RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 H0Y9P7 68 aa11.78□□□□□ -0.52
ECHDC1-214ENST00000474289 INAFM1C9JVW0 142 aa11.77□□□□□ -0.52
ECHDC1-214ENST00000474289 PRR15LQ9BU68 103 aa11.77□□□□□ -0.53
ECHDC1-214ENST00000474289 LINC00588Q9Y4M8 146 aa11.75□□□□□ -0.53
ECHDC1-214ENST00000474289 NSD1Q96L73 2696 aaPredicted RBP11.74□□□□□ -0.53
ECHDC1-214ENST00000474289 REG3GQ6UW15 175 aa11.74□□□□□ -0.53
ECHDC1-214ENST00000474289 BAHCC1Q9P281 2608 aa11.73□□□□□ -0.53
ECHDC1-214ENST00000474289 H3BPC8 53 aa11.73□□□□□ -0.53
ECHDC1-214ENST00000474289 CASC2Q6XLA1 102 aa11.72□□□□□ -0.53
ECHDC1-214ENST00000474289 CASC10Q5T4H9 136 aa11.72□□□□□ -0.53
ECHDC1-214ENST00000474289 TENM3Q9P273 2699 aa11.71□□□□□ -0.53
ECHDC1-214ENST00000474289 KTN1-AS1Q86SY8 53 aa11.71□□□□□ -0.54
ECHDC1-214ENST00000474289 C9orf163Q8N9P6 203 aa11.7□□□□□ -0.54
ECHDC1-214ENST00000474289 SPTSSBQ8NFR3 76 aa11.7□□□□□ -0.54
ECHDC1-214ENST00000474289 ANK2Q01484 3957 aa11.69□□□□□ -0.54
ECHDC1-214ENST00000474289 CNBPP62633 177 aaKnown RBP11.69□□□□□ -0.54
ECHDC1-214ENST00000474289 LCA10Q71F78 164 aa11.69□□□□□ -0.54
ECHDC1-214ENST00000474289 IGLV8-61A0A075B6I0 122 aa11.69□□□□□ -0.54
ECHDC1-214ENST00000474289 DNAH1Q9P2D7 4330 aa11.68□□□□□ -0.54
ECHDC1-214ENST00000474289 DNAH10OSP0CZ25 163 aa11.67□□□□□ -0.54
ECHDC1-214ENST00000474289 Q75L30 129 aa11.67□□□□□ -0.54
ECHDC1-214ENST00000474289 PRLHP81277 87 aa11.67□□□□□ -0.54
ECHDC1-214ENST00000474289 OXLD1Q5BKU9 147 aa11.67□□□□□ -0.54
ECHDC1-214ENST00000474289 HECTD1Q9ULT8 2610 aa11.67□□□□□ -0.54
ECHDC1-214ENST00000474289 COA5Q86WW8 74 aa11.65□□□□□ -0.54
ECHDC1-214ENST00000474289 A6NED7 52 aa11.65□□□□□ -0.55
ECHDC1-214ENST00000474289 ATP11AUNQ6ZP68 121 aa11.65□□□□□ -0.55
ECHDC1-214ENST00000474289 LOC101927531A0A1B0GV80 90 aa11.64□□□□□ -0.55
ECHDC1-214ENST00000474289 KRTAP10-11P60412 298 aa11.64□□□□□ -0.55
ECHDC1-214ENST00000474289 DEFB131BA0A096LNP1 70 aa11.62□□□□□ -0.55
ECHDC1-214ENST00000474289 A8MWP4 228 aa11.62□□□□□ -0.55
ECHDC1-214ENST00000474289 SRRM2Q9UQ35 2752 aaKnown RBP11.62□□□□□ -0.55
ECHDC1-214ENST00000474289 J3QKU1 62 aa11.61□□□□□ -0.55
ECHDC1-214ENST00000474289 RBM12B-AS1Q9P1G2 102 aa11.61□□□□□ -0.55
ECHDC1-214ENST00000474289 LINC00472Q9H8W2 130 aa11.59□□□□□ -0.55
ECHDC1-214ENST00000474289 IGLV7-46A0A075B6I9 117 aa11.59□□□□□ -0.55
ECHDC1-214ENST00000474289 A6NN06 94 aa11.58□□□□□ -0.56
ECHDC1-214ENST00000474289 C11orf45Q8TAV5 145 aa11.55□□□□□ -0.56
ECHDC1-214ENST00000474289 CDC42SE1Q9NRR8 79 aa11.55□□□□□ -0.56
ECHDC1-214ENST00000474289 MMP24-AS1A0A0U1RRL7 71 aa11.53□□□□□ -0.56
ECHDC1-214ENST00000474289 PHF5AQ7RTV0 110 aaKnown RBP11.53□□□□□ -0.56
ECHDC1-214ENST00000474289 NDUFS5O43920 106 aa11.52□□□□□ -0.56
ECHDC1-214ENST00000474289 CSMD3Q7Z407 3707 aa11.52□□□□□ -0.57
ECHDC1-214ENST00000474289 H0Y9J4 135 aa11.52□□□□□ -0.57
ECHDC1-214ENST00000474289 PCOTHQ58A44 107 aa11.52□□□□□ -0.57
ECHDC1-214ENST00000474289 A0A096LNI7 61 aa11.5□□□□□ -0.57
ECHDC1-214ENST00000474289 IGKV2-24A0A0C4DH68 120 aa11.5□□□□□ -0.57
ECHDC1-214ENST00000474289 FLNBO75369 2602 aaKnown RBP11.5□□□□□ -0.57
ECHDC1-214ENST00000474289 SPAG11AQ6PDA7 123 aa11.5□□□□□ -0.57
ECHDC1-214ENST00000474289 DNAH10Q8IVF4 4471 aa11.5□□□□□ -0.57
ECHDC1-214ENST00000474289 TENM2Q9NT68 2774 aa11.49□□□□□ -0.57
ECHDC1-214ENST00000474289 LINC01558Q9Y6Z2 57 aa11.48□□□□□ -0.57
ECHDC1-214ENST00000474289 PLAC8Q9NZF1 115 aa11.48□□□□□ -0.57
ECHDC1-214ENST00000474289 SPRR1BP22528 89 aa11.46□□□□□ -0.58
ECHDC1-214ENST00000474289 MOBPQ13875 183 aa11.45□□□□□ -0.58
ECHDC1-214ENST00000474289 KRTAP11-1Q8IUC1 163 aa11.44□□□□□ -0.58
ECHDC1-214ENST00000474289 FBN1P35555 2871 aaKnown RBP11.42□□□□□ -0.58
ECHDC1-214ENST00000474289 C7orf65Q6ZTY9 151 aa11.42□□□□□ -0.58
ECHDC1-214ENST00000474289 CMYA5Q8N3K9 4069 aa11.41□□□□□ -0.58
ECHDC1-214ENST00000474289 SPINK7P58062 85 aa11.4□□□□□ -0.58
ECHDC1-214ENST00000474289 MAST4O15021 2626 aa11.4□□□□□ -0.58
ECHDC1-214ENST00000474289 KMT2BQ9UMN6 2715 aaPredicted RBP11.4□□□□□ -0.58
ECHDC1-214ENST00000474289 ASB16-AS1Q495Z4 193 aa11.39□□□□□ -0.59
ECHDC1-214ENST00000474289 TP53AIP1Q9HCN2 124 aa11.39□□□□□ -0.59
ECHDC1-214ENST00000474289 Q6ZR54 194 aa11.37□□□□□ -0.59
ECHDC1-214ENST00000474289 LYSTQ99698 3801 aa11.37□□□□□ -0.59
ECHDC1-214ENST00000474289 HRES1P13985 223 aa11.37□□□□□ -0.59
ECHDC1-214ENST00000474289 STAB1Q9NY15 2570 aa11.37□□□□□ -0.59
ECHDC1-214ENST00000474289 NOTCH1P46531 2555 aa11.36□□□□□ -0.59
ECHDC1-214ENST00000474289 Q96NJ1 140 aa11.36□□□□□ -0.59
ECHDC1-214ENST00000474289 CHTF8P0CG12 524 aa11.33□□□□□ -0.6
ECHDC1-214ENST00000474289 C8orf17Q9NRJ1 99 aa11.31□□□□□ -0.6
ECHDC1-214ENST00000474289 DNAH9Q9NYC9 4486 aa11.3□□□□□ -0.6
ECHDC1-214ENST00000474289 DNAH3Q8TD57 4116 aa11.29□□□□□ -0.6
ECHDC1-214ENST00000474289 COL7A1Q02388 2944 aa11.28□□□□□ -0.6
ECHDC1-214ENST00000474289 KRTAP1-5Q9BYS1 174 aa11.26□□□□□ -0.61
ECHDC1-214ENST00000474289 IGHV6-1A0A0B4J1U7 121 aa11.25□□□□□ -0.61
ECHDC1-214ENST00000474289 KRTAP24-1Q3LI83 254 aa11.25□□□□□ -0.61
ECHDC1-214ENST00000474289 NBEAL1Q6ZS30 2694 aa11.24□□□□□ -0.61
ECHDC1-214ENST00000474289 IGLV9-49A0A0B4J1Y8 123 aa11.23□□□□□ -0.61
ECHDC1-214ENST00000474289 HUWE1Q7Z6Z7 4374 aaKnown RBP11.23□□□□□ -0.61
ECHDC1-214ENST00000474289 COL6A5A8TX70 2615 aa11.22□□□□□ -0.61
ECHDC1-214ENST00000474289 A0A1B0GVX0 72 aa11.21□□□□□ -0.61
ECHDC1-214ENST00000474289 PRR26Q8N8Z3 221 aa11.21□□□□□ -0.61
ECHDC1-214ENST00000474289 MRPL34Q9BQ48 92 aaKnown RBP11.2□□□□□ -0.62
ECHDC1-214ENST00000474289 KRTAP13-1Q8IUC0 172 aa11.2□□□□□ -0.62
ECHDC1-214ENST00000474289 LINC00313P59037 77 aa11.17□□□□□ -0.62
ECHDC1-214ENST00000474289 A0A087X002 238 aa11.17□□□□□ -0.62
ECHDC1-214ENST00000474289 NOTCH2NLQ7Z3S9 236 aa11.17□□□□□ -0.62
ECHDC1-214ENST00000474289 K7EIL1 84 aa11.16□□□□□ -0.62
ECHDC1-214ENST00000474289 ALMS1Q8TCU4 4167 aa11.14□□□□□ -0.63
ECHDC1-214ENST00000474289 PRAC1Q96KF2 57 aa11.13□□□□□ -0.63
ECHDC1-214ENST00000474289 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
ECHDC1-214ENST00000474289 MDFIQ99750 246 aa11.13□□□□□ -0.63
ECHDC1-214ENST00000474289 C8orf87E5RJ46 101 aa11.11□□□□□ -0.63
ECHDC1-214ENST00000474289 PANO1I0J062 215 aa11.11□□□□□ -0.63
ECHDC1-214ENST00000474289 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
ECHDC1-214ENST00000474289 Q5W150 140 aa11.09□□□□□ -0.63
ECHDC1-214ENST00000474289 ADM2Q7Z4H4 148 aa11.07□□□□□ -0.64
ECHDC1-214ENST00000474289 KRTAP13-3Q3SY46 172 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms