RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TEP1Q99973 2627 aaKnown RBP11.51□□□□□ -0.57
VARS2-209ENST00000477288 FAM229BQ4G0N7 80 aa11.51□□□□□ -0.57
VARS2-209ENST00000477288 ZCCHC13Q8WW36 166 aaKnown RBP11.51□□□□□ -0.57
VARS2-209ENST00000477288 A0A0C4DFX4 3053 aa11.5□□□□□ -0.57
VARS2-209ENST00000477288 WDFY4Q6ZS81 3184 aa11.49□□□□□ -0.57
VARS2-209ENST00000477288 LAMA2P24043 3122 aaKnown RBP11.49□□□□□ -0.57
VARS2-209ENST00000477288 Q8N9P0 234 aaPredicted RBP11.48□□□□□ -0.57
VARS2-209ENST00000477288 CR1P17927 2039 aa11.47□□□□□ -0.57
VARS2-209ENST00000477288 PRUNE2Q8WUY3 3088 aa11.46□□□□□ -0.57
VARS2-209ENST00000477288 CHD6Q8TD26 2715 aa11.46□□□□□ -0.58
VARS2-209ENST00000477288 PLAC8Q9NZF1 115 aa11.46□□□□□ -0.58
VARS2-209ENST00000477288 DMAC1Q96GE9 116 aa11.45□□□□□ -0.58
VARS2-209ENST00000477288 TEX15Q9BXT5 2789 aa11.43□□□□□ -0.58
VARS2-209ENST00000477288 Q75L30 129 aa11.43□□□□□ -0.58
VARS2-209ENST00000477288 DSPP15924 2871 aaKnown RBP11.42□□□□□ -0.58
VARS2-209ENST00000477288 MMP24-AS1A0A0U1RRL7 71 aa11.42□□□□□ -0.58
VARS2-209ENST00000477288 STAB1Q9NY15 2570 aa11.41□□□□□ -0.58
VARS2-209ENST00000477288 SETXQ7Z333 2677 aaKnown RBP11.4□□□□□ -0.58
VARS2-209ENST00000477288 R4GN34 69 aa11.4□□□□□ -0.59
VARS2-209ENST00000477288 PRAC1Q96KF2 57 aa11.39□□□□□ -0.59
VARS2-209ENST00000477288 COL6A5A8TX70 2615 aa11.37□□□□□ -0.59
VARS2-209ENST00000477288 Q5VSD8 79 aa11.35□□□□□ -0.59
VARS2-209ENST00000477288 Q5W150 140 aa11.34□□□□□ -0.59
VARS2-209ENST00000477288 LINC01558Q9Y6Z2 57 aa11.34□□□□□ -0.59
VARS2-209ENST00000477288 MAP1AP78559 2803 aaPredicted RBP11.34□□□□□ -0.59
VARS2-209ENST00000477288 UNC79Q9P2D8 2635 aa11.33□□□□□ -0.6
VARS2-209ENST00000477288 SPINK7P58062 85 aa11.33□□□□□ -0.6
VARS2-209ENST00000477288 TRIOO75962 3097 aa11.32□□□□□ -0.6
VARS2-209ENST00000477288 SEC61BP60468 96 aaKnown RBP11.32□□□□□ -0.6
VARS2-209ENST00000477288 UNC80Q8N2C7 3258 aa11.31□□□□□ -0.6
VARS2-209ENST00000477288 A0A0A0MQY5 61 aa11.29□□□□□ -0.6
VARS2-209ENST00000477288 IGSF10Q6WRI0 2623 aa11.29□□□□□ -0.6
VARS2-209ENST00000477288 NOTCH1P46531 2555 aa11.26□□□□□ -0.61
VARS2-209ENST00000477288 XIRP2A4UGR9 3374 aa11.25□□□□□ -0.61
VARS2-209ENST00000477288 Q8NDZ9 215 aa11.25□□□□□ -0.61
VARS2-209ENST00000477288 SPRR1AP35321 89 aa11.23□□□□□ -0.61
VARS2-209ENST00000477288 VPS13AQ96RL7 3174 aa11.2□□□□□ -0.62
VARS2-209ENST00000477288 GCN1Q92616 2671 aaKnown RBP11.2□□□□□ -0.62
VARS2-209ENST00000477288 M0QZ58 72 aa11.19□□□□□ -0.62
VARS2-209ENST00000477288 KRTAP10-1P60331 282 aa11.19□□□□□ -0.62
VARS2-209ENST00000477288 KRTAP1-5Q9BYS1 174 aa11.19□□□□□ -0.62
VARS2-209ENST00000477288 LCE6AA0A183 80 aa11.18□□□□□ -0.62
VARS2-209ENST00000477288 LINC00472Q9H8W2 130 aa11.17□□□□□ -0.62
VARS2-209ENST00000477288 Q5VV11 94 aa11.17□□□□□ -0.62
VARS2-209ENST00000477288 H3BS24 57 aa11.17□□□□□ -0.62
VARS2-209ENST00000477288 NBEAL1Q6ZS30 2694 aa11.15□□□□□ -0.62
VARS2-209ENST00000477288 KRTAP10-2P60368 255 aa11.15□□□□□ -0.62
VARS2-209ENST00000477288 Q5XG85 94 aa11.14□□□□□ -0.63
VARS2-209ENST00000477288 UBR5O95071 2799 aaPredicted RBP11.14□□□□□ -0.63
VARS2-209ENST00000477288 SPRR1BP22528 89 aa11.13□□□□□ -0.63
VARS2-209ENST00000477288 RPL37P61927 97 aaKnown RBP11.13□□□□□ -0.63
VARS2-209ENST00000477288 CYSTM1Q9H1C7 97 aa11.12□□□□□ -0.63
VARS2-209ENST00000477288 ROMO1P60602 79 aa11.12□□□□□ -0.63
VARS2-209ENST00000477288 FP248Q71RG6 208 aaPredicted RBP11.11□□□□□ -0.63
VARS2-209ENST00000477288 PLAC4Q8WY50 150 aa11.1□□□□□ -0.63
VARS2-209ENST00000477288 H1FX-AS1Q4G0G2 97 aa11.08□□□□□ -0.64
VARS2-209ENST00000477288 FRYQ5TBA9 3013 aa11.06□□□□□ -0.64
VARS2-209ENST00000477288 CDH23Q9H251 3354 aa11.06□□□□□ -0.64
VARS2-209ENST00000477288 KRTAP26-1Q6PEX3 210 aa11.06□□□□□ -0.64
VARS2-209ENST00000477288 BAHCC1Q9P281 2608 aa11.05□□□□□ -0.64
VARS2-209ENST00000477288 ADM2Q7Z4H4 148 aa11.05□□□□□ -0.64
VARS2-209ENST00000477288 NBEAL2Q6ZNJ1 2754 aa11.02□□□□□ -0.65
VARS2-209ENST00000477288 SPATA8Q6RVD6 105 aa11□□□□□ -0.65
VARS2-209ENST00000477288 FLNCQ14315 2725 aa10.99□□□□□ -0.65
VARS2-209ENST00000477288 OXTP01178 125 aa10.96□□□□□ -0.66
VARS2-209ENST00000477288 Q6ZR54 194 aa10.93□□□□□ -0.66
VARS2-209ENST00000477288 ITPR1Q14643 2758 aa10.92□□□□□ -0.66
VARS2-209ENST00000477288 PANO1I0J062 215 aa10.9□□□□□ -0.66
VARS2-209ENST00000477288 NSD1Q96L73 2696 aaPredicted RBP10.9□□□□□ -0.66
VARS2-209ENST00000477288 ATMQ13315 3056 aa10.87□□□□□ -0.67
VARS2-209ENST00000477288 SZT2Q5T011 3432 aa10.85□□□□□ -0.67
VARS2-209ENST00000477288 ITPR2Q14571 2701 aa10.84□□□□□ -0.67
VARS2-209ENST00000477288 TACC2O95359 2948 aa10.84□□□□□ -0.67
VARS2-209ENST00000477288 FRYLO94915 3013 aa10.83□□□□□ -0.67
VARS2-209ENST00000477288 CELSR3Q9NYQ7 3312 aa10.83□□□□□ -0.68
VARS2-209ENST00000477288 A0A087X002 238 aa10.83□□□□□ -0.68
VARS2-209ENST00000477288 LAMA1P25391 3075 aa10.82□□□□□ -0.68
VARS2-209ENST00000477288 FLG2Q5D862 2391 aaPredicted RBP10.82□□□□□ -0.68
VARS2-209ENST00000477288 COL12A1Q99715 3063 aa10.8□□□□□ -0.68
VARS2-209ENST00000477288 STAB2Q8WWQ8 2551 aa10.78□□□□□ -0.68
VARS2-209ENST00000477288 VCANP13611 3396 aa10.75□□□□□ -0.69
VARS2-209ENST00000477288 KALRNO60229 2985 aa10.73□□□□□ -0.69
VARS2-209ENST00000477288 ADGRG4Q8IZF6 3080 aa10.72□□□□□ -0.69
VARS2-209ENST00000477288 KRTAP4-16G5E9R7 235 aaPredicted RBP10.7□□□□□ -0.7
VARS2-209ENST00000477288 FREM2Q5SZK8 3169 aa10.7□□□□□ -0.7
VARS2-209ENST00000477288 NBEAQ8NFP9 2946 aa10.69□□□□□ -0.7
VARS2-209ENST00000477288 C20orf166-AS1Q96NR2 134 aa10.69□□□□□ -0.7
VARS2-209ENST00000477288 NOTCH2NLQ7Z3S9 236 aa10.69□□□□□ -0.7
VARS2-209ENST00000477288 BOD1L1Q8NFC6 3051 aa10.69□□□□□ -0.7
VARS2-209ENST00000477288 DMXL2Q8TDJ6 3036 aa10.68□□□□□ -0.7
VARS2-209ENST00000477288 KRTAP29-1A8MX34 341 aaPredicted RBP10.66□□□□□ -0.7
VARS2-209ENST00000477288 A8MU10 97 aa10.64□□□□□ -0.71
VARS2-209ENST00000477288 A8MUU9 505 aa10.64□□□□□ -0.71
VARS2-209ENST00000477288 ASB16-AS1Q495Z4 193 aa10.63□□□□□ -0.71
VARS2-209ENST00000477288 HIVEP1P15822 2718 aa10.62□□□□□ -0.71
VARS2-209ENST00000477288 REV3LO60673 3130 aa10.62□□□□□ -0.71
VARS2-209ENST00000477288 UTP20O75691 2785 aaKnown RBP10.61□□□□□ -0.71
VARS2-209ENST00000477288 LRBAP50851 2863 aa10.57□□□□□ -0.72
VARS2-209ENST00000477288 KRTAP11-1Q8IUC1 163 aa10.56□□□□□ -0.72
VARS2-209ENST00000477288 KRTAP16-1A8MUX0 517 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms