RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 PROK2Q9HC23 129 aa1.64□□□□□ -2.15
SRGAP3-205ENST00000475560 USP9YO00507 2555 aaPredicted RBP1.64□□□□□ -2.15
SRGAP3-205ENST00000475560 HYDINQ4G0P3 5121 aa1.64□□□□□ -2.15
SRGAP3-205ENST00000475560 LINC01546A6NGU7 62 aa1.63□□□□□ -2.15
SRGAP3-205ENST00000475560 ZNF815PA8K554 130 aa1.63□□□□□ -2.15
SRGAP3-205ENST00000475560 SPINK4O60575 86 aa1.63□□□□□ -2.15
SRGAP3-205ENST00000475560 PRR15LQ9BU68 103 aa1.63□□□□□ -2.15
SRGAP3-205ENST00000475560 TMEM167BQ9NRX6 74 aa1.63□□□□□ -2.15
SRGAP3-205ENST00000475560 PKD1L1Q8TDX9 2849 aa1.63□□□□□ -2.15
SRGAP3-205ENST00000475560 PI4KAP42356 2102 aa1.63□□□□□ -2.15
SRGAP3-205ENST00000475560 PTPRQQ9UMZ3 2332 aa1.62□□□□□ -2.15
SRGAP3-205ENST00000475560 TLN2Q9Y4G6 2542 aa1.62□□□□□ -2.15
SRGAP3-205ENST00000475560 MGPP08493 103 aa1.62□□□□□ -2.15
SRGAP3-205ENST00000475560 TMEM263Q8WUH6 116 aaKnown RBP1.62□□□□□ -2.15
SRGAP3-205ENST00000475560 LINC00472Q9H8W2 130 aa1.62□□□□□ -2.15
SRGAP3-205ENST00000475560 WDR87Q6ZQQ6 2873 aa1.62□□□□□ -2.15
SRGAP3-205ENST00000475560 ITPR1Q14643 2758 aa1.62□□□□□ -2.15
SRGAP3-205ENST00000475560 HIVEP3Q5T1R4 2406 aa1.61□□□□□ -2.15
SRGAP3-205ENST00000475560 TRBV7-4A0A0J9YYF1 115 aa1.61□□□□□ -2.15
SRGAP3-205ENST00000475560 CPSF4LA6NMK7 179 aaKnown RBP1.61□□□□□ -2.15
SRGAP3-205ENST00000475560 M0R3E3 92 aa1.61□□□□□ -2.15
SRGAP3-205ENST00000475560 PSENENQ9NZ42 101 aa1.61□□□□□ -2.15
SRGAP3-205ENST00000475560 TIMM8BQ9Y5J9 83 aaPredicted RBP1.61□□□□□ -2.15
SRGAP3-205ENST00000475560 A0A087WVE0 104 aa1.6□□□□□ -2.15
SRGAP3-205ENST00000475560 A0A1B0GUT8 65 aa1.6□□□□□ -2.15
SRGAP3-205ENST00000475560 K7EMI3 77 aa1.6□□□□□ -2.15
SRGAP3-205ENST00000475560 COX6B1P14854 86 aa1.6□□□□□ -2.15
SRGAP3-205ENST00000475560 HMGA1P17096 107 aaKnown RBP1.6□□□□□ -2.15
SRGAP3-205ENST00000475560 DOPEY2Q9Y3R5 2298 aa1.6□□□□□ -2.15
SRGAP3-205ENST00000475560 MED13LQ71F56 2210 aa1.59□□□□□ -2.15
SRGAP3-205ENST00000475560 LOC730098B7Z3J9 87 aa1.59□□□□□ -2.15
SRGAP3-205ENST00000475560 D6R8Y8 96 aa1.59□□□□□ -2.15
SRGAP3-205ENST00000475560 ARMS2P0C7Q2 107 aa1.59□□□□□ -2.15
SRGAP3-205ENST00000475560 SPINK9Q5DT21 86 aa1.59□□□□□ -2.15
SRGAP3-205ENST00000475560 MUSTN1Q8IVN3 82 aa1.59□□□□□ -2.15
SRGAP3-205ENST00000475560 ARHGAP5-AS1Q96IT6 56 aa1.59□□□□□ -2.15
SRGAP3-205ENST00000475560 SPRR4Q96PI1 79 aa1.59□□□□□ -2.15
SRGAP3-205ENST00000475560 TTTY10Q9BZA0 68 aa1.59□□□□□ -2.15
SRGAP3-205ENST00000475560 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.16
SRGAP3-205ENST00000475560 GOLGA4Q13439 2230 aaKnown RBP1.59□□□□□ -2.16
SRGAP3-205ENST00000475560 COL12A1Q99715 3063 aa1.58□□□□□ -2.16
SRGAP3-205ENST00000475560 TENM1Q9UKZ4 2725 aa1.58□□□□□ -2.16
SRGAP3-205ENST00000475560 EPPK1P58107 5090 aaKnown RBP1.58□□□□□ -2.16
SRGAP3-205ENST00000475560 TFF3Q07654 80 aa1.58□□□□□ -2.16
SRGAP3-205ENST00000475560 LINC01590Q5TEZ4 76 aa1.58□□□□□ -2.16
SRGAP3-205ENST00000475560 UBL5Q9BZL1 73 aa1.58□□□□□ -2.16
SRGAP3-205ENST00000475560 COL6A6A6NMZ7 2263 aa1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 FREM2Q5SZK8 3169 aa1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 NBEAQ8NFP9 2946 aa1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 MYO7BQ6PIF6 2116 aa1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 TRBV6-1A0A0K0K1D8 114 aa1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 NDUFB1O75438 58 aa1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 IAPPP10997 89 aa1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 NREPQ16612 68 aa1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 LINC00846Q9NV44 126 aa1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 DSPP15924 2871 aaKnown RBP1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 ABCA1O95477 2261 aa1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 CSMD1Q96PZ7 3565 aa1.57□□□□□ -2.16
SRGAP3-205ENST00000475560 MYO15AQ9UKN7 3530 aa1.56□□□□□ -2.16
SRGAP3-205ENST00000475560 IGIPA6NJ69 53 aa1.56□□□□□ -2.16
SRGAP3-205ENST00000475560 I3L3M4 83 aa1.56□□□□□ -2.16
SRGAP3-205ENST00000475560 M0R1W7 72 aa1.56□□□□□ -2.16
SRGAP3-205ENST00000475560 NDUFA3O95167 84 aa1.56□□□□□ -2.16
SRGAP3-205ENST00000475560 ENHOQ6UWT2 76 aa1.56□□□□□ -2.16
SRGAP3-205ENST00000475560 ROS1P08922 2347 aa1.56□□□□□ -2.16
SRGAP3-205ENST00000475560 FRYLO94915 3013 aa1.56□□□□□ -2.16
SRGAP3-205ENST00000475560 TRIOO75962 3097 aa1.55□□□□□ -2.16
SRGAP3-205ENST00000475560 UTP20O75691 2785 aaKnown RBP1.55□□□□□ -2.16
SRGAP3-205ENST00000475560 MUC2Q02817 5179 aa1.55□□□□□ -2.16
SRGAP3-205ENST00000475560 WNK1Q9H4A3 2382 aa1.55□□□□□ -2.16
SRGAP3-205ENST00000475560 MGAM2Q2M2H8 2515 aa1.55□□□□□ -2.16
SRGAP3-205ENST00000475560 F5P12259 2224 aa1.55□□□□□ -2.16
SRGAP3-205ENST00000475560 KMT2CQ8NEZ4 4911 aaKnown RBP1.55□□□□□ -2.16
SRGAP3-205ENST00000475560 CRYBG3Q68DQ2 2970 aa1.54□□□□□ -2.16
SRGAP3-205ENST00000475560 CSPG4Q6UVK1 2322 aa1.54□□□□□ -2.16
SRGAP3-205ENST00000475560 LCE6AA0A183 80 aa1.54□□□□□ -2.16
SRGAP3-205ENST00000475560 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
SRGAP3-205ENST00000475560 CNFNQ9BYD5 112 aa1.54□□□□□ -2.16
SRGAP3-205ENST00000475560 PDZD2O15018 2839 aa1.53□□□□□ -2.16
SRGAP3-205ENST00000475560 NBASA2RRP1 2371 aa1.53□□□□□ -2.16
SRGAP3-205ENST00000475560 H0YGX0 51 aa1.53□□□□□ -2.16
SRGAP3-205ENST00000475560 CCL22O00626 93 aa1.53□□□□□ -2.16
SRGAP3-205ENST00000475560 DEFB114Q30KQ6 69 aa1.53□□□□□ -2.16
SRGAP3-205ENST00000475560 FDCSPQ8NFU4 85 aa1.53□□□□□ -2.16
SRGAP3-205ENST00000475560 CELSR1Q9NYQ6 3014 aa1.53□□□□□ -2.17
SRGAP3-205ENST00000475560 CELSR2Q9HCU4 2923 aa1.53□□□□□ -2.17
SRGAP3-205ENST00000475560 TRAV21A0A0B4J279 112 aa1.52□□□□□ -2.17
SRGAP3-205ENST00000475560 A0A0D9SG42 100 aa1.52□□□□□ -2.17
SRGAP3-205ENST00000475560 H3BSH0 61 aa1.52□□□□□ -2.17
SRGAP3-205ENST00000475560 HAMPP81172 84 aa1.52□□□□□ -2.17
SRGAP3-205ENST00000475560 C10orf113Q5VZT2 155 aa1.52□□□□□ -2.17
SRGAP3-205ENST00000475560 DEFB106AQ8N104 65 aa1.52□□□□□ -2.17
SRGAP3-205ENST00000475560 SMIM2Q9BVW6 85 aa1.52□□□□□ -2.17
SRGAP3-205ENST00000475560 ASXL3Q9C0F0 2248 aa1.52□□□□□ -2.17
SRGAP3-205ENST00000475560 UBE2DNLQ8IWF7 75 aa1.51□□□□□ -2.17
SRGAP3-205ENST00000475560 WFDC9Q8NEX5 89 aa1.51□□□□□ -2.17
SRGAP3-205ENST00000475560 ZANQ9Y493 2812 aa1.51□□□□□ -2.17
SRGAP3-205ENST00000475560 RYR2Q92736 4967 aa1.51□□□□□ -2.17
SRGAP3-205ENST00000475560 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.5□□□□□ -2.17
SRGAP3-205ENST00000475560 H0Y9P7 68 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms