HDAC7-222ENST00000477937 LINC00472Q9H8W2 130 aa7.15□□□□□ -1.26
HDAC7-222ENST00000477937 M0R143 59 aa7.14□□□□□ -1.27
HDAC7-222ENST00000477937 BAALC-AS2P0C853 105 aa7.14□□□□□ -1.27
HDAC7-222ENST00000477937 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
HDAC7-222ENST00000477937 DEFB116Q30KQ4 102 aa7.14□□□□□ -1.27
HDAC7-222ENST00000477937 TRBV20-1A0A075B6N2 111 aa7.1□□□□□ -1.27
HDAC7-222ENST00000477937 C9JAW5 83 aa7.1□□□□□ -1.27
HDAC7-222ENST00000477937 C21orf62-AS1Q17RA5 79 aa7.1□□□□□ -1.27
HDAC7-222ENST00000477937 IGHV6-1A0A0B4J1U7 121 aa7.09□□□□□ -1.27
HDAC7-222ENST00000477937 KRTAP16-1A8MUX0 517 aa7.09□□□□□ -1.27
HDAC7-222ENST00000477937 ATXN8Q156A1 80 aa7.09□□□□□ -1.27
HDAC7-222ENST00000477937 NOTCH2NLQ7Z3S9 236 aa7.09□□□□□ -1.27
HDAC7-222ENST00000477937 SMIM6P0DI80 62 aa7.07□□□□□ -1.28
HDAC7-222ENST00000477937 NAA38Q9BRA0 125 aaKnown RBP7.07□□□□□ -1.28
HDAC7-222ENST00000477937 FLGP20930 4061 aaPredicted RBP7.06□□□□□ -1.28
HDAC7-222ENST00000477937 A0A1B0GVX0 72 aa7.05□□□□□ -1.28
HDAC7-222ENST00000477937 C8orf87E5RJ46 101 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms