RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 VAMP3Q15836 100 aa13.09□□□□□ -0.31
PKD1-211ENST00000474088 LINC00575Q6W349 94 aa13.07□□□□□ -0.32
PKD1-211ENST00000474088 SNRPEP62304 92 aaKnown RBP13.03□□□□□ -0.32
PKD1-211ENST00000474088 Q6JHZ5 121 aa13.03□□□□□ -0.32
PKD1-211ENST00000474088 Q6ZQY7 126 aa13.03□□□□□ -0.32
PKD1-211ENST00000474088 hADV29S1A0JD25 119 aa13.02□□□□□ -0.33
PKD1-211ENST00000474088 TRBV7-7A0A0K0K1E9 115 aa13.01□□□□□ -0.33
PKD1-211ENST00000474088 IGFL1Q6UW32 110 aa13□□□□□ -0.33
PKD1-211ENST00000474088 CLEC2BQ92478 149 aa13□□□□□ -0.33
PKD1-211ENST00000474088 OCIAD2Q56VL3 154 aa12.98□□□□□ -0.33
PKD1-211ENST00000474088 ATP11AUNQ6ZP68 121 aa12.94□□□□□ -0.34
PKD1-211ENST00000474088 OBSCN-AS1Q96MR7 158 aa12.94□□□□□ -0.34
PKD1-211ENST00000474088 Q75L30 129 aa12.93□□□□□ -0.34
PKD1-211ENST00000474088 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.92□□□□□ -0.34
PKD1-211ENST00000474088 FLGP20930 4061 aaPredicted RBP12.91□□□□□ -0.34
PKD1-211ENST00000474088 Q6Q795 121 aa12.89□□□□□ -0.35
PKD1-211ENST00000474088 PPDPFLQ8WWR9 84 aa12.88□□□□□ -0.35
PKD1-211ENST00000474088 HSBP1L1C9JCN9 74 aa12.87□□□□□ -0.35
PKD1-211ENST00000474088 SNHG12Q9BXW3 62 aa12.87□□□□□ -0.35
PKD1-211ENST00000474088 LST1O00453 97 aa12.86□□□□□ -0.35
PKD1-211ENST00000474088 BVES-AS1Q5T3Y7 98 aa12.85□□□□□ -0.35
PKD1-211ENST00000474088 HIST3H2BBQ8N257 126 aa12.83□□□□□ -0.36
PKD1-211ENST00000474088 C12orf57Q99622 126 aa12.83□□□□□ -0.36
PKD1-211ENST00000474088 HIST1H2BLQ99880 126 aa12.83□□□□□ -0.36
PKD1-211ENST00000474088 H3BUT2 72 aa12.82□□□□□ -0.36
PKD1-211ENST00000474088 Q96NJ1 140 aa12.82□□□□□ -0.36
PKD1-211ENST00000474088 SCGB1D1O95968 90 aa12.81□□□□□ -0.36
PKD1-211ENST00000474088 S100A2P29034 98 aa12.8□□□□□ -0.36
PKD1-211ENST00000474088 HIST1H4GQ99525 98 aa12.78□□□□□ -0.36
PKD1-211ENST00000474088 SS18L2Q9UHA2 77 aa12.75□□□□□ -0.37
PKD1-211ENST00000474088 C20orf166-AS1Q96NR2 134 aa12.74□□□□□ -0.37
PKD1-211ENST00000474088 TEN1Q86WV5 123 aa12.71□□□□□ -0.37
PKD1-211ENST00000474088 A8MUU9 505 aa12.7□□□□□ -0.38
PKD1-211ENST00000474088 SNCGO76070 127 aa12.68□□□□□ -0.38
PKD1-211ENST00000474088 COX8AP10176 69 aa12.68□□□□□ -0.38
PKD1-211ENST00000474088 NDUFV3P56181 108 aaKnown RBP12.68□□□□□ -0.38
PKD1-211ENST00000474088 CFC1P0CG37 223 aa12.67□□□□□ -0.38
PKD1-211ENST00000474088 H0YGX0 51 aa12.65□□□□□ -0.38
PKD1-211ENST00000474088 KRTAP9-8Q9BYQ0 159 aa12.65□□□□□ -0.38
PKD1-211ENST00000474088 TRBV20-1A0A075B6N2 111 aa12.64□□□□□ -0.39
PKD1-211ENST00000474088 A0A087WSZ3 146 aa12.64□□□□□ -0.39
PKD1-211ENST00000474088 RAB37Q96AX2 223 aa12.64□□□□□ -0.39
PKD1-211ENST00000474088 FAM218AQ96MZ4 157 aa12.64□□□□□ -0.39
PKD1-211ENST00000474088 DLEU1O43261 78 aa12.63□□□□□ -0.39
PKD1-211ENST00000474088 S100A6P06703 90 aa12.62□□□□□ -0.39
PKD1-211ENST00000474088 H3BMG7 143 aa12.59□□□□□ -0.39
PKD1-211ENST00000474088 A0A0B4J2C4 111 aa12.58□□□□□ -0.4
PKD1-211ENST00000474088 DSCR10P59022 87 aa12.58□□□□□ -0.4
PKD1-211ENST00000474088 C14orf144Q96I85 54 aa12.55□□□□□ -0.4
PKD1-211ENST00000474088 GHRHP01286 108 aa12.54□□□□□ -0.4
PKD1-211ENST00000474088 HIGD1BQ9P298 99 aa12.54□□□□□ -0.4
PKD1-211ENST00000474088 A0A1B0GX51 115 aa12.53□□□□□ -0.4
PKD1-211ENST00000474088 FABP2P12104 132 aa12.53□□□□□ -0.4
PKD1-211ENST00000474088 A0A1W2PNM2 257 aa12.52□□□□□ -0.41
PKD1-211ENST00000474088 S100A1P23297 94 aa12.51□□□□□ -0.41
PKD1-211ENST00000474088 KRTAP16-1A8MUX0 517 aa12.5□□□□□ -0.41
PKD1-211ENST00000474088 SIGMAR1Q99720 223 aa12.5□□□□□ -0.41
PKD1-211ENST00000474088 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.48□□□□□ -0.41
PKD1-211ENST00000474088 LINC00313P59037 77 aa12.48□□□□□ -0.41
PKD1-211ENST00000474088 C2orf91Q6ZV80 131 aa12.46□□□□□ -0.41
PKD1-211ENST00000474088 PRO1854Q9UHT4 67 aa12.46□□□□□ -0.41
PKD1-211ENST00000474088 SPATA45Q537H7 98 aa12.45□□□□□ -0.42
PKD1-211ENST00000474088 PAM16Q9Y3D7 125 aa12.45□□□□□ -0.42
PKD1-211ENST00000474088 IGKV4-1P06312 121 aa12.44□□□□□ -0.42
PKD1-211ENST00000474088 CEND1Q8N111 149 aa12.44□□□□□ -0.42
PKD1-211ENST00000474088 USH2AO75445 5202 aa12.43□□□□□ -0.42
PKD1-211ENST00000474088 FAM236DA0A1B0GTK5 79 aa12.43□□□□□ -0.42
PKD1-211ENST00000474088 KRTAP9-7A8MTY7 169 aa12.43□□□□□ -0.42
PKD1-211ENST00000474088 FAM236CP0DP71 79 aa12.43□□□□□ -0.42
PKD1-211ENST00000474088 MT2AP02795 61 aa12.42□□□□□ -0.42
PKD1-211ENST00000474088 ANKRD29Q8N6D5 301 aa12.42□□□□□ -0.42
PKD1-211ENST00000474088 TRBV7-4A0A0J9YYF1 115 aa12.41□□□□□ -0.42
PKD1-211ENST00000474088 SSPOA2VEC9 5147 aa12.39□□□□□ -0.43
PKD1-211ENST00000474088 TMEM238LA0A1B0GVL6 79 aa12.39□□□□□ -0.43
PKD1-211ENST00000474088 A6NJY4 79 aa12.39□□□□□ -0.43
PKD1-211ENST00000474088 TRIAP1O43715 76 aa12.39□□□□□ -0.43
PKD1-211ENST00000474088 NOTCH2NLQ7Z3S9 236 aa12.39□□□□□ -0.43
PKD1-211ENST00000474088 HRES1P13985 223 aa12.37□□□□□ -0.43
PKD1-211ENST00000474088 MPLKIPQ8TAP9 179 aa12.37□□□□□ -0.43
PKD1-211ENST00000474088 RBM12B-AS1Q9P1G2 102 aa12.37□□□□□ -0.43
PKD1-211ENST00000474088 VAMP8Q9BV40 100 aa12.36□□□□□ -0.43
PKD1-211ENST00000474088 FXYD2P54710 66 aa12.35□□□□□ -0.43
PKD1-211ENST00000474088 DEFB116Q30KQ4 102 aa12.35□□□□□ -0.43
PKD1-211ENST00000474088 ORMDL1Q9P0S3 153 aa12.35□□□□□ -0.43
PKD1-211ENST00000474088 A0A1B0GV72 72 aa12.34□□□□□ -0.43
PKD1-211ENST00000474088 LINC00472Q9H8W2 130 aa12.34□□□□□ -0.43
PKD1-211ENST00000474088 DNAL4O96015 105 aa12.33□□□□□ -0.44
PKD1-211ENST00000474088 H3BQ85 93 aa12.32□□□□□ -0.44
PKD1-211ENST00000474088 MT1FP04733 61 aa12.32□□□□□ -0.44
PKD1-211ENST00000474088 IGHV6-1A0A0B4J1U7 121 aa12.29□□□□□ -0.44
PKD1-211ENST00000474088 TMEM256-PLSCR3K7ERE1 68 aa12.29□□□□□ -0.44
PKD1-211ENST00000474088 LCE2BO14633 110 aa12.28□□□□□ -0.44
PKD1-211ENST00000474088 CCKP06307 115 aa12.28□□□□□ -0.44
PKD1-211ENST00000474088 TRACP01848 142 aa12.27□□□□□ -0.45
PKD1-211ENST00000474088 KRTAP10-10P60014 251 aa12.26□□□□□ -0.45
PKD1-211ENST00000474088 KRTAP9-3Q9BYQ3 159 aa12.26□□□□□ -0.45
PKD1-211ENST00000474088 PSMB2P49721 201 aa12.25□□□□□ -0.45
PKD1-211ENST00000474088 KRTAP19-1Q8IUB9 90 aa12.22□□□□□ -0.45
PKD1-211ENST00000474088 COX6CP09669 75 aa12.21□□□□□ -0.45
PKD1-211ENST00000474088 UBE2V1Q13404 147 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms