RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 IGKV2-28A0A075B6P5 120 aa4.05□□□□□ -1.76
HDAC1-205ENST00000472928 NDUFC2O95298 119 aa4.05□□□□□ -1.76
HDAC1-205ENST00000472928 IGKV2D-28P01615 120 aa4.05□□□□□ -1.76
HDAC1-205ENST00000472928 C9orf129Q5T035 196 aaKnown RBP4.05□□□□□ -1.76
HDAC1-205ENST00000472928 Q5XG85 94 aa4.05□□□□□ -1.76
HDAC1-205ENST00000472928 SCXQ7RTU7 201 aa4.05□□□□□ -1.76
HDAC1-205ENST00000472928 LINC00337Q8N6G1 96 aa4.05□□□□□ -1.76
HDAC1-205ENST00000472928 SERP2Q8N6R1 65 aa4.05□□□□□ -1.76
HDAC1-205ENST00000472928 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
HDAC1-205ENST00000472928 PKIGQ9Y2B9 76 aa4.05□□□□□ -1.76
HDAC1-205ENST00000472928 A0A096LNI7 61 aa4.04□□□□□ -1.76
HDAC1-205ENST00000472928 TRAV13-2A0A0B4J235 113 aa4.04□□□□□ -1.76
HDAC1-205ENST00000472928 IGKV2-24A0A0C4DH68 120 aa4.04□□□□□ -1.76
HDAC1-205ENST00000472928 hADV29S1A0JD25 119 aa4.04□□□□□ -1.76
HDAC1-205ENST00000472928 VPREB1P12018 145 aa4.04□□□□□ -1.76
HDAC1-205ENST00000472928 SEC61BP60468 96 aaKnown RBP4.04□□□□□ -1.76
HDAC1-205ENST00000472928 PRR3P79522 188 aaKnown RBP4.04□□□□□ -1.76
HDAC1-205ENST00000472928 CHTF8P0CG12 524 aa4.03□□□□□ -1.76
HDAC1-205ENST00000472928 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
HDAC1-205ENST00000472928 C9orf163Q8N9P6 203 aa4.03□□□□□ -1.76
HDAC1-205ENST00000472928 NKAPP1Q8N9T2 125 aa4.03□□□□□ -1.76
HDAC1-205ENST00000472928 SMCR5Q8TEV8 140 aa4.03□□□□□ -1.76
HDAC1-205ENST00000472928 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
HDAC1-205ENST00000472928 FAM168BA1KXE4 195 aa4.02□□□□□ -1.77
HDAC1-205ENST00000472928 C4orf26Q17RF5 130 aa4.02□□□□□ -1.77
HDAC1-205ENST00000472928 S100A7L2Q5SY68 101 aa4.02□□□□□ -1.77
HDAC1-205ENST00000472928 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
HDAC1-205ENST00000472928 Q6JHZ5 121 aa4.02□□□□□ -1.77
HDAC1-205ENST00000472928 HRCT1Q6UXD1 115 aa4.02□□□□□ -1.77
HDAC1-205ENST00000472928 PRR26Q8N8Z3 221 aa4.02□□□□□ -1.77
HDAC1-205ENST00000472928 IGLV5-37A0A075B6J1 123 aa4.01□□□□□ -1.77
HDAC1-205ENST00000472928 TRBV10-3A0A0K0K1G6 114 aa4.01□□□□□ -1.77
HDAC1-205ENST00000472928 M0R378 163 aa4.01□□□□□ -1.77
HDAC1-205ENST00000472928 CIRBP-AS1Q8TBR5 109 aa4.01□□□□□ -1.77
HDAC1-205ENST00000472928 SMIM11BQ8TCY0 68 aa4.01□□□□□ -1.77
HDAC1-205ENST00000472928 BCE1O60756 84 aa4□□□□□ -1.77
HDAC1-205ENST00000472928 IGLV6-57P01721 117 aa4□□□□□ -1.77
HDAC1-205ENST00000472928 C7orf33Q8WU49 177 aa4□□□□□ -1.77
HDAC1-205ENST00000472928 CLEC2BQ92478 149 aa4□□□□□ -1.77
HDAC1-205ENST00000472928 LINC00474Q9P2X8 69 aa4□□□□□ -1.77
HDAC1-205ENST00000472928 FAT4Q6V0I7 4981 aa3.99□□□□□ -1.77
HDAC1-205ENST00000472928 TRAV23DV6A0A075B6W5 121 aa3.99□□□□□ -1.77
HDAC1-205ENST00000472928 PANO1I0J062 215 aa3.99□□□□□ -1.77
HDAC1-205ENST00000472928 BAALC-AS2P0C853 105 aa3.99□□□□□ -1.77
HDAC1-205ENST00000472928 RPL28P46779 137 aaKnown RBP3.99□□□□□ -1.77
HDAC1-205ENST00000472928 Q75L30 129 aa3.99□□□□□ -1.77
HDAC1-205ENST00000472928 MRPL55Q7Z7F7 128 aaKnown RBP3.99□□□□□ -1.77
HDAC1-205ENST00000472928 KRTAP7-1Q8IUC3 87 aa3.99□□□□□ -1.77
HDAC1-205ENST00000472928 SPACA4Q8TDM5 124 aa3.99□□□□□ -1.77
HDAC1-205ENST00000472928 SERP1Q9Y6X1 66 aa3.99□□□□□ -1.77
HDAC1-205ENST00000472928 A0A1W2PNN7 141 aa3.98□□□□□ -1.77
HDAC1-205ENST00000472928 RPL37AP61513 92 aaKnown RBP3.98□□□□□ -1.77
HDAC1-205ENST00000472928 DIRC1Q969H9 104 aa3.98□□□□□ -1.77
HDAC1-205ENST00000472928 DSCR8Q96T75 97 aa3.98□□□□□ -1.77
HDAC1-205ENST00000472928 C22orf24Q9Y442 160 aa3.98□□□□□ -1.77
HDAC1-205ENST00000472928 LPAP08519 4548 aa3.97□□□□□ -1.77
HDAC1-205ENST00000472928 RPL37AP8A6NKH3 93 aa3.97□□□□□ -1.77
HDAC1-205ENST00000472928 ZNF73O43830 326 aaPredicted RBP3.97□□□□□ -1.77
HDAC1-205ENST00000472928 C6orf99Q4VX62 202 aa3.97□□□□□ -1.77
HDAC1-205ENST00000472928 OBSCN-AS1Q96MR7 158 aa3.97□□□□□ -1.77
HDAC1-205ENST00000472928 LINC00167Q96N53 147 aa3.97□□□□□ -1.77
HDAC1-205ENST00000472928 CYSTM1Q9H1C7 97 aa3.97□□□□□ -1.77
HDAC1-205ENST00000472928 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
HDAC1-205ENST00000472928 FAM236DA0A1B0GTK5 79 aa3.96□□□□□ -1.78
HDAC1-205ENST00000472928 FAM236CP0DP71 79 aa3.96□□□□□ -1.78
HDAC1-205ENST00000472928 SEC61GP60059 68 aa3.96□□□□□ -1.78
HDAC1-205ENST00000472928 UBE2BP63146 152 aa3.96□□□□□ -1.78
HDAC1-205ENST00000472928 ATP5EP2Q5VTU8 51 aa3.96□□□□□ -1.78
HDAC1-205ENST00000472928 PHF5AQ7RTV0 110 aaKnown RBP3.96□□□□□ -1.78
HDAC1-205ENST00000472928 FAM218AQ96MZ4 157 aa3.96□□□□□ -1.78
HDAC1-205ENST00000472928 IGLV1-50A0A075B6I6 118 aa3.95□□□□□ -1.78
HDAC1-205ENST00000472928 A0A087WYN8 130 aa3.95□□□□□ -1.78
HDAC1-205ENST00000472928 COX7BP24311 80 aa3.95□□□□□ -1.78
HDAC1-205ENST00000472928 KCNQ1DNQ9H478 68 aa3.95□□□□□ -1.78
HDAC1-205ENST00000472928 V9GYY9 64 aa3.95□□□□□ -1.78
HDAC1-205ENST00000472928 MUC2Q02817 5179 aa3.95□□□□□ -1.78
HDAC1-205ENST00000472928 ETDCA0A1B0GVM5 59 aa3.94□□□□□ -1.78
HDAC1-205ENST00000472928 H0YGX0 51 aa3.94□□□□□ -1.78
HDAC1-205ENST00000472928 DNAL4O96015 105 aa3.94□□□□□ -1.78
HDAC1-205ENST00000472928 ELOF1P60002 83 aaKnown RBP3.94□□□□□ -1.78
HDAC1-205ENST00000472928 REG3GQ6UW15 175 aa3.94□□□□□ -1.78
HDAC1-205ENST00000472928 PLAC8Q9NZF1 115 aa3.94□□□□□ -1.78
HDAC1-205ENST00000472928 TRBV7-6A0A0J9YX20 115 aa3.93□□□□□ -1.78
HDAC1-205ENST00000472928 ATP5EP56381 51 aaPredicted RBP3.93□□□□□ -1.78
HDAC1-205ENST00000472928 IGKV3D-7A0A0C4DH55 119 aa3.92□□□□□ -1.78
HDAC1-205ENST00000472928 SPRR1AP35321 89 aa3.92□□□□□ -1.78
HDAC1-205ENST00000472928 C1orf195Q5TG92 126 aa3.92□□□□□ -1.78
HDAC1-205ENST00000472928 LINC00575Q6W349 94 aa3.92□□□□□ -1.78
HDAC1-205ENST00000472928 Q6ZRX8 168 aa3.92□□□□□ -1.78
HDAC1-205ENST00000472928 KRTAP11-1Q8IUC1 163 aa3.92□□□□□ -1.78
HDAC1-205ENST00000472928 TRAV7A0A075B6U4 112 aa3.91□□□□□ -1.78
HDAC1-205ENST00000472928 KRTAP4-16G5E9R7 235 aaPredicted RBP3.91□□□□□ -1.78
HDAC1-205ENST00000472928 NDUFC1O43677 76 aa3.91□□□□□ -1.78
HDAC1-205ENST00000472928 PRLHP81277 87 aa3.91□□□□□ -1.78
HDAC1-205ENST00000472928 FAM19A1Q7Z5A9 133 aa3.91□□□□□ -1.78
HDAC1-205ENST00000472928 LINC00846Q9NV44 126 aa3.91□□□□□ -1.78
HDAC1-205ENST00000472928 H7BZZ5 65 aa3.9□□□□□ -1.79
HDAC1-205ENST00000472928 CCKP06307 115 aa3.9□□□□□ -1.79
HDAC1-205ENST00000472928 UBE2AP49459 152 aa3.9□□□□□ -1.79
HDAC1-205ENST00000472928 KLKP1Q107X0 134 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms