RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CHTF8P0CG12 524 aa4.39□□□□□ -1.71
CKS1B-205ENST00000473344 NTM-AS1Q6ZSK4 140 aa4.39□□□□□ -1.71
CKS1B-205ENST00000473344 FAM19A3Q7Z5A8 133 aa4.39□□□□□ -1.71
CKS1B-205ENST00000473344 SPACA4Q8TDM5 124 aa4.39□□□□□ -1.71
CKS1B-205ENST00000473344 IGLV5-39A0A0G2JS06 123 aa4.38□□□□□ -1.71
CKS1B-205ENST00000473344 UBE2L6O14933 153 aa4.38□□□□□ -1.71
CKS1B-205ENST00000473344 RBM3P98179 157 aaKnown RBP4.38□□□□□ -1.71
CKS1B-205ENST00000473344 ADAMTSL4-AS1Q5T5F5 129 aa4.38□□□□□ -1.71
CKS1B-205ENST00000473344 KRTAP26-1Q6PEX3 210 aa4.38□□□□□ -1.71
CKS1B-205ENST00000473344 LINC01561Q8N1V8 128 aa4.38□□□□□ -1.71
CKS1B-205ENST00000473344 C20orf197Q8N268 126 aa4.38□□□□□ -1.71
CKS1B-205ENST00000473344 COX6A2Q02221 97 aa4.37□□□□□ -1.71
CKS1B-205ENST00000473344 PLAC8Q9NZF1 115 aa4.37□□□□□ -1.71
CKS1B-205ENST00000473344 IGKV2-24A0A0C4DH68 120 aa4.36□□□□□ -1.71
CKS1B-205ENST00000473344 A0A1B0GUV1 79 aa4.36□□□□□ -1.71
CKS1B-205ENST00000473344 CXCL6P80162 114 aa4.36□□□□□ -1.71
CKS1B-205ENST00000473344 REG3GQ6UW15 175 aa4.36□□□□□ -1.71
CKS1B-205ENST00000473344 LINC00846Q9NV44 126 aa4.36□□□□□ -1.71
CKS1B-205ENST00000473344 PKIGQ9Y2B9 76 aa4.36□□□□□ -1.71
CKS1B-205ENST00000473344 IGLV4-60A0A075B6I1 120 aa4.35□□□□□ -1.71
CKS1B-205ENST00000473344 TRBV7-6A0A0J9YX20 115 aa4.35□□□□□ -1.71
CKS1B-205ENST00000473344 H7BZZ5 65 aa4.35□□□□□ -1.71
CKS1B-205ENST00000473344 PRR3P79522 188 aaKnown RBP4.35□□□□□ -1.71
CKS1B-205ENST00000473344 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
CKS1B-205ENST00000473344 C14orf132Q9NPU4 83 aa4.35□□□□□ -1.71
CKS1B-205ENST00000473344 LPAP08519 4548 aa4.34□□□□□ -1.71
CKS1B-205ENST00000473344 IGKV3OR2-268A0A0C4DH90 116 aa4.34□□□□□ -1.71
CKS1B-205ENST00000473344 PMAIP1Q13794 54 aa4.34□□□□□ -1.71
CKS1B-205ENST00000473344 HIGD2BQ4VC39 106 aa4.34□□□□□ -1.71
CKS1B-205ENST00000473344 SPINK6Q6UWN8 80 aa4.34□□□□□ -1.71
CKS1B-205ENST00000473344 PRR15Q8IV56 129 aa4.34□□□□□ -1.71
CKS1B-205ENST00000473344 LINC00474Q9P2X8 69 aa4.34□□□□□ -1.71
CKS1B-205ENST00000473344 TRAV23DV6A0A075B6W5 121 aa4.33□□□□□ -1.72
CKS1B-205ENST00000473344 CD164Q04900 197 aa4.33□□□□□ -1.72
CKS1B-205ENST00000473344 C15orf56Q8N910 161 aa4.33□□□□□ -1.72
CKS1B-205ENST00000473344 LINC00167Q96N53 147 aa4.33□□□□□ -1.72
CKS1B-205ENST00000473344 OPRPNQ99935 248 aaPredicted RBP4.33□□□□□ -1.72
CKS1B-205ENST00000473344 SND1-IT1Q9HBX3 110 aa4.33□□□□□ -1.72
CKS1B-205ENST00000473344 LOC110117498A0A087WWA1 95 aa4.32□□□□□ -1.72
CKS1B-205ENST00000473344 Q6ZRP5 223 aa4.32□□□□□ -1.72
CKS1B-205ENST00000473344 ZNF625Q96I27 306 aaPredicted RBP4.32□□□□□ -1.72
CKS1B-205ENST00000473344 CDKN2A-AS1Q9UH64 79 aa4.32□□□□□ -1.72
CKS1B-205ENST00000473344 A0A087WVE0 104 aa4.31□□□□□ -1.72
CKS1B-205ENST00000473344 A0A096LNI7 61 aa4.31□□□□□ -1.72
CKS1B-205ENST00000473344 GVQW2A0A096LPI5 108 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-205ENST00000473344 F8WEM9 126 aa4.31□□□□□ -1.72
CKS1B-205ENST00000473344 KRTAP10-8P60410 259 aa4.31□□□□□ -1.72
CKS1B-205ENST00000473344 CHCHD10Q8WYQ3 142 aaPredicted RBP4.31□□□□□ -1.72
CKS1B-205ENST00000473344 C22orf24Q9Y442 160 aa4.31□□□□□ -1.72
CKS1B-205ENST00000473344 MUC2Q02817 5179 aa4.31□□□□□ -1.72
CKS1B-205ENST00000473344 A0A0U1RQV1 116 aa4.3□□□□□ -1.72
CKS1B-205ENST00000473344 SMIM1B2RUZ4 78 aa4.3□□□□□ -1.72
CKS1B-205ENST00000473344 MIR7-3HGQ8N6C7 128 aa4.3□□□□□ -1.72
CKS1B-205ENST00000473344 SMIM11BQ8TCY0 68 aa4.3□□□□□ -1.72
CKS1B-205ENST00000473344 CYSTM1Q9H1C7 97 aa4.3□□□□□ -1.72
CKS1B-205ENST00000473344 ZNF561-AS1K7EIQ3 104 aa4.29□□□□□ -1.72
CKS1B-205ENST00000473344 LINC00158P58513 81 aa4.29□□□□□ -1.72
CKS1B-205ENST00000473344 COX7B2Q8TF08 81 aa4.29□□□□□ -1.72
CKS1B-205ENST00000473344 FAM218AQ96MZ4 157 aa4.29□□□□□ -1.72
CKS1B-205ENST00000473344 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-205ENST00000473344 IGKV2-29A2NJV5 120 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-205ENST00000473344 NCR3O14931 201 aa4.28□□□□□ -1.72
CKS1B-205ENST00000473344 LINC00242Q5T6M2 205 aa4.28□□□□□ -1.72
CKS1B-205ENST00000473344 FP248Q71RG6 208 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-205ENST00000473344 MRPL55Q7Z7F7 128 aaKnown RBP4.28□□□□□ -1.72
CKS1B-205ENST00000473344 A0A087WZ39 114 aa4.27□□□□□ -1.73
CKS1B-205ENST00000473344 A0A1B0GW54 56 aa4.27□□□□□ -1.73
CKS1B-205ENST00000473344 SYCNQ0VAF6 134 aa4.27□□□□□ -1.73
CKS1B-205ENST00000473344 SS18Q15532 418 aa4.27□□□□□ -1.73
CKS1B-205ENST00000473344 SOSTDC1Q6X4U4 206 aa4.27□□□□□ -1.73
CKS1B-205ENST00000473344 LINC00959A0A1B0GUT2 108 aa4.26□□□□□ -1.73
CKS1B-205ENST00000473344 PRYO14603 147 aa4.26□□□□□ -1.73
CKS1B-205ENST00000473344 LINC01547P58512 204 aaPredicted RBP4.26□□□□□ -1.73
CKS1B-205ENST00000473344 COX17Q14061 63 aa4.26□□□□□ -1.73
CKS1B-205ENST00000473344 NREPQ16612 68 aa4.26□□□□□ -1.73
CKS1B-205ENST00000473344 Q1T7F1 81 aa4.26□□□□□ -1.73
CKS1B-205ENST00000473344 FAM19A1Q7Z5A9 133 aa4.26□□□□□ -1.73
CKS1B-205ENST00000473344 LINC00337Q8N6G1 96 aa4.26□□□□□ -1.73
CKS1B-205ENST00000473344 TMEM254Q8TBM7 123 aa4.26□□□□□ -1.73
CKS1B-205ENST00000473344 TRBV7-4A0A0J9YYF1 115 aa4.25□□□□□ -1.73
CKS1B-205ENST00000473344 NDUFS5O43920 106 aa4.25□□□□□ -1.73
CKS1B-205ENST00000473344 UBE2BP63146 152 aa4.25□□□□□ -1.73
CKS1B-205ENST00000473344 C1orf137Q5JT78 98 aa4.25□□□□□ -1.73
CKS1B-205ENST00000473344 CD164L2Q6UWJ8 174 aa4.25□□□□□ -1.73
CKS1B-205ENST00000473344 Q6ZQT0 140 aa4.25□□□□□ -1.73
CKS1B-205ENST00000473344 FAM104AQ969W3 186 aa4.25□□□□□ -1.73
CKS1B-205ENST00000473344 PSORS1C2Q9UIG4 136 aa4.25□□□□□ -1.73
CKS1B-205ENST00000473344 IGKV2-28A0A075B6P5 120 aa4.24□□□□□ -1.73
CKS1B-205ENST00000473344 A0A0U1RRA0 63 aa4.24□□□□□ -1.73
CKS1B-205ENST00000473344 NDUFB1O75438 58 aa4.24□□□□□ -1.73
CKS1B-205ENST00000473344 IGKV2D-28P01615 120 aa4.24□□□□□ -1.73
CKS1B-205ENST00000473344 CAMK2N2Q96S95 79 aa4.24□□□□□ -1.73
CKS1B-205ENST00000473344 CDC42SE2Q9NRR3 84 aa4.24□□□□□ -1.73
CKS1B-205ENST00000473344 A0A1W2PNN7 141 aa4.23□□□□□ -1.73
CKS1B-205ENST00000473344 C9orf116Q5BN46 136 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-205ENST00000473344 RNASE13Q5GAN3 156 aaKnown RBP4.23□□□□□ -1.73
CKS1B-205ENST00000473344 Q6ZVQ6 151 aa4.23□□□□□ -1.73
CKS1B-205ENST00000473344 DIRC1Q969H9 104 aa4.23□□□□□ -1.73
CKS1B-205ENST00000473344 SNURFQ9Y675 71 aa4.23□□□□□ -1.73
CKS1B-205ENST00000473344 BPY2O14599 106 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms