RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 TCL1BO95988 128 aa13.13□□□□□ -0.31
TMEM54-205ENST00000475208 A4D1N5 150 aa13.1□□□□□ -0.31
TMEM54-205ENST00000475208 S100A6P06703 90 aa13.09□□□□□ -0.31
TMEM54-205ENST00000475208 NHP2Q9NX24 153 aaKnown RBP13.09□□□□□ -0.31
TMEM54-205ENST00000475208 TRAV13-2A0A0B4J235 113 aa13.08□□□□□ -0.32
TMEM54-205ENST00000475208 HSBP1L1C9JCN9 74 aa13.07□□□□□ -0.32
TMEM54-205ENST00000475208 SMIM11BQ8TCY0 68 aa13.06□□□□□ -0.32
TMEM54-205ENST00000475208 F8WEM9 126 aa13.04□□□□□ -0.32
TMEM54-205ENST00000475208 Q6Q795 121 aa12.99□□□□□ -0.33
TMEM54-205ENST00000475208 SCGB1D1O95968 90 aa12.97□□□□□ -0.33
TMEM54-205ENST00000475208 TRBV7-7A0A0K0K1E9 115 aa12.95□□□□□ -0.34
TMEM54-205ENST00000475208 ATP11AUNQ6ZP68 121 aa12.95□□□□□ -0.34
TMEM54-205ENST00000475208 OBSCN-AS1Q96MR7 158 aa12.95□□□□□ -0.34
TMEM54-205ENST00000475208 Q6JHZ5 121 aa12.94□□□□□ -0.34
TMEM54-205ENST00000475208 Q75L30 129 aa12.94□□□□□ -0.34
TMEM54-205ENST00000475208 CLEC2BQ92478 149 aa12.94□□□□□ -0.34
TMEM54-205ENST00000475208 VAMP3Q15836 100 aa12.93□□□□□ -0.34
TMEM54-205ENST00000475208 LINC00575Q6W349 94 aa12.93□□□□□ -0.34
TMEM54-205ENST00000475208 COX8AP10176 69 aa12.92□□□□□ -0.34
TMEM54-205ENST00000475208 IGFL1Q6UW32 110 aa12.92□□□□□ -0.34
TMEM54-205ENST00000475208 Q6ZQY7 126 aa12.92□□□□□ -0.34
TMEM54-205ENST00000475208 HIST1H4GQ99525 98 aa12.89□□□□□ -0.35
TMEM54-205ENST00000475208 hADV29S1A0JD25 119 aa12.88□□□□□ -0.35
TMEM54-205ENST00000475208 DLEU1O43261 78 aa12.88□□□□□ -0.35
TMEM54-205ENST00000475208 OCIAD2Q56VL3 154 aa12.86□□□□□ -0.35
TMEM54-205ENST00000475208 C12orf57Q99622 126 aa12.86□□□□□ -0.35
TMEM54-205ENST00000475208 C14orf144Q96I85 54 aa12.81□□□□□ -0.36
TMEM54-205ENST00000475208 Q96NJ1 140 aa12.8□□□□□ -0.36
TMEM54-205ENST00000475208 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.79□□□□□ -0.36
TMEM54-205ENST00000475208 LST1O00453 97 aa12.79□□□□□ -0.36
TMEM54-205ENST00000475208 CFC1P0CG37 223 aa12.79□□□□□ -0.36
TMEM54-205ENST00000475208 BVES-AS1Q5T3Y7 98 aa12.78□□□□□ -0.36
TMEM54-205ENST00000475208 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.78□□□□□ -0.36
TMEM54-205ENST00000475208 PAM16Q9Y3D7 125 aa12.78□□□□□ -0.36
TMEM54-205ENST00000475208 SPATA45Q537H7 98 aa12.77□□□□□ -0.37
TMEM54-205ENST00000475208 HIGD1BQ9P298 99 aa12.77□□□□□ -0.37
TMEM54-205ENST00000475208 KRTAP9-7A8MTY7 169 aa12.76□□□□□ -0.37
TMEM54-205ENST00000475208 KRTAP9-8Q9BYQ0 159 aa12.76□□□□□ -0.37
TMEM54-205ENST00000475208 USH2AO75445 5202 aa12.76□□□□□ -0.37
TMEM54-205ENST00000475208 H3BUT2 72 aa12.75□□□□□ -0.37
TMEM54-205ENST00000475208 PPDPFLQ8WWR9 84 aa12.75□□□□□ -0.37
TMEM54-205ENST00000475208 SNHG12Q9BXW3 62 aa12.74□□□□□ -0.37
TMEM54-205ENST00000475208 SSPOA2VEC9 5147 aa12.74□□□□□ -0.37
TMEM54-205ENST00000475208 C2orf91Q6ZV80 131 aa12.73□□□□□ -0.37
TMEM54-205ENST00000475208 VAMP8Q9BV40 100 aa12.73□□□□□ -0.37
TMEM54-205ENST00000475208 C20orf166-AS1Q96NR2 134 aa12.72□□□□□ -0.37
TMEM54-205ENST00000475208 RAB37Q96AX2 223 aa12.7□□□□□ -0.38
TMEM54-205ENST00000475208 A0A0B4J2C4 111 aa12.69□□□□□ -0.38
TMEM54-205ENST00000475208 A8MUU9 505 aa12.69□□□□□ -0.38
TMEM54-205ENST00000475208 SS18L2Q9UHA2 77 aa12.69□□□□□ -0.38
TMEM54-205ENST00000475208 TRBV20-1A0A075B6N2 111 aa12.68□□□□□ -0.38
TMEM54-205ENST00000475208 CEND1Q8N111 149 aa12.64□□□□□ -0.39
TMEM54-205ENST00000475208 H0YGX0 51 aa12.63□□□□□ -0.39
TMEM54-205ENST00000475208 FAM218AQ96MZ4 157 aa12.62□□□□□ -0.39
TMEM54-205ENST00000475208 TEN1Q86WV5 123 aa12.59□□□□□ -0.39
TMEM54-205ENST00000475208 PRO1854Q9UHT4 67 aa12.59□□□□□ -0.39
TMEM54-205ENST00000475208 SNCGO76070 127 aa12.58□□□□□ -0.4
TMEM54-205ENST00000475208 A0A087WSZ3 146 aa12.57□□□□□ -0.4
TMEM54-205ENST00000475208 FXYD2P54710 66 aa12.57□□□□□ -0.4
TMEM54-205ENST00000475208 TMEM238LA0A1B0GVL6 79 aa12.56□□□□□ -0.4
TMEM54-205ENST00000475208 A6NJY4 79 aa12.56□□□□□ -0.4
TMEM54-205ENST00000475208 DSCR10P59022 87 aa12.56□□□□□ -0.4
TMEM54-205ENST00000475208 PYY3Q5JQD4 70 aa12.56□□□□□ -0.4
TMEM54-205ENST00000475208 MT2AP02795 61 aa12.55□□□□□ -0.4
TMEM54-205ENST00000475208 NDUFV3P56181 108 aaKnown RBP12.53□□□□□ -0.4
TMEM54-205ENST00000475208 A0A1B0GX51 115 aa12.52□□□□□ -0.41
TMEM54-205ENST00000475208 FCGBPQ9Y6R7 5405 aaPredicted RBP12.52□□□□□ -0.41
TMEM54-205ENST00000475208 FAM236DA0A1B0GTK5 79 aa12.51□□□□□ -0.41
TMEM54-205ENST00000475208 FAM236CP0DP71 79 aa12.51□□□□□ -0.41
TMEM54-205ENST00000475208 TRIAP1O43715 76 aa12.49□□□□□ -0.41
TMEM54-205ENST00000475208 SIGMAR1Q99720 223 aa12.49□□□□□ -0.41
TMEM54-205ENST00000475208 KRTAP16-1A8MUX0 517 aa12.47□□□□□ -0.41
TMEM54-205ENST00000475208 HSD52Q0P140 79 aa12.47□□□□□ -0.41
TMEM54-205ENST00000475208 MT1FP04733 61 aa12.46□□□□□ -0.41
TMEM54-205ENST00000475208 H3BMG7 143 aa12.45□□□□□ -0.42
TMEM54-205ENST00000475208 GHRHP01286 108 aa12.45□□□□□ -0.42
TMEM54-205ENST00000475208 LCE2BO14633 110 aa12.44□□□□□ -0.42
TMEM54-205ENST00000475208 FABP2P12104 132 aa12.43□□□□□ -0.42
TMEM54-205ENST00000475208 KRTAP19-1Q8IUB9 90 aa12.42□□□□□ -0.42
TMEM54-205ENST00000475208 K7ERJ3 54 aa12.41□□□□□ -0.42
TMEM54-205ENST00000475208 LINC00313P59037 77 aa12.41□□□□□ -0.42
TMEM54-205ENST00000475208 A0A1W2PNM2 257 aa12.4□□□□□ -0.42
TMEM54-205ENST00000475208 RBM12B-AS1Q9P1G2 102 aa12.4□□□□□ -0.42
TMEM54-205ENST00000475208 TMA7Q9Y2S6 64 aaKnown RBP12.4□□□□□ -0.42
TMEM54-205ENST00000475208 HRES1P13985 223 aa12.39□□□□□ -0.43
TMEM54-205ENST00000475208 MPLKIPQ8TAP9 179 aa12.39□□□□□ -0.43
TMEM54-205ENST00000475208 IGKV4-1P06312 121 aa12.37□□□□□ -0.43
TMEM54-205ENST00000475208 KRTAP10-10P60014 251 aa12.37□□□□□ -0.43
TMEM54-205ENST00000475208 KRTAP9-3Q9BYQ3 159 aa12.37□□□□□ -0.43
TMEM54-205ENST00000475208 UQCR10Q9UDW1 63 aa12.37□□□□□ -0.43
TMEM54-205ENST00000475208 PSMB2P49721 201 aa12.36□□□□□ -0.43
TMEM54-205ENST00000475208 DNAL4O96015 105 aa12.33□□□□□ -0.44
TMEM54-205ENST00000475208 NOTCH2NLQ7Z3S9 236 aa12.33□□□□□ -0.44
TMEM54-205ENST00000475208 ORMDL1Q9P0S3 153 aa12.33□□□□□ -0.44
TMEM54-205ENST00000475208 COX6CP09669 75 aa12.32□□□□□ -0.44
TMEM54-205ENST00000475208 H3BQ85 93 aa12.31□□□□□ -0.44
TMEM54-205ENST00000475208 MACF1Q9UPN3 7388 aaKnown RBP12.29□□□□□ -0.44
TMEM54-205ENST00000475208 TRBV7-4A0A0J9YYF1 115 aa12.28□□□□□ -0.44
TMEM54-205ENST00000475208 TMEM256-PLSCR3K7ERE1 68 aa12.28□□□□□ -0.44
TMEM54-205ENST00000475208 ANKRD29Q8N6D5 301 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms