RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 CRYGAP11844 174 aa13.48□□□□□ -0.25
CCM2-206ENST00000474617 ZNF706Q9Y5V0 76 aaPredicted RBP13.46□□□□□ -0.25
CCM2-206ENST00000474617 ALMS1Q8TCU4 4167 aa13.45□□□□□ -0.26
CCM2-206ENST00000474617 UQCRQO14949 82 aa13.44□□□□□ -0.26
CCM2-206ENST00000474617 A0A087WVE0 104 aa13.43□□□□□ -0.26
CCM2-206ENST00000474617 SMIM20Q8N5G0 67 aa13.43□□□□□ -0.26
CCM2-206ENST00000474617 HECTD4Q9Y4D8 3996 aa13.42□□□□□ -0.26
CCM2-206ENST00000474617 BPY2O14599 106 aa13.42□□□□□ -0.26
CCM2-206ENST00000474617 DNAH17Q9UFH2 4485 aa13.4□□□□□ -0.26
CCM2-206ENST00000474617 KMT2AQ03164 3969 aa13.4□□□□□ -0.26
CCM2-206ENST00000474617 COX7CP15954 63 aa13.4□□□□□ -0.26
CCM2-206ENST00000474617 RPL37AP61513 92 aaKnown RBP13.4□□□□□ -0.26
CCM2-206ENST00000474617 IGFL1Q6UW32 110 aa13.4□□□□□ -0.26
CCM2-206ENST00000474617 DNAH2Q9P225 4427 aa13.39□□□□□ -0.27
CCM2-206ENST00000474617 SERP2Q8N6R1 65 aa13.39□□□□□ -0.27
CCM2-206ENST00000474617 TGP01266 2768 aa13.36□□□□□ -0.27
CCM2-206ENST00000474617 LINC00483Q53H64 154 aa13.36□□□□□ -0.27
CCM2-206ENST00000474617 CCDC179H3BU77 68 aa13.35□□□□□ -0.27
CCM2-206ENST00000474617 PSORS1C2Q9UIG4 136 aa13.35□□□□□ -0.27
CCM2-206ENST00000474617 ZNF861PO60384 105 aa13.34□□□□□ -0.27
CCM2-206ENST00000474617 IGKV4-1P06312 121 aa13.28□□□□□ -0.28
CCM2-206ENST00000474617 C9orf153Q5TBE3 101 aa13.28□□□□□ -0.28
CCM2-206ENST00000474617 SCXQ7RTU7 201 aa13.27□□□□□ -0.29
CCM2-206ENST00000474617 TRAV7A0A075B6U4 112 aa13.26□□□□□ -0.29
CCM2-206ENST00000474617 Q6ZSA8 131 aa13.26□□□□□ -0.29
CCM2-206ENST00000474617 IGLV7-43P04211 117 aa13.23□□□□□ -0.29
CCM2-206ENST00000474617 KRTAP10-2P60368 255 aa13.23□□□□□ -0.29
CCM2-206ENST00000474617 A0A087WSZ3 146 aa13.22□□□□□ -0.29
CCM2-206ENST00000474617 FRAS1Q86XX4 4008 aa13.19□□□□□ -0.3
CCM2-206ENST00000474617 CIRBP-AS1Q8TBR5 109 aa13.18□□□□□ -0.3
CCM2-206ENST00000474617 LINC00336Q6ZUF6 198 aa13.17□□□□□ -0.3
CCM2-206ENST00000474617 J3KT08 172 aa13.16□□□□□ -0.3
CCM2-206ENST00000474617 DSCR10P59022 87 aa13.16□□□□□ -0.3
CCM2-206ENST00000474617 SS18L2Q9UHA2 77 aa13.16□□□□□ -0.3
CCM2-206ENST00000474617 Q8N9L7 120 aa13.13□□□□□ -0.31
CCM2-206ENST00000474617 IGLV9-49A0A0B4J1Y8 123 aa13.12□□□□□ -0.31
CCM2-206ENST00000474617 FAM30AQ9NZY2 134 aa13.12□□□□□ -0.31
CCM2-206ENST00000474617 A0A0G2JQZ4 141 aa13.11□□□□□ -0.31
CCM2-206ENST00000474617 LCE6AA0A183 80 aa13.1□□□□□ -0.31
CCM2-206ENST00000474617 KRTAP10-1P60331 282 aa13.1□□□□□ -0.31
CCM2-206ENST00000474617 DNAH8Q96JB1 4490 aa13.09□□□□□ -0.31
CCM2-206ENST00000474617 DNAH11Q96DT5 4516 aa13.09□□□□□ -0.31
CCM2-206ENST00000474617 LINC00472Q9H8W2 130 aa13.08□□□□□ -0.31
CCM2-206ENST00000474617 K7EQZ3 153 aa13.08□□□□□ -0.32
CCM2-206ENST00000474617 SRRM2Q9UQ35 2752 aaKnown RBP13.06□□□□□ -0.32
CCM2-206ENST00000474617 HCG22E2RYF7 251 aa13.05□□□□□ -0.32
CCM2-206ENST00000474617 DNAH5Q8TE73 4624 aa13.05□□□□□ -0.32
CCM2-206ENST00000474617 A8MWP4 228 aa13.04□□□□□ -0.32
CCM2-206ENST00000474617 CD164Q04900 197 aa13.04□□□□□ -0.32
CCM2-206ENST00000474617 MOBPQ13875 183 aa13.04□□□□□ -0.32
CCM2-206ENST00000474617 SSBP3-AS1Q7Z2R9 100 aa13.04□□□□□ -0.32
CCM2-206ENST00000474617 OCR1Q9BZK8 76 aa13.04□□□□□ -0.32
CCM2-206ENST00000474617 KLKP1Q107X0 134 aa13.03□□□□□ -0.32
CCM2-206ENST00000474617 TMEM258P61165 79 aa13.03□□□□□ -0.32
CCM2-206ENST00000474617 FAM229BQ4G0N7 80 aa13.02□□□□□ -0.33
CCM2-206ENST00000474617 FAT2Q9NYQ8 4349 aa13.01□□□□□ -0.33
CCM2-206ENST00000474617 PRR15Q8IV56 129 aa13.01□□□□□ -0.33
CCM2-206ENST00000474617 NDUFC1O43677 76 aa13□□□□□ -0.33
CCM2-206ENST00000474617 NDUFB1O75438 58 aa13□□□□□ -0.33
CCM2-206ENST00000474617 C20orf197Q8N268 126 aa13□□□□□ -0.33
CCM2-206ENST00000474617 PKD1P98161 4303 aa12.99□□□□□ -0.33
CCM2-206ENST00000474617 DEFB116Q30KQ4 102 aa12.93□□□□□ -0.34
CCM2-206ENST00000474617 TMEM254Q8TBM7 123 aa12.92□□□□□ -0.34
CCM2-206ENST00000474617 HYDINQ4G0P3 5121 aa12.91□□□□□ -0.34
CCM2-206ENST00000474617 Q96NJ1 140 aa12.9□□□□□ -0.34
CCM2-206ENST00000474617 ANAPC11Q9NYG5 84 aa12.9□□□□□ -0.34
CCM2-206ENST00000474617 ASB16-AS1Q495Z4 193 aa12.89□□□□□ -0.35
CCM2-206ENST00000474617 KRTAP29-1A8MX34 341 aaPredicted RBP12.88□□□□□ -0.35
CCM2-206ENST00000474617 C5orf47Q569G3 176 aa12.88□□□□□ -0.35
CCM2-206ENST00000474617 CASC2Q6XLA1 102 aa12.88□□□□□ -0.35
CCM2-206ENST00000474617 CDK2AP2O75956 126 aa12.87□□□□□ -0.35
CCM2-206ENST00000474617 CYSTM1Q9H1C7 97 aa12.86□□□□□ -0.35
CCM2-206ENST00000474617 HRCT1Q6UXD1 115 aa12.85□□□□□ -0.35
CCM2-206ENST00000474617 SACSQ9NZJ4 4579 aa12.85□□□□□ -0.35
CCM2-206ENST00000474617 A0A0U1RQV1 116 aa12.83□□□□□ -0.35
CCM2-206ENST00000474617 A0A1B0GVY2 172 aa12.83□□□□□ -0.35
CCM2-206ENST00000474617 H7BZZ5 65 aa12.83□□□□□ -0.35
CCM2-206ENST00000474617 Q5XG85 94 aa12.83□□□□□ -0.35
CCM2-206ENST00000474617 ATP5EP56381 51 aaPredicted RBP12.83□□□□□ -0.36
CCM2-206ENST00000474617 WFDC13Q8IUB5 93 aa12.82□□□□□ -0.36
CCM2-206ENST00000474617 RPS28P62857 69 aaKnown RBP12.81□□□□□ -0.36
CCM2-206ENST00000474617 SPINK6Q6UWN8 80 aa12.81□□□□□ -0.36
CCM2-206ENST00000474617 MMP24-AS1A0A0U1RRL7 71 aa12.79□□□□□ -0.36
CCM2-206ENST00000474617 A0A1B0GVX0 72 aa12.79□□□□□ -0.36
CCM2-206ENST00000474617 SNURFQ9Y675 71 aa12.79□□□□□ -0.36
CCM2-206ENST00000474617 H3BPC8 53 aa12.78□□□□□ -0.36
CCM2-206ENST00000474617 hDV103S1A0JD37 113 aa12.77□□□□□ -0.37
CCM2-206ENST00000474617 FAM236DA0A1B0GTK5 79 aa12.76□□□□□ -0.37
CCM2-206ENST00000474617 FAM236CP0DP71 79 aa12.76□□□□□ -0.37
CCM2-206ENST00000474617 MP68P56378 58 aa12.76□□□□□ -0.37
CCM2-206ENST00000474617 TP53AIP1Q9HCN2 124 aa12.76□□□□□ -0.37
CCM2-206ENST00000474617 KRTAP1-4P0C5Y4 121 aa12.75□□□□□ -0.37
CCM2-206ENST00000474617 C8orf17Q9NRJ1 99 aa12.74□□□□□ -0.37
CCM2-206ENST00000474617 A0A087X002 238 aa12.73□□□□□ -0.37
CCM2-206ENST00000474617 KRTAP13-2Q52LG2 175 aa12.73□□□□□ -0.37
CCM2-206ENST00000474617 LIMD2Q9BT23 127 aa12.73□□□□□ -0.37
CCM2-206ENST00000474617 LRP1BQ9NZR2 4599 aa12.73□□□□□ -0.37
CCM2-206ENST00000474617 C8orf87E5RJ46 101 aa12.69□□□□□ -0.38
CCM2-206ENST00000474617 ZCCHC13Q8WW36 166 aaKnown RBP12.69□□□□□ -0.38
CCM2-206ENST00000474617 PLA2G1BP04054 148 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms