RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TRBV6-7A0A0A0MS04 114 aa1.07□□□□□ -2.24
XRN1-210ENST00000472697 A8MTW9 85 aa1.07□□□□□ -2.24
XRN1-210ENST00000472697 IGHV3-33P01772 117 aa1.07□□□□□ -2.24
XRN1-210ENST00000472697 FXYD6P3P58550 94 aa1.07□□□□□ -2.24
XRN1-210ENST00000472697 HMGN3Q15651 99 aa1.07□□□□□ -2.24
XRN1-210ENST00000472697 A0A1W2PPM0 123 aa1.06□□□□□ -2.24
XRN1-210ENST00000472697 PKIAP61925 76 aa1.06□□□□□ -2.24
XRN1-210ENST00000472697 LCE1CQ5T751 118 aa1.06□□□□□ -2.24
XRN1-210ENST00000472697 LCE1BQ5T7P3 118 aa1.06□□□□□ -2.24
XRN1-210ENST00000472697 FXYD1O00168 92 aa1.06□□□□□ -2.24
XRN1-210ENST00000472697 GNGT2O14610 69 aa1.06□□□□□ -2.24
XRN1-210ENST00000472697 DEFB131AP59861 70 aa1.06□□□□□ -2.24
XRN1-210ENST00000472697 OR10AG1Q8NH19 301 aa1.06□□□□□ -2.24
XRN1-210ENST00000472697 TMEM167AQ8TBQ9 72 aa1.06□□□□□ -2.24
XRN1-210ENST00000472697 LEAP2Q969E1 77 aa1.06□□□□□ -2.24
XRN1-210ENST00000472697 RHPN1-AS1Q9BWJ2 59 aa1.06□□□□□ -2.24
XRN1-210ENST00000472697 DEFB4AO15263 64 aa1.05□□□□□ -2.24
XRN1-210ENST00000472697 UBE2D1P51668 147 aa1.05□□□□□ -2.24
XRN1-210ENST00000472697 SNRPGP62308 76 aaKnown RBP1.05□□□□□ -2.24
XRN1-210ENST00000472697 ASB16-AS1Q495Z4 193 aa1.05□□□□□ -2.24
XRN1-210ENST00000472697 SPINK6Q6UWN8 80 aa1.05□□□□□ -2.24
XRN1-210ENST00000472697 S100A13Q99584 98 aa1.05□□□□□ -2.24
XRN1-210ENST00000472697 FAM103A1Q9BTL3 118 aaKnown RBP1.05□□□□□ -2.24
XRN1-210ENST00000472697 ATG5Q9H1Y0 275 aa1.05□□□□□ -2.24
XRN1-210ENST00000472697 TRAV13-2A0A0B4J235 113 aa1.05□□□□□ -2.24
XRN1-210ENST00000472697 HTN3P15516 51 aa1.05□□□□□ -2.24
XRN1-210ENST00000472697 PRCDQ00LT1 54 aa1.05□□□□□ -2.24
XRN1-210ENST00000472697 LINC01556Q5JQF7 62 aa1.05□□□□□ -2.24
XRN1-210ENST00000472697 RPL7L1Q6DKI1 246 aaKnown RBP1.05□□□□□ -2.24
XRN1-210ENST00000472697 BET1LQ9NYM9 111 aa1.05□□□□□ -2.24
XRN1-210ENST00000472697 A6NIN4 97 aa1.04□□□□□ -2.24
XRN1-210ENST00000472697 SPANXN1Q5VSR9 72 aa1.04□□□□□ -2.24
XRN1-210ENST00000472697 C8orf59Q8N0T1 100 aaPredicted RBP1.04□□□□□ -2.24
XRN1-210ENST00000472697 TIMM8BQ9Y5J9 83 aaPredicted RBP1.04□□□□□ -2.24
XRN1-210ENST00000472697 GNG11P61952 73 aa1.04□□□□□ -2.24
XRN1-210ENST00000472697 TMEM263Q8WUH6 116 aaKnown RBP1.04□□□□□ -2.24
XRN1-210ENST00000472697 RPRMQ9NS64 109 aa1.04□□□□□ -2.24
XRN1-210ENST00000472697 CACFD1Q9UGQ2 172 aa1.04□□□□□ -2.24
XRN1-210ENST00000472697 C22orf24Q9Y442 160 aa1.04□□□□□ -2.24
XRN1-210ENST00000472697 TRBV10-1A0A0K0K1A3 114 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 RPS27P42677 84 aaKnown RBP1.03□□□□□ -2.24
XRN1-210ENST00000472697 GNG2P59768 71 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 SPATA45Q537H7 98 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 ACBD7Q8N6N7 88 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 TMEM14CQ9P0S9 112 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 RABAC1Q9UI14 185 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 USH2AO75445 5202 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 MUC19Q7Z5P9 8384 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 KMT2DO14686 5537 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 LRP2P98164 4655 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 LOC110117498A0A087WWA1 95 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 TMEM14DPA8MWL7 114 aa1.03□□□□□ -2.24
XRN1-210ENST00000472697 A0A096LPF7 62 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 IGLC7A0M8Q6 106 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 INE1O15225 51 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 CFDP00746 253 aaPredicted RBP1.02□□□□□ -2.25
XRN1-210ENST00000472697 TRAPPC2P0DI81 140 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 TRAPPC2BP0DI82 140 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 PIGYQ3MUY2 71 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 RPL39P5Q59GN2 51 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 PSMG4Q5JS54 123 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 COL5A1-AS1Q5SY13 56 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 KRTAP5-10Q6L8G5 202 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 PRO0255Q9UI72 69 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 HIGD1CA8MV81 97 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 TMEM262E9PQX1 116 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 IGHV3-30P01768 117 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 IGHV3-30-5P0DP03 117 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 CYP2G1PQ6ZSU1 146 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 C9orf62Q8N4C0 152 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 DMAC1Q96GE9 116 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 FCGBPQ9Y6R7 5405 aaPredicted RBP1.02□□□□□ -2.25
XRN1-210ENST00000472697 UBE2L5PA0A1B0GUS4 154 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 K7EIM0 57 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 DEFB130BP0DP73 79 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 DEFB130AP0DP74 79 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 ELOF1P60002 83 aaKnown RBP1.02□□□□□ -2.25
XRN1-210ENST00000472697 UBE2L3P68036 154 aaKnown RBP1.02□□□□□ -2.25
XRN1-210ENST00000472697 Q0VG73 95 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 C5orf38Q86SI9 138 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 SPANXDQ9BXN6 97 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 KRTAP2-1Q9BYU5 128 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 MANBALQ9NQG1 85 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 PLAC8Q9NZF1 115 aa1.02□□□□□ -2.25
XRN1-210ENST00000472697 MUC17Q685J3 4493 aa1.01□□□□□ -2.25
XRN1-210ENST00000472697 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.01□□□□□ -2.25
XRN1-210ENST00000472697 A0A087WWC5 75 aa1.01□□□□□ -2.25
XRN1-210ENST00000472697 FAM24AA6NFZ4 105 aa1.01□□□□□ -2.25
XRN1-210ENST00000472697 PRH1P02810 166 aa1.01□□□□□ -2.25
XRN1-210ENST00000472697 COX7B2Q8TF08 81 aa1.01□□□□□ -2.25
XRN1-210ENST00000472697 I3L2K1 104 aa1.01□□□□□ -2.25
XRN1-210ENST00000472697 M0R3E3 92 aa1.01□□□□□ -2.25
XRN1-210ENST00000472697 DEFA5Q01523 94 aa1.01□□□□□ -2.25
XRN1-210ENST00000472697 Q96NJ1 140 aa1.01□□□□□ -2.25
XRN1-210ENST00000472697 NPVFQ9HCQ7 196 aa1.01□□□□□ -2.25
XRN1-210ENST00000472697 NDUFA4L2Q9NRX3 87 aa1.01□□□□□ -2.25
XRN1-210ENST00000472697 NMBP08949 121 aa1□□□□□ -2.25
XRN1-210ENST00000472697 GDF5OSQ5U4N7 250 aa1□□□□□ -2.25
XRN1-210ENST00000472697 Q5VV11 94 aa1□□□□□ -2.25
XRN1-210ENST00000472697 C12orf73Q69YU5 71 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms