RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 K7EIM0 57 aa3.28□□□□□ -1.88
SPTLC3-205ENST00000476791 KAAG1Q9UBP8 84 aa3.28□□□□□ -1.88
SPTLC3-205ENST00000476791 NBEAQ8NFP9 2946 aa3.28□□□□□ -1.88
SPTLC3-205ENST00000476791 ASPMQ8IZT6 3477 aa3.27□□□□□ -1.89
SPTLC3-205ENST00000476791 MINOS1Q5TGZ0 78 aa3.27□□□□□ -1.89
SPTLC3-205ENST00000476791 KRTAP1-5Q9BYS1 174 aa3.27□□□□□ -1.89
SPTLC3-205ENST00000476791 USP9XQ93008 2570 aaPredicted RBP3.27□□□□□ -1.89
SPTLC3-205ENST00000476791 MYO9AB2RTY4 2548 aa3.27□□□□□ -1.89
SPTLC3-205ENST00000476791 WDR87Q6ZQQ6 2873 aa3.27□□□□□ -1.89
SPTLC3-205ENST00000476791 H0YAA0 97 aa3.27□□□□□ -1.89
SPTLC3-205ENST00000476791 LELP1Q5T871 98 aa3.27□□□□□ -1.89
SPTLC3-205ENST00000476791 FRYLO94915 3013 aa3.26□□□□□ -1.89
SPTLC3-205ENST00000476791 SPTY2D1-AS1A0A0U1RR47 76 aa3.26□□□□□ -1.89
SPTLC3-205ENST00000476791 ANGP03950 147 aaKnown RBP3.26□□□□□ -1.89
SPTLC3-205ENST00000476791 Q6ZRX8 168 aa3.26□□□□□ -1.89
SPTLC3-205ENST00000476791 C10orf95Q9H7T3 257 aa3.26□□□□□ -1.89
SPTLC3-205ENST00000476791 PTPN13Q12923 2485 aa3.26□□□□□ -1.89
SPTLC3-205ENST00000476791 CEP295Q9C0D2 2601 aa3.26□□□□□ -1.89
SPTLC3-205ENST00000476791 IGLV5-48A0A075B6I7 105 aa3.26□□□□□ -1.89
SPTLC3-205ENST00000476791 C6orf48Q9UBA6 75 aa3.25□□□□□ -1.89
SPTLC3-205ENST00000476791 ZFHX4Q86UP3 3567 aa3.25□□□□□ -1.89
SPTLC3-205ENST00000476791 A0A1B0GUV1 79 aa3.25□□□□□ -1.89
SPTLC3-205ENST00000476791 UBR5O95071 2799 aaPredicted RBP3.25□□□□□ -1.89
SPTLC3-205ENST00000476791 ABCA2Q9BZC7 2435 aa3.24□□□□□ -1.89
SPTLC3-205ENST00000476791 CRYBG3Q68DQ2 2970 aa3.24□□□□□ -1.89
SPTLC3-205ENST00000476791 H0YGG7 62 aa3.24□□□□□ -1.89
SPTLC3-205ENST00000476791 FBN3Q75N90 2809 aa3.24□□□□□ -1.89
SPTLC3-205ENST00000476791 CDH23Q9H251 3354 aa3.23□□□□□ -1.89
SPTLC3-205ENST00000476791 C2CD3Q4AC94 2353 aa3.23□□□□□ -1.89
SPTLC3-205ENST00000476791 LY6G6CO95867 125 aa3.23□□□□□ -1.89
SPTLC3-205ENST00000476791 IGFL1Q6UW32 110 aa3.23□□□□□ -1.89
SPTLC3-205ENST00000476791 ACACAQ13085 2346 aa3.23□□□□□ -1.89
SPTLC3-205ENST00000476791 SPTBN2O15020 2390 aa3.22□□□□□ -1.89
SPTLC3-205ENST00000476791 PCNX1Q96RV3 2341 aa3.22□□□□□ -1.89
SPTLC3-205ENST00000476791 ITPR1Q14643 2758 aa3.22□□□□□ -1.89
SPTLC3-205ENST00000476791 APC2O95996 2303 aa3.21□□□□□ -1.9
SPTLC3-205ENST00000476791 DEFB1P60022 68 aa3.21□□□□□ -1.9
SPTLC3-205ENST00000476791 LY6EQ16553 131 aa3.21□□□□□ -1.9
SPTLC3-205ENST00000476791 DMXL1Q9Y485 3027 aa3.21□□□□□ -1.9
SPTLC3-205ENST00000476791 SPTBN1Q01082 2364 aaKnown RBP3.21□□□□□ -1.9
SPTLC3-205ENST00000476791 DOPEY1Q5JWR5 2465 aa3.2□□□□□ -1.9
SPTLC3-205ENST00000476791 TENM4Q6N022 2769 aa3.19□□□□□ -1.9
SPTLC3-205ENST00000476791 LYNX1G3V0Z9 82 aa3.19□□□□□ -1.9
SPTLC3-205ENST00000476791 Q6ZSA8 131 aa3.19□□□□□ -1.9
SPTLC3-205ENST00000476791 HECTD1Q9ULT8 2610 aa3.19□□□□□ -1.9
SPTLC3-205ENST00000476791 FREM2Q5SZK8 3169 aa3.18□□□□□ -1.9
SPTLC3-205ENST00000476791 DMDP11532 3685 aa3.18□□□□□ -1.9
SPTLC3-205ENST00000476791 WNK1Q9H4A3 2382 aa3.17□□□□□ -1.9
SPTLC3-205ENST00000476791 C4orf3Q8WVX3 66 aa3.17□□□□□ -1.9
SPTLC3-205ENST00000476791 FBN1P35555 2871 aaKnown RBP3.17□□□□□ -1.9
SPTLC3-205ENST00000476791 DNAH14Q0VDD8 3507 aa3.17□□□□□ -1.9
SPTLC3-205ENST00000476791 DNAH12Q6ZR08 3092 aa3.17□□□□□ -1.9
SPTLC3-205ENST00000476791 PKDREJQ9NTG1 2253 aa3.17□□□□□ -1.9
SPTLC3-205ENST00000476791 KRTAP24-1Q3LI83 254 aa3.17□□□□□ -1.9
SPTLC3-205ENST00000476791 COX14Q96I36 57 aa3.17□□□□□ -1.9
SPTLC3-205ENST00000476791 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
SPTLC3-205ENST00000476791 JMJD1CQ15652 2540 aa3.17□□□□□ -1.9
SPTLC3-205ENST00000476791 WDFY3Q8IZQ1 3526 aa3.16□□□□□ -1.9
SPTLC3-205ENST00000476791 TEP1Q99973 2627 aaKnown RBP3.16□□□□□ -1.9
SPTLC3-205ENST00000476791 FBN2P35556 2912 aa3.16□□□□□ -1.9
SPTLC3-205ENST00000476791 CREBBPQ92793 2442 aa3.16□□□□□ -1.9
SPTLC3-205ENST00000476791 SPTAN1Q13813 2472 aaKnown RBP3.16□□□□□ -1.9
SPTLC3-205ENST00000476791 DEFB105AQ8NG35 78 aa3.16□□□□□ -1.9
SPTLC3-205ENST00000476791 TP53AIP1Q9HCN2 124 aa3.16□□□□□ -1.9
SPTLC3-205ENST00000476791 BOD1L1Q8NFC6 3051 aa3.16□□□□□ -1.9
SPTLC3-205ENST00000476791 GVQW2A0A096LPI5 108 aaPredicted RBP3.15□□□□□ -1.91
SPTLC3-205ENST00000476791 MMP24-AS1A0A0U1RRL7 71 aa3.15□□□□□ -1.91
SPTLC3-205ENST00000476791 COL12A1Q99715 3063 aa3.14□□□□□ -1.91
SPTLC3-205ENST00000476791 CFAP46Q8IYW2 2715 aa3.14□□□□□ -1.91
SPTLC3-205ENST00000476791 DEFB110Q30KQ9 67 aa3.14□□□□□ -1.91
SPTLC3-205ENST00000476791 LOC400499M0QZD8 3231 aa3.14□□□□□ -1.91
SPTLC3-205ENST00000476791 LAMA5O15230 3695 aa3.14□□□□□ -1.91
SPTLC3-205ENST00000476791 ABCA12Q86UK0 2595 aa3.14□□□□□ -1.91
SPTLC3-205ENST00000476791 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
SPTLC3-205ENST00000476791 ANAPC11Q9NYG5 84 aa3.13□□□□□ -1.91
SPTLC3-205ENST00000476791 TEX15Q9BXT5 2789 aa3.13□□□□□ -1.91
SPTLC3-205ENST00000476791 SPENQ96T58 3664 aaKnown RBP3.12□□□□□ -1.91
SPTLC3-205ENST00000476791 USP9YO00507 2555 aaPredicted RBP3.12□□□□□ -1.91
SPTLC3-205ENST00000476791 ATMQ13315 3056 aa3.12□□□□□ -1.91
SPTLC3-205ENST00000476791 LAMA1P25391 3075 aa3.12□□□□□ -1.91
SPTLC3-205ENST00000476791 DEFB130BP0DP73 79 aa3.11□□□□□ -1.91
SPTLC3-205ENST00000476791 DEFB130AP0DP74 79 aa3.11□□□□□ -1.91
SPTLC3-205ENST00000476791 UNQ6190/PRO20217Q6UXQ8 127 aa3.11□□□□□ -1.91
SPTLC3-205ENST00000476791 CLPSL2Q6UWE3 100 aa3.1□□□□□ -1.91
SPTLC3-205ENST00000476791 AKAP13Q12802 2813 aa3.1□□□□□ -1.91
SPTLC3-205ENST00000476791 MRPL34Q9BQ48 92 aaKnown RBP3.1□□□□□ -1.91
SPTLC3-205ENST00000476791 SRRM2Q9UQ35 2752 aaKnown RBP3.1□□□□□ -1.91
SPTLC3-205ENST00000476791 ZZEF1O43149 2961 aa3.1□□□□□ -1.91
SPTLC3-205ENST00000476791 U3KQA8 63 aa3.09□□□□□ -1.91
SPTLC3-205ENST00000476791 K7EIL1 84 aa3.08□□□□□ -1.92
SPTLC3-205ENST00000476791 Q6ZRN7 208 aaPredicted RBP3.08□□□□□ -1.92
SPTLC3-205ENST00000476791 F8P00451 2351 aa3.08□□□□□ -1.92
SPTLC3-205ENST00000476791 LRRK2Q5S007 2527 aa3.08□□□□□ -1.92
SPTLC3-205ENST00000476791 FRYQ5TBA9 3013 aa3.08□□□□□ -1.92
SPTLC3-205ENST00000476791 CSPG4Q6UVK1 2322 aa3.07□□□□□ -1.92
SPTLC3-205ENST00000476791 MYO15AQ9UKN7 3530 aa3.06□□□□□ -1.92
SPTLC3-205ENST00000476791 KRTAP10-6P60371 365 aaPredicted RBP3.06□□□□□ -1.92
SPTLC3-205ENST00000476791 NOTCH2Q04721 2471 aa3.05□□□□□ -1.92
SPTLC3-205ENST00000476791 INE1O15225 51 aa3.05□□□□□ -1.92
SPTLC3-205ENST00000476791 KRTAP7-1Q8IUC3 87 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms