RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SERP2Q8N6R1 65 aa6.05□□□□□ -1.44
USP39-214ENST00000474572 WWC2-AS2Q96NR7 200 aa6.05□□□□□ -1.44
USP39-214ENST00000474572 PLAC8Q9NZF1 115 aa6.05□□□□□ -1.44
USP39-214ENST00000474572 C3orf84H3BNL1 204 aa6.04□□□□□ -1.44
USP39-214ENST00000474572 IGKV4-1P06312 121 aa6.03□□□□□ -1.44
USP39-214ENST00000474572 UBE2AP49459 152 aa6.03□□□□□ -1.44
USP39-214ENST00000474572 SMIM20Q8N5G0 67 aa6.03□□□□□ -1.44
USP39-214ENST00000474572 ALMS1Q8TCU4 4167 aa6.03□□□□□ -1.44
USP39-214ENST00000474572 LY6G6CO95867 125 aa6.02□□□□□ -1.45
USP39-214ENST00000474572 SCXQ7RTU7 201 aa6.02□□□□□ -1.45
USP39-214ENST00000474572 IGLV5-52A0A0A0MRZ9 124 aa6.01□□□□□ -1.45
USP39-214ENST00000474572 BPY2O14599 106 aa6.01□□□□□ -1.45
USP39-214ENST00000474572 C9orf153Q5TBE3 101 aa6.01□□□□□ -1.45
USP39-214ENST00000474572 LINC00483Q53H64 154 aa6□□□□□ -1.45
USP39-214ENST00000474572 TENM2Q9NT68 2774 aa6□□□□□ -1.45
USP39-214ENST00000474572 TRAV7A0A075B6U4 112 aa5.99□□□□□ -1.45
USP39-214ENST00000474572 DPH3Q96FX2 82 aa5.98□□□□□ -1.45
USP39-214ENST00000474572 PSORS1C2Q9UIG4 136 aa5.98□□□□□ -1.45
USP39-214ENST00000474572 DSCR10P59022 87 aa5.97□□□□□ -1.45
USP39-214ENST00000474572 A0A0G2JQZ4 141 aa5.96□□□□□ -1.46
USP39-214ENST00000474572 RPL37AP61513 92 aaKnown RBP5.96□□□□□ -1.46
USP39-214ENST00000474572 Q8N9L7 120 aa5.96□□□□□ -1.46
USP39-214ENST00000474572 ZNF706Q9Y5V0 76 aaPredicted RBP5.96□□□□□ -1.46
USP39-214ENST00000474572 DNAH8Q96JB1 4490 aa5.96□□□□□ -1.46
USP39-214ENST00000474572 FBN3Q75N90 2809 aa5.96□□□□□ -1.46
USP39-214ENST00000474572 ZNF861PO60384 105 aa5.95□□□□□ -1.46
USP39-214ENST00000474572 KMT2AQ03164 3969 aa5.95□□□□□ -1.46
USP39-214ENST00000474572 SS18L2Q9UHA2 77 aa5.95□□□□□ -1.46
USP39-214ENST00000474572 HECTD4Q9Y4D8 3996 aa5.94□□□□□ -1.46
USP39-214ENST00000474572 A0A087WSZ3 146 aa5.94□□□□□ -1.46
USP39-214ENST00000474572 KRTAP10-2P60368 255 aa5.94□□□□□ -1.46
USP39-214ENST00000474572 Q6ZSA8 131 aa5.94□□□□□ -1.46
USP39-214ENST00000474572 CYSTM1Q9H1C7 97 aa5.94□□□□□ -1.46
USP39-214ENST00000474572 DNAH11Q96DT5 4516 aa5.94□□□□□ -1.46
USP39-214ENST00000474572 K7EQZ3 153 aa5.92□□□□□ -1.46
USP39-214ENST00000474572 OCR1Q9BZK8 76 aa5.92□□□□□ -1.46
USP39-214ENST00000474572 IGLV7-43P04211 117 aa5.91□□□□□ -1.46
USP39-214ENST00000474572 KLKP1Q107X0 134 aa5.91□□□□□ -1.46
USP39-214ENST00000474572 TMEM258P61165 79 aa5.9□□□□□ -1.46
USP39-214ENST00000474572 CIRBP-AS1Q8TBR5 109 aa5.9□□□□□ -1.46
USP39-214ENST00000474572 LINC00472Q9H8W2 130 aa5.9□□□□□ -1.46
USP39-214ENST00000474572 FAM30AQ9NZY2 134 aa5.9□□□□□ -1.46
USP39-214ENST00000474572 DNAH5Q8TE73 4624 aa5.9□□□□□ -1.47
USP39-214ENST00000474572 FRAS1Q86XX4 4008 aa5.9□□□□□ -1.47
USP39-214ENST00000474572 C20orf197Q8N268 126 aa5.89□□□□□ -1.47
USP39-214ENST00000474572 LCE6AA0A183 80 aa5.88□□□□□ -1.47
USP39-214ENST00000474572 IGLV9-49A0A0B4J1Y8 123 aa5.87□□□□□ -1.47
USP39-214ENST00000474572 KRTAP10-1P60331 282 aa5.87□□□□□ -1.47
USP39-214ENST00000474572 HCG22E2RYF7 251 aa5.86□□□□□ -1.47
USP39-214ENST00000474572 J3KT08 172 aa5.86□□□□□ -1.47
USP39-214ENST00000474572 NDUFC1O43677 76 aa5.86□□□□□ -1.47
USP39-214ENST00000474572 Q96NJ1 140 aa5.86□□□□□ -1.47
USP39-214ENST00000474572 PKD1P98161 4303 aa5.85□□□□□ -1.47
USP39-214ENST00000474572 A8MWP4 228 aa5.85□□□□□ -1.47
USP39-214ENST00000474572 KRTAP29-1A8MX34 341 aaPredicted RBP5.85□□□□□ -1.47
USP39-214ENST00000474572 H7BZZ5 65 aa5.85□□□□□ -1.47
USP39-214ENST00000474572 MOBPQ13875 183 aa5.85□□□□□ -1.47
USP39-214ENST00000474572 FAT2Q9NYQ8 4349 aa5.85□□□□□ -1.47
USP39-214ENST00000474572 A0A0U1RQV1 116 aa5.84□□□□□ -1.47
USP39-214ENST00000474572 DEFB116Q30KQ4 102 aa5.84□□□□□ -1.47
USP39-214ENST00000474572 PRR15Q8IV56 129 aa5.84□□□□□ -1.47
USP39-214ENST00000474572 HYDINQ4G0P3 5121 aa5.83□□□□□ -1.48
USP39-214ENST00000474572 TMEM254Q8TBM7 123 aa5.83□□□□□ -1.48
USP39-214ENST00000474572 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
USP39-214ENST00000474572 ANAPC11Q9NYG5 84 aa5.82□□□□□ -1.48
USP39-214ENST00000474572 RPS28P62857 69 aaKnown RBP5.81□□□□□ -1.48
USP39-214ENST00000474572 CD164Q04900 197 aa5.81□□□□□ -1.48
USP39-214ENST00000474572 SSBP3-AS1Q7Z2R9 100 aa5.81□□□□□ -1.48
USP39-214ENST00000474572 SNURFQ9Y675 71 aa5.81□□□□□ -1.48
USP39-214ENST00000474572 MMP24-AS1A0A0U1RRL7 71 aa5.8□□□□□ -1.48
USP39-214ENST00000474572 ASB16-AS1Q495Z4 193 aa5.8□□□□□ -1.48
USP39-214ENST00000474572 FAM229BQ4G0N7 80 aa5.79□□□□□ -1.48
USP39-214ENST00000474572 LINC00336Q6ZUF6 198 aa5.79□□□□□ -1.48
USP39-214ENST00000474572 ZCCHC13Q8WW36 166 aaKnown RBP5.79□□□□□ -1.48
USP39-214ENST00000474572 TGP01266 2768 aa5.79□□□□□ -1.48
USP39-214ENST00000474572 FAM236DA0A1B0GTK5 79 aa5.78□□□□□ -1.48
USP39-214ENST00000474572 FAM236CP0DP71 79 aa5.78□□□□□ -1.48
USP39-214ENST00000474572 CASC2Q6XLA1 102 aa5.78□□□□□ -1.48
USP39-214ENST00000474572 WFDC13Q8IUB5 93 aa5.78□□□□□ -1.48
USP39-214ENST00000474572 SACSQ9NZJ4 4579 aa5.78□□□□□ -1.48
USP39-214ENST00000474572 SRRM2Q9UQ35 2752 aaKnown RBP5.78□□□□□ -1.48
USP39-214ENST00000474572 NDUFB1O75438 58 aa5.77□□□□□ -1.49
USP39-214ENST00000474572 C5orf47Q569G3 176 aa5.77□□□□□ -1.49
USP39-214ENST00000474572 HRCT1Q6UXD1 115 aa5.76□□□□□ -1.49
USP39-214ENST00000474572 A0A1B0GVY2 172 aa5.75□□□□□ -1.49
USP39-214ENST00000474572 KRTAP1-4P0C5Y4 121 aa5.75□□□□□ -1.49
USP39-214ENST00000474572 KRTAP13-2Q52LG2 175 aa5.75□□□□□ -1.49
USP39-214ENST00000474572 LRP1BQ9NZR2 4599 aa5.75□□□□□ -1.49
USP39-214ENST00000474572 A0A087X002 238 aa5.74□□□□□ -1.49
USP39-214ENST00000474572 A0A1B0GVX0 72 aa5.74□□□□□ -1.49
USP39-214ENST00000474572 Q5XG85 94 aa5.74□□□□□ -1.49
USP39-214ENST00000474572 C8orf17Q9NRJ1 99 aa5.74□□□□□ -1.49
USP39-214ENST00000474572 hDV103S1A0JD37 113 aa5.72□□□□□ -1.49
USP39-214ENST00000474572 H3BPC8 53 aa5.72□□□□□ -1.49
USP39-214ENST00000474572 OXTP01178 125 aa5.72□□□□□ -1.49
USP39-214ENST00000474572 SERP1Q9Y6X1 66 aa5.71□□□□□ -1.5
USP39-214ENST00000474572 MP68P56378 58 aa5.69□□□□□ -1.5
USP39-214ENST00000474572 H0Y9P7 68 aa5.68□□□□□ -1.5
USP39-214ENST00000474572 CDK2AP2O75956 126 aa5.68□□□□□ -1.5
USP39-214ENST00000474572 SPINK6Q6UWN8 80 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms