RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 PCP2Q8IVA1 136 aa6.52□□□□□ -1.37
SKA3-206ENST00000475251 YPEL4Q96NS1 127 aa6.52□□□□□ -1.37
SKA3-206ENST00000475251 NHP2Q9NX24 153 aaKnown RBP6.52□□□□□ -1.37
SKA3-206ENST00000475251 F8WEM9 126 aa6.51□□□□□ -1.37
SKA3-206ENST00000475251 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
SKA3-206ENST00000475251 TRBV20-1A0A075B6N2 111 aa6.49□□□□□ -1.37
SKA3-206ENST00000475251 COPS9Q8WXC6 57 aa6.49□□□□□ -1.37
SKA3-206ENST00000475251 OBSCN-AS1Q96MR7 158 aa6.49□□□□□ -1.37
SKA3-206ENST00000475251 ZNF815PA8K554 130 aa6.48□□□□□ -1.37
SKA3-206ENST00000475251 TRGC2P03986 189 aa6.48□□□□□ -1.37
SKA3-206ENST00000475251 FCGBPQ9Y6R7 5405 aaPredicted RBP6.46□□□□□ -1.38
SKA3-206ENST00000475251 A6NDN8 102 aa6.46□□□□□ -1.38
SKA3-206ENST00000475251 Q6JHZ5 121 aa6.46□□□□□ -1.38
SKA3-206ENST00000475251 TRBV7-7A0A0K0K1E9 115 aa6.44□□□□□ -1.38
SKA3-206ENST00000475251 CLEC2BQ92478 149 aa6.44□□□□□ -1.38
SKA3-206ENST00000475251 SYS1-DBNDD2H3BUS1 97 aa6.43□□□□□ -1.38
SKA3-206ENST00000475251 IFITM1P13164 125 aa6.43□□□□□ -1.38
SKA3-206ENST00000475251 TMA7Q9Y2S6 64 aaKnown RBP6.43□□□□□ -1.38
SKA3-206ENST00000475251 TRAV13-2A0A0B4J235 113 aa6.42□□□□□ -1.38
SKA3-206ENST00000475251 SCGB1D4Q6XE38 83 aa6.42□□□□□ -1.38
SKA3-206ENST00000475251 Q96NJ1 140 aa6.42□□□□□ -1.38
SKA3-206ENST00000475251 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
SKA3-206ENST00000475251 C9orf118A6NHY6 69 aa6.41□□□□□ -1.38
SKA3-206ENST00000475251 Q6ZVH6 145 aa6.41□□□□□ -1.38
SKA3-206ENST00000475251 VAMP3Q15836 100 aa6.4□□□□□ -1.38
SKA3-206ENST00000475251 SLC7A5P1Q8MH63 180 aa6.4□□□□□ -1.38
SKA3-206ENST00000475251 LINC00846Q9NV44 126 aa6.4□□□□□ -1.38
SKA3-206ENST00000475251 LST1O00453 97 aa6.39□□□□□ -1.39
SKA3-206ENST00000475251 LINC01545Q5VT33 79 aa6.39□□□□□ -1.39
SKA3-206ENST00000475251 IGFL1Q6UW32 110 aa6.39□□□□□ -1.39
SKA3-206ENST00000475251 TTTY13Q9BZ97 58 aa6.39□□□□□ -1.39
SKA3-206ENST00000475251 SYNE2Q8WXH0 6885 aaKnown RBP6.38□□□□□ -1.39
SKA3-206ENST00000475251 MT2AP02795 61 aa6.38□□□□□ -1.39
SKA3-206ENST00000475251 C21orf62-AS1Q17RA5 79 aa6.38□□□□□ -1.39
SKA3-206ENST00000475251 PET117Q6UWS5 81 aa6.38□□□□□ -1.39
SKA3-206ENST00000475251 SMIM11BQ8TCY0 68 aa6.38□□□□□ -1.39
SKA3-206ENST00000475251 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
SKA3-206ENST00000475251 OCIAD2Q56VL3 154 aa6.37□□□□□ -1.39
SKA3-206ENST00000475251 MACF1Q9UPN3 7388 aaKnown RBP6.37□□□□□ -1.39
SKA3-206ENST00000475251 FAM236DA0A1B0GTK5 79 aa6.36□□□□□ -1.39
SKA3-206ENST00000475251 A8MUU9 505 aa6.36□□□□□ -1.39
SKA3-206ENST00000475251 FAM236CP0DP71 79 aa6.36□□□□□ -1.39
SKA3-206ENST00000475251 Q6ZQY7 126 aa6.36□□□□□ -1.39
SKA3-206ENST00000475251 SS18L2Q9UHA2 77 aa6.36□□□□□ -1.39
SKA3-206ENST00000475251 hADV29S1A0JD25 119 aa6.35□□□□□ -1.39
SKA3-206ENST00000475251 LINC00575Q6W349 94 aa6.35□□□□□ -1.39
SKA3-206ENST00000475251 MUSTN1Q8IVN3 82 aa6.35□□□□□ -1.39
SKA3-206ENST00000475251 SCGB1D1O95968 90 aa6.34□□□□□ -1.39
SKA3-206ENST00000475251 MT1FP04733 61 aa6.33□□□□□ -1.4
SKA3-206ENST00000475251 KRTAP10-10P60014 251 aa6.33□□□□□ -1.4
SKA3-206ENST00000475251 PPDPFLQ8WWR9 84 aa6.33□□□□□ -1.4
SKA3-206ENST00000475251 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.31□□□□□ -1.4
SKA3-206ENST00000475251 SNHG12Q9BXW3 62 aa6.31□□□□□ -1.4
SKA3-206ENST00000475251 RBM12B-AS1Q9P1G2 102 aa6.31□□□□□ -1.4
SKA3-206ENST00000475251 C3orf79P0CE67 100 aa6.28□□□□□ -1.4
SKA3-206ENST00000475251 COLCA2A8K830 154 aa6.27□□□□□ -1.41
SKA3-206ENST00000475251 H3BUT2 72 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 HIST1H2BKO60814 126 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 HIST1H2BJP06899 126 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 HIST1H2BOP23527 126 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 HIST1H2BBP33778 126 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 HIST1H2BDP58876 126 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 KRTDAPP60985 99 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 HIST1H2BCP62807 126 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 HIST2H2BEQ16778 126 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.25□□□□□ -1.41
SKA3-206ENST00000475251 BVES-AS1Q5T3Y7 98 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 TEN1Q86WV5 123 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 HIST1H2BHQ93079 126 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 HIST1H2BNQ99877 126 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 HIST1H2BMQ99879 126 aa6.25□□□□□ -1.41
SKA3-206ENST00000475251 KRTAP19-6Q3LI70 58 aa6.24□□□□□ -1.41
SKA3-206ENST00000475251 DSCR10P59022 87 aa6.23□□□□□ -1.41
SKA3-206ENST00000475251 MPLKIPQ8TAP9 179 aa6.23□□□□□ -1.41
SKA3-206ENST00000475251 A0A087WSZ3 146 aa6.22□□□□□ -1.41
SKA3-206ENST00000475251 MTURNQ8N3F0 131 aa6.22□□□□□ -1.41
SKA3-206ENST00000475251 C12orf57Q99622 126 aa6.22□□□□□ -1.41
SKA3-206ENST00000475251 SNCGO76070 127 aa6.21□□□□□ -1.42
SKA3-206ENST00000475251 HRES1P13985 223 aa6.21□□□□□ -1.42
SKA3-206ENST00000475251 SNRPEP62304 92 aaKnown RBP6.21□□□□□ -1.42
SKA3-206ENST00000475251 LINC00313P59037 77 aa6.2□□□□□ -1.42
SKA3-206ENST00000475251 SIGMAR1Q99720 223 aa6.2□□□□□ -1.42
SKA3-206ENST00000475251 KRTAP16-1A8MUX0 517 aa6.19□□□□□ -1.42
SKA3-206ENST00000475251 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
SKA3-206ENST00000475251 NDUFV3P56181 108 aaKnown RBP6.17□□□□□ -1.42
SKA3-206ENST00000475251 KRTAP6-3Q3LI67 103 aa6.17□□□□□ -1.42
SKA3-206ENST00000475251 COA6Q5JTJ3 125 aaKnown RBP6.15□□□□□ -1.42
SKA3-206ENST00000475251 NOTCH2NLQ7Z3S9 236 aa6.15□□□□□ -1.42
SKA3-206ENST00000475251 H3BMG7 143 aa6.13□□□□□ -1.43
SKA3-206ENST00000475251 IGKV4-1P06312 121 aa6.13□□□□□ -1.43
SKA3-206ENST00000475251 A8MWP4 228 aa6.12□□□□□ -1.43
SKA3-206ENST00000475251 HSBP1L1C9JCN9 74 aa6.11□□□□□ -1.43
SKA3-206ENST00000475251 H0YGX0 51 aa6.11□□□□□ -1.43
SKA3-206ENST00000475251 HIST1H4GQ99525 98 aa6.09□□□□□ -1.43
SKA3-206ENST00000475251 TRBV7-4A0A0J9YYF1 115 aa6.07□□□□□ -1.44
SKA3-206ENST00000475251 A0A1W2PNM2 257 aa6.07□□□□□ -1.44
SKA3-206ENST00000475251 FABP2P12104 132 aa6.07□□□□□ -1.44
SKA3-206ENST00000475251 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
SKA3-206ENST00000475251 A0A1B0GX51 115 aa6.06□□□□□ -1.44
SKA3-206ENST00000475251 RAB37Q96AX2 223 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms