RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 ZNF706Q9Y5V0 76 aaPredicted RBP6.44□□□□□ -1.38
SMARCD3-208ENST00000472789 LINC01600Q96MT4 127 aa6.42□□□□□ -1.38
SMARCD3-208ENST00000472789 TEX49A0A1B0GTD5 131 aa6.41□□□□□ -1.38
SMARCD3-208ENST00000472789 OXTP01178 125 aa6.41□□□□□ -1.38
SMARCD3-208ENST00000472789 KRTAP13-1Q8IUC0 172 aa6.41□□□□□ -1.38
SMARCD3-208ENST00000472789 DEFB105AQ8NG35 78 aa6.41□□□□□ -1.38
SMARCD3-208ENST00000472789 LAMTOR3Q9UHA4 124 aa6.41□□□□□ -1.38
SMARCD3-208ENST00000472789 PRO0461Q9UI25 63 aa6.41□□□□□ -1.38
SMARCD3-208ENST00000472789 KRTAP29-1A8MX34 341 aaPredicted RBP6.4□□□□□ -1.38
SMARCD3-208ENST00000472789 JMJD7-PLA2G4BH0Y9G9 81 aa6.4□□□□□ -1.38
SMARCD3-208ENST00000472789 MTURNQ8N3F0 131 aa6.4□□□□□ -1.38
SMARCD3-208ENST00000472789 RNF213Q63HN8 5207 aa6.4□□□□□ -1.39
SMARCD3-208ENST00000472789 IGLV5-48A0A075B6I7 105 aa6.39□□□□□ -1.39
SMARCD3-208ENST00000472789 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
SMARCD3-208ENST00000472789 F8WEM9 126 aa6.38□□□□□ -1.39
SMARCD3-208ENST00000472789 ERC2-IT1O76042 136 aa6.38□□□□□ -1.39
SMARCD3-208ENST00000472789 C21orf62-AS1Q17RA5 79 aa6.38□□□□□ -1.39
SMARCD3-208ENST00000472789 TEN1Q86WV5 123 aa6.38□□□□□ -1.39
SMARCD3-208ENST00000472789 LRP2P98164 4655 aa6.38□□□□□ -1.39
SMARCD3-208ENST00000472789 SMCPP49901 116 aaPredicted RBP6.37□□□□□ -1.39
SMARCD3-208ENST00000472789 NDUFV3P56181 108 aaKnown RBP6.37□□□□□ -1.39
SMARCD3-208ENST00000472789 ETDBQ3ZM63 59 aa6.37□□□□□ -1.39
SMARCD3-208ENST00000472789 GAGE2AQ6NT46 116 aa6.37□□□□□ -1.39
SMARCD3-208ENST00000472789 ST20-AS1Q8NBB2 130 aa6.37□□□□□ -1.39
SMARCD3-208ENST00000472789 RBM3P98179 157 aaKnown RBP6.36□□□□□ -1.39
SMARCD3-208ENST00000472789 Q8N377 158 aa6.36□□□□□ -1.39
SMARCD3-208ENST00000472789 J3QR89 54 aa6.35□□□□□ -1.39
SMARCD3-208ENST00000472789 PDE6GP18545 87 aa6.35□□□□□ -1.39
SMARCD3-208ENST00000472789 SPRR1BP22528 89 aa6.35□□□□□ -1.39
SMARCD3-208ENST00000472789 SPRR4Q96PI1 79 aa6.35□□□□□ -1.39
SMARCD3-208ENST00000472789 DSCR8Q96T75 97 aa6.35□□□□□ -1.39
SMARCD3-208ENST00000472789 LINC01547P58512 204 aaPredicted RBP6.34□□□□□ -1.39
SMARCD3-208ENST00000472789 LINC00483Q53H64 154 aa6.32□□□□□ -1.4
SMARCD3-208ENST00000472789 PRR26Q8N8Z3 221 aa6.32□□□□□ -1.4
SMARCD3-208ENST00000472789 OBSCN-AS1Q96MR7 158 aa6.31□□□□□ -1.4
SMARCD3-208ENST00000472789 KRTAP1-4P0C5Y4 121 aa6.3□□□□□ -1.4
SMARCD3-208ENST00000472789 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
SMARCD3-208ENST00000472789 FAM229BQ4G0N7 80 aa6.3□□□□□ -1.4
SMARCD3-208ENST00000472789 Q6JHZ5 121 aa6.3□□□□□ -1.4
SMARCD3-208ENST00000472789 ANAPC11Q9NYG5 84 aa6.3□□□□□ -1.4
SMARCD3-208ENST00000472789 K7ERU9 68 aa6.29□□□□□ -1.4
SMARCD3-208ENST00000472789 SMIM29Q86T20 159 aa6.29□□□□□ -1.4
SMARCD3-208ENST00000472789 TNXBP22105 4242 aa6.28□□□□□ -1.4
SMARCD3-208ENST00000472789 LOC110117498A0A087WWA1 95 aa6.28□□□□□ -1.4
SMARCD3-208ENST00000472789 C3orf22Q8N5N4 141 aa6.28□□□□□ -1.4
SMARCD3-208ENST00000472789 C14orf132Q9NPU4 83 aa6.28□□□□□ -1.4
SMARCD3-208ENST00000472789 IGLV8-61A0A075B6I0 122 aa6.27□□□□□ -1.41
SMARCD3-208ENST00000472789 A0A1B0GV72 72 aa6.27□□□□□ -1.41
SMARCD3-208ENST00000472789 CRYGAP11844 174 aa6.27□□□□□ -1.41
SMARCD3-208ENST00000472789 KRTAP10-8P60410 259 aa6.27□□□□□ -1.41
SMARCD3-208ENST00000472789 C9orf153Q5TBE3 101 aa6.27□□□□□ -1.41
SMARCD3-208ENST00000472789 IGLV9-49A0A0B4J1Y8 123 aa6.26□□□□□ -1.41
SMARCD3-208ENST00000472789 TRBV7-4A0A0J9YYF1 115 aa6.26□□□□□ -1.41
SMARCD3-208ENST00000472789 A0A1B0GW54 56 aa6.26□□□□□ -1.41
SMARCD3-208ENST00000472789 ACYP1P07311 99 aa6.26□□□□□ -1.41
SMARCD3-208ENST00000472789 A0A087X002 238 aa6.25□□□□□ -1.41
SMARCD3-208ENST00000472789 CCKP06307 115 aa6.25□□□□□ -1.41
SMARCD3-208ENST00000472789 SSBP3-AS1Q7Z2R9 100 aa6.25□□□□□ -1.41
SMARCD3-208ENST00000472789 Q8NBF4 154 aa6.25□□□□□ -1.41
SMARCD3-208ENST00000472789 SVIPQ8NHG7 77 aa6.25□□□□□ -1.41
SMARCD3-208ENST00000472789 Q6ZQT0 140 aa6.24□□□□□ -1.41
SMARCD3-208ENST00000472789 TYMSOSQ8TAI1 123 aa6.24□□□□□ -1.41
SMARCD3-208ENST00000472789 VPS25Q9BRG1 176 aa6.24□□□□□ -1.41
SMARCD3-208ENST00000472789 FAM240AA0A1B0GVK7 77 aa6.22□□□□□ -1.41
SMARCD3-208ENST00000472789 MOBPQ13875 183 aa6.22□□□□□ -1.41
SMARCD3-208ENST00000472789 IGFL1Q6UW32 110 aa6.21□□□□□ -1.42
SMARCD3-208ENST00000472789 KRTAP13-2Q52LG2 175 aa6.2□□□□□ -1.42
SMARCD3-208ENST00000472789 Q6Q795 121 aa6.2□□□□□ -1.42
SMARCD3-208ENST00000472789 C4orf48Q5BLP8 95 aa6.19□□□□□ -1.42
SMARCD3-208ENST00000472789 CD164Q04900 197 aa6.18□□□□□ -1.42
SMARCD3-208ENST00000472789 UBL5Q9BZL1 73 aa6.18□□□□□ -1.42
SMARCD3-208ENST00000472789 LINC00304Q8N9R0 145 aa6.17□□□□□ -1.42
SMARCD3-208ENST00000472789 A0A1W2PNM2 257 aa6.16□□□□□ -1.42
SMARCD3-208ENST00000472789 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
SMARCD3-208ENST00000472789 SS18L2Q9UHA2 77 aa6.16□□□□□ -1.42
SMARCD3-208ENST00000472789 NREPQ16612 68 aa6.15□□□□□ -1.42
SMARCD3-208ENST00000472789 TRBV7-7A0A0K0K1E9 115 aa6.14□□□□□ -1.43
SMARCD3-208ENST00000472789 SPINK1P00995 79 aa6.13□□□□□ -1.43
SMARCD3-208ENST00000472789 LINC00846Q9NV44 126 aa6.13□□□□□ -1.43
SMARCD3-208ENST00000472789 A0A087WSZ3 146 aa6.12□□□□□ -1.43
SMARCD3-208ENST00000472789 A0A0G2JQZ4 141 aa6.12□□□□□ -1.43
SMARCD3-208ENST00000472789 HRCT1Q6UXD1 115 aa6.12□□□□□ -1.43
SMARCD3-208ENST00000472789 LIMD2Q9BT23 127 aa6.12□□□□□ -1.43
SMARCD3-208ENST00000472789 RPS29P62273 56 aaKnown RBP6.1□□□□□ -1.43
SMARCD3-208ENST00000472789 PRR4Q16378 134 aa6.1□□□□□ -1.43
SMARCD3-208ENST00000472789 LINC00643Q86TS7 51 aa6.1□□□□□ -1.43
SMARCD3-208ENST00000472789 LPAP08519 4548 aa6.09□□□□□ -1.43
SMARCD3-208ENST00000472789 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
SMARCD3-208ENST00000472789 Q6ZVQ6 151 aa6.09□□□□□ -1.43
SMARCD3-208ENST00000472789 Q5XG85 94 aa6.08□□□□□ -1.44
SMARCD3-208ENST00000472789 J3KT08 172 aa6.07□□□□□ -1.44
SMARCD3-208ENST00000472789 BPY2O14599 106 aa6.07□□□□□ -1.44
SMARCD3-208ENST00000472789 RETNLBQ9BQ08 111 aa6.07□□□□□ -1.44
SMARCD3-208ENST00000472789 ASB16-AS1Q495Z4 193 aa6.06□□□□□ -1.44
SMARCD3-208ENST00000472789 CDIP1Q9H305 208 aa6.06□□□□□ -1.44
SMARCD3-208ENST00000472789 CXCL6P80162 114 aa6.05□□□□□ -1.44
SMARCD3-208ENST00000472789 SIGMAR1Q99720 223 aa6.05□□□□□ -1.44
SMARCD3-208ENST00000472789 MUC2Q02817 5179 aa6.03□□□□□ -1.44
SMARCD3-208ENST00000472789 NDUFB1O75438 58 aa6.03□□□□□ -1.44
SMARCD3-208ENST00000472789 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms