RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 SPRR1AP35321 89 aa8.71□□□□□ -1.02
SEMA4D-217ENST00000475255 SPRR4Q96PI1 79 aa8.71□□□□□ -1.02
SEMA4D-217ENST00000475255 DNAH10Q8IVF4 4471 aa8.71□□□□□ -1.02
SEMA4D-217ENST00000475255 COL7A1Q02388 2944 aa8.7□□□□□ -1.02
SEMA4D-217ENST00000475255 LINC00588Q9Y4M8 146 aa8.7□□□□□ -1.02
SEMA4D-217ENST00000475255 A8MUN3 132 aa8.7□□□□□ -1.02
SEMA4D-217ENST00000475255 IGFL1Q6UW32 110 aa8.7□□□□□ -1.02
SEMA4D-217ENST00000475255 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
SEMA4D-217ENST00000475255 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
SEMA4D-217ENST00000475255 TENM2Q9NT68 2774 aa8.69□□□□□ -1.02
SEMA4D-217ENST00000475255 LCE6AA0A183 80 aa8.68□□□□□ -1.02
SEMA4D-217ENST00000475255 DNAH10OSP0CZ25 163 aa8.68□□□□□ -1.02
SEMA4D-217ENST00000475255 REG3GQ6UW15 175 aa8.68□□□□□ -1.02
SEMA4D-217ENST00000475255 TLX1NBP0CAT3 122 aa8.66□□□□□ -1.02
SEMA4D-217ENST00000475255 STAB2Q8WWQ8 2551 aa8.66□□□□□ -1.02
SEMA4D-217ENST00000475255 H3BS24 57 aa8.66□□□□□ -1.02
SEMA4D-217ENST00000475255 MP68P56378 58 aa8.66□□□□□ -1.02
SEMA4D-217ENST00000475255 LYSTQ99698 3801 aa8.64□□□□□ -1.03
SEMA4D-217ENST00000475255 PLA2G2DQ9UNK4 145 aa8.64□□□□□ -1.03
SEMA4D-217ENST00000475255 MGAM2Q2M2H8 2515 aa8.63□□□□□ -1.03
SEMA4D-217ENST00000475255 IGLV5-37A0A075B6J1 123 aa8.62□□□□□ -1.03
SEMA4D-217ENST00000475255 CHTF8P0CG12 524 aa8.62□□□□□ -1.03
SEMA4D-217ENST00000475255 KRTAP11-1Q8IUC1 163 aa8.61□□□□□ -1.03
SEMA4D-217ENST00000475255 UBE2AP49459 152 aa8.61□□□□□ -1.03
SEMA4D-217ENST00000475255 SPTSSBQ8NFR3 76 aa8.6□□□□□ -1.03
SEMA4D-217ENST00000475255 H0Y9P7 68 aa8.6□□□□□ -1.03
SEMA4D-217ENST00000475255 Q1T7F1 81 aa8.6□□□□□ -1.03
SEMA4D-217ENST00000475255 A0A1B0GW54 56 aa8.6□□□□□ -1.03
SEMA4D-217ENST00000475255 B9D2Q9BPU9 175 aa8.6□□□□□ -1.03
SEMA4D-217ENST00000475255 H0Y9J4 135 aa8.59□□□□□ -1.03
SEMA4D-217ENST00000475255 CHKB-CPT1BH3BT56 60 aa8.59□□□□□ -1.03
SEMA4D-217ENST00000475255 PMAIP1Q13794 54 aa8.59□□□□□ -1.03
SEMA4D-217ENST00000475255 CASC2Q6XLA1 102 aa8.58□□□□□ -1.04
SEMA4D-217ENST00000475255 DNAH1Q9P2D7 4330 aa8.58□□□□□ -1.04
SEMA4D-217ENST00000475255 PHF5AQ7RTV0 110 aaKnown RBP8.57□□□□□ -1.04
SEMA4D-217ENST00000475255 PCOTHQ58A44 107 aa8.57□□□□□ -1.04
SEMA4D-217ENST00000475255 PRR15LQ9BU68 103 aa8.57□□□□□ -1.04
SEMA4D-217ENST00000475255 KRTAP1-5Q9BYS1 174 aa8.56□□□□□ -1.04
SEMA4D-217ENST00000475255 PRR15Q8IV56 129 aa8.55□□□□□ -1.04
SEMA4D-217ENST00000475255 NDUFB1O75438 58 aa8.54□□□□□ -1.04
SEMA4D-217ENST00000475255 CYP4F30PQ9H0H9 118 aa8.54□□□□□ -1.04
SEMA4D-217ENST00000475255 CNBPP62633 177 aaKnown RBP8.54□□□□□ -1.04
SEMA4D-217ENST00000475255 CMYA5Q8N3K9 4069 aa8.54□□□□□ -1.04
SEMA4D-217ENST00000475255 CD164Q04900 197 aa8.53□□□□□ -1.04
SEMA4D-217ENST00000475255 KRTAP29-1A8MX34 341 aaPredicted RBP8.52□□□□□ -1.04
SEMA4D-217ENST00000475255 DNAH9Q9NYC9 4486 aa8.52□□□□□ -1.05
SEMA4D-217ENST00000475255 Q5VV11 94 aa8.51□□□□□ -1.05
SEMA4D-217ENST00000475255 HUWE1Q7Z6Z7 4374 aaKnown RBP8.5□□□□□ -1.05
SEMA4D-217ENST00000475255 KRTAP24-1Q3LI83 254 aa8.5□□□□□ -1.05
SEMA4D-217ENST00000475255 NDUFS5O43920 106 aa8.48□□□□□ -1.05
SEMA4D-217ENST00000475255 C16orf90A8MZG2 172 aa8.48□□□□□ -1.05
SEMA4D-217ENST00000475255 A6NED7 52 aa8.48□□□□□ -1.05
SEMA4D-217ENST00000475255 IGLV9-49A0A0B4J1Y8 123 aa8.47□□□□□ -1.05
SEMA4D-217ENST00000475255 Q8N9P0 234 aaPredicted RBP8.47□□□□□ -1.05
SEMA4D-217ENST00000475255 A8MWP4 228 aa8.45□□□□□ -1.06
SEMA4D-217ENST00000475255 LINC00472Q9H8W2 130 aa8.45□□□□□ -1.06
SEMA4D-217ENST00000475255 IGLV8-61A0A075B6I0 122 aa8.45□□□□□ -1.06
SEMA4D-217ENST00000475255 SPAG11AQ6PDA7 123 aa8.44□□□□□ -1.06
SEMA4D-217ENST00000475255 PANO1I0J062 215 aa8.43□□□□□ -1.06
SEMA4D-217ENST00000475255 COA5Q86WW8 74 aa8.43□□□□□ -1.06
SEMA4D-217ENST00000475255 MMP24-AS1A0A0U1RRL7 71 aa8.4□□□□□ -1.06
SEMA4D-217ENST00000475255 UBE2DNLQ8IWF7 75 aa8.4□□□□□ -1.06
SEMA4D-217ENST00000475255 C9orf163Q8N9P6 203 aa8.39□□□□□ -1.07
SEMA4D-217ENST00000475255 LIMD2Q9BT23 127 aa8.39□□□□□ -1.07
SEMA4D-217ENST00000475255 IGHV6-1A0A0B4J1U7 121 aa8.38□□□□□ -1.07
SEMA4D-217ENST00000475255 DNAH7Q8WXX0 4024 aa8.38□□□□□ -1.07
SEMA4D-217ENST00000475255 LCA10Q71F78 164 aa8.38□□□□□ -1.07
SEMA4D-217ENST00000475255 ANAPC11Q9NYG5 84 aa8.38□□□□□ -1.07
SEMA4D-217ENST00000475255 K7EIL1 84 aa8.37□□□□□ -1.07
SEMA4D-217ENST00000475255 DNAH3Q8TD57 4116 aa8.37□□□□□ -1.07
SEMA4D-217ENST00000475255 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
SEMA4D-217ENST00000475255 SPRR1BP22528 89 aa8.33□□□□□ -1.08
SEMA4D-217ENST00000475255 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
SEMA4D-217ENST00000475255 PRR26Q8N8Z3 221 aa8.32□□□□□ -1.08
SEMA4D-217ENST00000475255 A0A087X002 238 aa8.32□□□□□ -1.08
SEMA4D-217ENST00000475255 NOTCH2NLQ7Z3S9 236 aa8.32□□□□□ -1.08
SEMA4D-217ENST00000475255 H3BPC8 53 aa8.31□□□□□ -1.08
SEMA4D-217ENST00000475255 RBM12B-AS1Q9P1G2 102 aa8.31□□□□□ -1.08
SEMA4D-217ENST00000475255 MOBPQ13875 183 aa8.31□□□□□ -1.08
SEMA4D-217ENST00000475255 Q96NJ1 140 aa8.31□□□□□ -1.08
SEMA4D-217ENST00000475255 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
SEMA4D-217ENST00000475255 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.29□□□□□ -1.08
SEMA4D-217ENST00000475255 CDK2AP2O75956 126 aa8.28□□□□□ -1.08
SEMA4D-217ENST00000475255 C8orf17Q9NRJ1 99 aa8.28□□□□□ -1.08
SEMA4D-217ENST00000475255 SPINK7P58062 85 aa8.27□□□□□ -1.09
SEMA4D-217ENST00000475255 LOC101927531A0A1B0GV80 90 aa8.26□□□□□ -1.09
SEMA4D-217ENST00000475255 PLECQ15149 4684 aaKnown RBP8.26□□□□□ -1.09
SEMA4D-217ENST00000475255 FRAS1Q86XX4 4008 aa8.25□□□□□ -1.09
SEMA4D-217ENST00000475255 Q75L30 129 aa8.25□□□□□ -1.09
SEMA4D-217ENST00000475255 KTN1-AS1Q86SY8 53 aa8.25□□□□□ -1.09
SEMA4D-217ENST00000475255 RETNLBQ9BQ08 111 aa8.25□□□□□ -1.09
SEMA4D-217ENST00000475255 KRTAP13-1Q8IUC0 172 aa8.24□□□□□ -1.09
SEMA4D-217ENST00000475255 HRES1P13985 223 aa8.23□□□□□ -1.09
SEMA4D-217ENST00000475255 ATP11AUNQ6ZP68 121 aa8.23□□□□□ -1.09
SEMA4D-217ENST00000475255 APLNQ9ULZ1 77 aa8.23□□□□□ -1.09
SEMA4D-217ENST00000475255 C14orf177Q52M58 125 aa8.22□□□□□ -1.09
SEMA4D-217ENST00000475255 A0A1B0GVX0 72 aa8.2□□□□□ -1.1
SEMA4D-217ENST00000475255 TGP01266 2768 aa8.2□□□□□ -1.1
SEMA4D-217ENST00000475255 DNAH8Q96JB1 4490 aa8.2□□□□□ -1.1
SEMA4D-217ENST00000475255 CDC42SE1Q9NRR8 79 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms