RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 TRAV7A0A075B6U4 112 aa4.82□□□□□ -1.64
CCDC171-205ENST00000472806 A0A1W2PNN7 141 aa4.82□□□□□ -1.64
CCDC171-205ENST00000472806 ST20-AS1Q8NBB2 130 aa4.81□□□□□ -1.64
CCDC171-205ENST00000472806 SPRR4Q96PI1 79 aa4.81□□□□□ -1.64
CCDC171-205ENST00000472806 TENM3Q9P273 2699 aa4.8□□□□□ -1.64
CCDC171-205ENST00000472806 C3orf84H3BNL1 204 aa4.8□□□□□ -1.64
CCDC171-205ENST00000472806 ERC2-IT1O76042 136 aa4.8□□□□□ -1.64
CCDC171-205ENST00000472806 UBE2AP49459 152 aa4.8□□□□□ -1.64
CCDC171-205ENST00000472806 TMEM258P61165 79 aa4.8□□□□□ -1.64
CCDC171-205ENST00000472806 Q6ZRN7 208 aaPredicted RBP4.8□□□□□ -1.64
CCDC171-205ENST00000472806 HIGD2AQ9BW72 106 aa4.8□□□□□ -1.64
CCDC171-205ENST00000472806 IGLV8-61A0A075B6I0 122 aa4.79□□□□□ -1.64
CCDC171-205ENST00000472806 A0A1W2PNM2 257 aa4.79□□□□□ -1.64
CCDC171-205ENST00000472806 SPRR1BP22528 89 aa4.79□□□□□ -1.64
CCDC171-205ENST00000472806 PHF5AQ7RTV0 110 aaKnown RBP4.79□□□□□ -1.64
CCDC171-205ENST00000472806 LINC00476Q8WZB0 136 aa4.79□□□□□ -1.64
CCDC171-205ENST00000472806 DPH3Q96FX2 82 aa4.79□□□□□ -1.64
CCDC171-205ENST00000472806 PRLHP81277 87 aa4.78□□□□□ -1.64
CCDC171-205ENST00000472806 SMIM29Q86T20 159 aa4.78□□□□□ -1.64
CCDC171-205ENST00000472806 COL6A5A8TX70 2615 aa4.78□□□□□ -1.64
CCDC171-205ENST00000472806 A0A087WTM6 91 aa4.77□□□□□ -1.65
CCDC171-205ENST00000472806 EPM2AB3EWF7 344 aa4.77□□□□□ -1.65
CCDC171-205ENST00000472806 CHTF8P0CG12 524 aa4.77□□□□□ -1.65
CCDC171-205ENST00000472806 SCXQ7RTU7 201 aa4.77□□□□□ -1.65
CCDC171-205ENST00000472806 ANK2Q01484 3957 aa4.77□□□□□ -1.65
CCDC171-205ENST00000472806 NDUFC1O43677 76 aa4.76□□□□□ -1.65
CCDC171-205ENST00000472806 IGKV4-1P06312 121 aa4.76□□□□□ -1.65
CCDC171-205ENST00000472806 SPACA4Q8TDM5 124 aa4.76□□□□□ -1.65
CCDC171-205ENST00000472806 ZNF706Q9Y5V0 76 aaPredicted RBP4.76□□□□□ -1.65
CCDC171-205ENST00000472806 DNAH1Q9P2D7 4330 aa4.75□□□□□ -1.65
CCDC171-205ENST00000472806 IGFL1Q6UW32 110 aa4.75□□□□□ -1.65
CCDC171-205ENST00000472806 NOTCH1P46531 2555 aa4.74□□□□□ -1.65
CCDC171-205ENST00000472806 RTL8CO15255 209 aa4.74□□□□□ -1.65
CCDC171-205ENST00000472806 RPL37AP61513 92 aaKnown RBP4.74□□□□□ -1.65
CCDC171-205ENST00000472806 C1orf134Q5TEV5 83 aa4.74□□□□□ -1.65
CCDC171-205ENST00000472806 Q6ZR54 194 aa4.74□□□□□ -1.65
CCDC171-205ENST00000472806 C20orf197Q8N268 126 aa4.74□□□□□ -1.65
CCDC171-205ENST00000472806 J3KT08 172 aa4.73□□□□□ -1.65
CCDC171-205ENST00000472806 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
CCDC171-205ENST00000472806 KLKP1Q107X0 134 aa4.73□□□□□ -1.65
CCDC171-205ENST00000472806 PKD1L1Q8TDX9 2849 aa4.73□□□□□ -1.65
CCDC171-205ENST00000472806 DNAH9Q9NYC9 4486 aa4.72□□□□□ -1.65
CCDC171-205ENST00000472806 IGLV5-52A0A0A0MRZ9 124 aa4.72□□□□□ -1.65
CCDC171-205ENST00000472806 ATP5EP56381 51 aaPredicted RBP4.71□□□□□ -1.66
CCDC171-205ENST00000472806 KRTAP13-1Q8IUC0 172 aa4.71□□□□□ -1.66
CCDC171-205ENST00000472806 Q8N9L7 120 aa4.71□□□□□ -1.66
CCDC171-205ENST00000472806 PLAC8Q9NZF1 115 aa4.71□□□□□ -1.66
CCDC171-205ENST00000472806 MGAM2Q2M2H8 2515 aa4.71□□□□□ -1.66
CCDC171-205ENST00000472806 DYNC2H1Q8NCM8 4307 aaKnown RBP4.7□□□□□ -1.66
CCDC171-205ENST00000472806 A0A087WSZ3 146 aa4.7□□□□□ -1.66
CCDC171-205ENST00000472806 KRTAP21-3Q3LHN1 58 aa4.7□□□□□ -1.66
CCDC171-205ENST00000472806 KRTAP11-1Q8IUC1 163 aa4.7□□□□□ -1.66
CCDC171-205ENST00000472806 FAM236DA0A1B0GTK5 79 aa4.69□□□□□ -1.66
CCDC171-205ENST00000472806 HCG22E2RYF7 251 aa4.69□□□□□ -1.66
CCDC171-205ENST00000472806 FAM236CP0DP71 79 aa4.69□□□□□ -1.66
CCDC171-205ENST00000472806 DSCR10P59022 87 aa4.69□□□□□ -1.66
CCDC171-205ENST00000472806 TMEM254Q8TBM7 123 aa4.69□□□□□ -1.66
CCDC171-205ENST00000472806 OCR1Q9BZK8 76 aa4.69□□□□□ -1.66
CCDC171-205ENST00000472806 NBEAL1Q6ZS30 2694 aa4.68□□□□□ -1.66
CCDC171-205ENST00000472806 PANO1I0J062 215 aa4.68□□□□□ -1.66
CCDC171-205ENST00000472806 LY6G6CO95867 125 aa4.68□□□□□ -1.66
CCDC171-205ENST00000472806 LINC00483Q53H64 154 aa4.68□□□□□ -1.66
CCDC171-205ENST00000472806 K7EQZ3 153 aa4.67□□□□□ -1.66
CCDC171-205ENST00000472806 ZNF861PO60384 105 aa4.67□□□□□ -1.66
CCDC171-205ENST00000472806 H7BZZ5 65 aa4.66□□□□□ -1.66
CCDC171-205ENST00000472806 NDUFB1O75438 58 aa4.66□□□□□ -1.66
CCDC171-205ENST00000472806 C5orf47Q569G3 176 aa4.66□□□□□ -1.66
CCDC171-205ENST00000472806 CYSTM1Q9H1C7 97 aa4.66□□□□□ -1.66
CCDC171-205ENST00000472806 PSORS1C2Q9UIG4 136 aa4.66□□□□□ -1.66
CCDC171-205ENST00000472806 A0A0U1RQV1 116 aa4.65□□□□□ -1.67
CCDC171-205ENST00000472806 A8MWP4 228 aa4.65□□□□□ -1.67
CCDC171-205ENST00000472806 SNURFQ9Y675 71 aa4.65□□□□□ -1.67
CCDC171-205ENST00000472806 IGLV9-49A0A0B4J1Y8 123 aa4.64□□□□□ -1.67
CCDC171-205ENST00000472806 LCE6AA0A183 80 aa4.64□□□□□ -1.67
CCDC171-205ENST00000472806 PRR15Q8IV56 129 aa4.64□□□□□ -1.67
CCDC171-205ENST00000472806 LINC00472Q9H8W2 130 aa4.64□□□□□ -1.67
CCDC171-205ENST00000472806 FAM30AQ9NZY2 134 aa4.64□□□□□ -1.67
CCDC171-205ENST00000472806 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
CCDC171-205ENST00000472806 STAB2Q8WWQ8 2551 aa4.63□□□□□ -1.67
CCDC171-205ENST00000472806 MP68P56378 58 aa4.63□□□□□ -1.67
CCDC171-205ENST00000472806 A0A0G2JQZ4 141 aa4.62□□□□□ -1.67
CCDC171-205ENST00000472806 H3BPC8 53 aa4.62□□□□□ -1.67
CCDC171-205ENST00000472806 CDK2AP2O75956 126 aa4.62□□□□□ -1.67
CCDC171-205ENST00000472806 IGLV7-43P04211 117 aa4.62□□□□□ -1.67
CCDC171-205ENST00000472806 CASC2Q6XLA1 102 aa4.62□□□□□ -1.67
CCDC171-205ENST00000472806 MOBPQ13875 183 aa4.6□□□□□ -1.67
CCDC171-205ENST00000472806 DEFB116Q30KQ4 102 aa4.6□□□□□ -1.67
CCDC171-205ENST00000472806 WFDC13Q8IUB5 93 aa4.6□□□□□ -1.67
CCDC171-205ENST00000472806 KRTAP29-1A8MX34 341 aaPredicted RBP4.59□□□□□ -1.67
CCDC171-205ENST00000472806 CD164Q04900 197 aa4.59□□□□□ -1.67
CCDC171-205ENST00000472806 PLECQ15149 4684 aaKnown RBP4.59□□□□□ -1.67
CCDC171-205ENST00000472806 SSBP3-AS1Q7Z2R9 100 aa4.59□□□□□ -1.67
CCDC171-205ENST00000472806 VPS13DQ5THJ4 4388 aa4.58□□□□□ -1.68
CCDC171-205ENST00000472806 TP53AIP1Q9HCN2 124 aa4.58□□□□□ -1.68
CCDC171-205ENST00000472806 hDV103S1A0JD37 113 aa4.57□□□□□ -1.68
CCDC171-205ENST00000472806 ZCCHC13Q8WW36 166 aaKnown RBP4.57□□□□□ -1.68
CCDC171-205ENST00000472806 DNAH10Q8IVF4 4471 aa4.56□□□□□ -1.68
CCDC171-205ENST00000472806 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
CCDC171-205ENST00000472806 MMP24-AS1A0A0U1RRL7 71 aa4.56□□□□□ -1.68
CCDC171-205ENST00000472806 Q6ZSA8 131 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms