RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 ATOH7Q8N100 152 aa6.32□□□□□ -1.4
CPSF7-211ENST00000477890 VPS25Q9BRG1 176 aa6.32□□□□□ -1.4
CPSF7-211ENST00000477890 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-211ENST00000477890 BVES-AS1Q5T3Y7 98 aa6.31□□□□□ -1.4
CPSF7-211ENST00000477890 TEX49A0A1B0GTD5 131 aa6.3□□□□□ -1.4
CPSF7-211ENST00000477890 ZNF815PA8K554 130 aa6.3□□□□□ -1.4
CPSF7-211ENST00000477890 SYS1-DBNDD2H3BUS1 97 aa6.3□□□□□ -1.4
CPSF7-211ENST00000477890 TAX1BP3O14907 124 aa6.3□□□□□ -1.4
CPSF7-211ENST00000477890 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-211ENST00000477890 OCIAD2Q56VL3 154 aa6.3□□□□□ -1.4
CPSF7-211ENST00000477890 M0R2T5 61 aa6.29□□□□□ -1.4
CPSF7-211ENST00000477890 C1orf195Q5TG92 126 aa6.29□□□□□ -1.4
CPSF7-211ENST00000477890 GTF2H5Q6ZYL4 71 aa6.29□□□□□ -1.4
CPSF7-211ENST00000477890 Q5XG85 94 aa6.28□□□□□ -1.4
CPSF7-211ENST00000477890 SMIM29Q86T20 159 aa6.28□□□□□ -1.4
CPSF7-211ENST00000477890 TTTY13Q9BZ97 58 aa6.28□□□□□ -1.4
CPSF7-211ENST00000477890 A0A0G2JQZ4 141 aa6.27□□□□□ -1.41
CPSF7-211ENST00000477890 A6NDN8 102 aa6.27□□□□□ -1.41
CPSF7-211ENST00000477890 RPL37P61927 97 aaKnown RBP6.27□□□□□ -1.41
CPSF7-211ENST00000477890 LINC01545Q5VT33 79 aa6.27□□□□□ -1.41
CPSF7-211ENST00000477890 COX6B2Q6YFQ2 88 aa6.27□□□□□ -1.41
CPSF7-211ENST00000477890 Q6ZVH6 145 aa6.27□□□□□ -1.41
CPSF7-211ENST00000477890 TRBV7-6A0A0J9YX20 115 aa6.26□□□□□ -1.41
CPSF7-211ENST00000477890 COX8AP10176 69 aa6.26□□□□□ -1.41
CPSF7-211ENST00000477890 A0A1B0GWB2 263 aa6.25□□□□□ -1.41
CPSF7-211ENST00000477890 IGLV5-48A0A075B6I7 105 aa6.24□□□□□ -1.41
CPSF7-211ENST00000477890 HSD52Q0P140 79 aa6.24□□□□□ -1.41
CPSF7-211ENST00000477890 SCGB1D4Q6XE38 83 aa6.24□□□□□ -1.41
CPSF7-211ENST00000477890 C9orf118A6NHY6 69 aa6.23□□□□□ -1.41
CPSF7-211ENST00000477890 K7EP34 96 aa6.22□□□□□ -1.41
CPSF7-211ENST00000477890 COPS9Q8WXC6 57 aa6.22□□□□□ -1.41
CPSF7-211ENST00000477890 TCL1BO95988 128 aa6.21□□□□□ -1.42
CPSF7-211ENST00000477890 C2orf91Q6ZV80 131 aa6.21□□□□□ -1.42
CPSF7-211ENST00000477890 A4D1N5 150 aa6.2□□□□□ -1.42
CPSF7-211ENST00000477890 SCGB1A1P11684 91 aa6.2□□□□□ -1.42
CPSF7-211ENST00000477890 IFITM1P13164 125 aa6.2□□□□□ -1.42
CPSF7-211ENST00000477890 NHP2Q9NX24 153 aaKnown RBP6.19□□□□□ -1.42
CPSF7-211ENST00000477890 F8WEM9 126 aa6.18□□□□□ -1.42
CPSF7-211ENST00000477890 FABP2P12104 132 aa6.18□□□□□ -1.42
CPSF7-211ENST00000477890 MUSTN1Q8IVN3 82 aa6.18□□□□□ -1.42
CPSF7-211ENST00000477890 FLGP20930 4061 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-211ENST00000477890 H3BUT2 72 aa6.17□□□□□ -1.42
CPSF7-211ENST00000477890 J3QR89 54 aa6.17□□□□□ -1.42
CPSF7-211ENST00000477890 SMIM11BQ8TCY0 68 aa6.17□□□□□ -1.42
CPSF7-211ENST00000477890 SPCS1Q9Y6A9 102 aa6.17□□□□□ -1.42
CPSF7-211ENST00000477890 TRAV13-2A0A0B4J235 113 aa6.16□□□□□ -1.42
CPSF7-211ENST00000477890 A0A1W2PPM0 123 aa6.16□□□□□ -1.42
CPSF7-211ENST00000477890 PCP2Q8IVA1 136 aa6.16□□□□□ -1.42
CPSF7-211ENST00000477890 HIGD1BQ9P298 99 aa6.16□□□□□ -1.42
CPSF7-211ENST00000477890 Q6Q795 121 aa6.15□□□□□ -1.42
CPSF7-211ENST00000477890 TRBV7-7A0A0K0K1E9 115 aa6.13□□□□□ -1.43
CPSF7-211ENST00000477890 ATP11AUNQ6ZP68 121 aa6.13□□□□□ -1.43
CPSF7-211ENST00000477890 A0A1B0GV72 72 aa6.12□□□□□ -1.43
CPSF7-211ENST00000477890 Q6JHZ5 121 aa6.12□□□□□ -1.43
CPSF7-211ENST00000477890 LINC00575Q6W349 94 aa6.12□□□□□ -1.43
CPSF7-211ENST00000477890 CLEC2BQ92478 149 aa6.12□□□□□ -1.43
CPSF7-211ENST00000477890 OBSCN-AS1Q96MR7 158 aa6.12□□□□□ -1.43
CPSF7-211ENST00000477890 SIGMAR1Q99720 223 aa6.12□□□□□ -1.43
CPSF7-211ENST00000477890 F8W1H4 67 aa6.11□□□□□ -1.43
CPSF7-211ENST00000477890 IGFL1Q6UW32 110 aa6.11□□□□□ -1.43
CPSF7-211ENST00000477890 Q6ZQY7 126 aa6.11□□□□□ -1.43
CPSF7-211ENST00000477890 RAB37Q96AX2 223 aa6.11□□□□□ -1.43
CPSF7-211ENST00000477890 hADV29S1A0JD25 119 aa6.1□□□□□ -1.43
CPSF7-211ENST00000477890 Q75L30 129 aa6.1□□□□□ -1.43
CPSF7-211ENST00000477890 MTURNQ8N3F0 131 aa6.09□□□□□ -1.43
CPSF7-211ENST00000477890 CEND1Q8N111 149 aa6.08□□□□□ -1.44
CPSF7-211ENST00000477890 NAA38Q9BRA0 125 aaKnown RBP6.08□□□□□ -1.44
CPSF7-211ENST00000477890 LST1O00453 97 aa6.06□□□□□ -1.44
CPSF7-211ENST00000477890 FXYD2P54710 66 aa6.06□□□□□ -1.44
CPSF7-211ENST00000477890 SVIPQ8NHG7 77 aa6.06□□□□□ -1.44
CPSF7-211ENST00000477890 Q96NJ1 140 aa6.06□□□□□ -1.44
CPSF7-211ENST00000477890 LYRM7Q5U5X0 104 aa6.05□□□□□ -1.44
CPSF7-211ENST00000477890 TMEM238LA0A1B0GVL6 79 aa6.04□□□□□ -1.44
CPSF7-211ENST00000477890 A6NJY4 79 aa6.04□□□□□ -1.44
CPSF7-211ENST00000477890 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.04□□□□□ -1.44
CPSF7-211ENST00000477890 CFC1P0CG37 223 aa6.03□□□□□ -1.44
CPSF7-211ENST00000477890 HIST1H4GQ99525 98 aa6.03□□□□□ -1.44
CPSF7-211ENST00000477890 K7ERJ3 54 aa6.02□□□□□ -1.45
CPSF7-211ENST00000477890 PPDPFLQ8WWR9 84 aa6.02□□□□□ -1.45
CPSF7-211ENST00000477890 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
CPSF7-211ENST00000477890 KRTAP9-8Q9BYQ0 159 aa6.01□□□□□ -1.45
CPSF7-211ENST00000477890 TRBV20-1A0A075B6N2 111 aa6□□□□□ -1.45
CPSF7-211ENST00000477890 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
CPSF7-211ENST00000477890 H3BMG7 143 aa6□□□□□ -1.45
CPSF7-211ENST00000477890 C20orf166-AS1Q96NR2 134 aa6□□□□□ -1.45
CPSF7-211ENST00000477890 SS18L2Q9UHA2 77 aa6□□□□□ -1.45
CPSF7-211ENST00000477890 A8MUU9 505 aa5.99□□□□□ -1.45
CPSF7-211ENST00000477890 ETDBQ3ZM63 59 aa5.99□□□□□ -1.45
CPSF7-211ENST00000477890 PRO0461Q9UI25 63 aa5.99□□□□□ -1.45
CPSF7-211ENST00000477890 TEN1Q86WV5 123 aa5.96□□□□□ -1.46
CPSF7-211ENST00000477890 A0A087WSZ3 146 aa5.95□□□□□ -1.46
CPSF7-211ENST00000477890 PSMB2P49721 201 aa5.94□□□□□ -1.46
CPSF7-211ENST00000477890 DSCR10P59022 87 aa5.94□□□□□ -1.46
CPSF7-211ENST00000477890 SNCGO76070 127 aa5.93□□□□□ -1.46
CPSF7-211ENST00000477890 NDUFV3P56181 108 aaKnown RBP5.93□□□□□ -1.46
CPSF7-211ENST00000477890 USH2AO75445 5202 aa5.92□□□□□ -1.46
CPSF7-211ENST00000477890 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
CPSF7-211ENST00000477890 FAM236DA0A1B0GTK5 79 aa5.92□□□□□ -1.46
CPSF7-211ENST00000477890 FAM236CP0DP71 79 aa5.92□□□□□ -1.46
CPSF7-211ENST00000477890 MT2AP02795 61 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms